MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-233I01
Chromosome	1 (Build37)
Map Location	185,547,809 - 185,548,868
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Capn8, 4922505E12Rik, Susd4, Tlr5, EG666649
Downstream gene	1700056E22Rik, Dusp10, EG433387, EG629032, LOC666714
Link	Open Mouse BAC browser

Click to get alignment info.

name	Capn8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170725 MGI:2181366
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4922505E12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433386 MGI:3618292
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Susd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:96935 MGI:2138351
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tlr5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53791 MGI:1858171
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666649 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666649 MGI:3646554
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	1700056E22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73363 MGI:1920613
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	Dusp10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:63953 MGI:1927070
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG433387 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433387 MGI:3647596
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 42 ESTs, 10 Proteins

name	EG629032 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629032 MGI:3645733
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC666714 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666714
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins pseudo : _no_value

name	Capn8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:18700033 GeneID:170725 MGI:2181366
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calpain 8 transcript_id : NM_130890.1

name	4922505E12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113680843 GeneID:433386 MGI:3618292
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4922505E12 gene transcript_id : NM_001033547.2

name	Susd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802284 GeneID:96935 MGI:2138351
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sushi domain containing 4 transcript_id : NM_144796.3

name	Tlr5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248589 GeneID:53791 MGI:1858171
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : toll-like receptor 5 transcript_id : NM_016928.2

name	EG666649 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94364728 GeneID:666649 MGI:3646554
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG666649 transcript_id : XM_985197.1

name	1700056E22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149247226 GeneID:73363 MGI:1920613
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : RIKEN cDNA 1700056E22 gene transcript_id : XM_484951.4

name	Dusp10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362561 GeneID:63953 MGI:1927070
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual specificity phosphatase 10 transcript_id : NM_022019.3

name	EG433387 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149247229 GeneID:433387 MGI:3647596
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 42 ESTs, 10 Proteins product : predicted gene, EG433387 transcript_id : XM_484952.5

name	EG629032 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149247205 GeneID:629032 MGI:3645733
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG629032 transcript_id : XM_901095.3

name	Capn8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18700034 GeneID:170725 MGI:2181366
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation function : calcium-dependent cysteine protease note : stomach-specific calpain (nCL-2) product : calpain 8 protein_id : NP_570960.1

name	4922505E12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702055 CCDS:CCDS15589.1 GeneID:433386 MGI:3618292
definition	codon_start : 1 product : hypothetical protein LOC433386 protein_id : NP_001028719.1

name	Susd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30061331 CCDS:CCDS15590.1 GeneID:96935 MGI:2138351
definition	codon_start : 1 product : sushi domain containing 4 protein_id : NP_659045.2

name	Tlr5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248590 GeneID:53791 MGI:1858171
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA] codon_start : 1 product : toll-like receptor 5 protein_id : NP_058624.2

name	EG666649 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94364729 GeneID:666649 MGI:3646554
definition	codon_start : 1 product : hypothetical protein protein_id : XP_990291.1

name	1700056E22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82883640 GeneID:73363 MGI:1920613
definition	codon_start : 1 product : hypothetical protein LOC73363 protein_id : XP_484951.2

name	Dusp10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560303 CCDS:CCDS15591.1 GeneID:63953 MGI:1927070
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0017017 - MAP kinase phosphatase activity [Evidence IEA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA] codon_start : 1 product : dual specificity phosphatase 10 protein_id : NP_071302.2

name	EG433387 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82883644 GeneID:433387 MGI:3647596
definition	codon_start : 1 product : hypothetical protein protein_id : XP_484952.3

name	EG629032 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149247206 GeneID:629032 MGI:3645733
definition	codon_start : 1 product : hypothetical protein protein_id : XP_906188.3

name	(CDS detail)
type	STS
link
xref	UniSTS:124546
definition	standard_name : RH118246

name	(CDS detail)
type	STS
link
xref	UniSTS:162985
definition	standard_name : RH126277

name	(CDS detail)
type	STS
link
xref	UniSTS:125499
definition	standard_name : N28096

name	(CDS detail)
type	STS
link
xref	UniSTS:178535
definition	standard_name : AI848994

name	(CDS detail)
type	STS
link
xref	UniSTS:234286
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:479048
definition	standard_name : Tlr5

name	(CDS detail)
type	STS
link
xref	UniSTS:270622
definition	standard_name : PMC133006P2

name	(CDS detail)
type	STS
link
xref	UniSTS:271724
definition	standard_name : PMC187346P1

name	(CDS detail)
type	STS
link
xref	UniSTS:166559
definition	standard_name : Tlr5

name	(CDS detail)
type	STS
link
xref	UniSTS:178538
definition	standard_name : AW050000

name	(CDS detail)
type	STS
link
xref	UniSTS:234296
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:255202
definition	standard_name : Z7139

name	(CDS detail)
type	STS
link
xref	UniSTS:158901
definition	standard_name : 33.MMHAP31FLC6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:178545
definition	standard_name : AI158871

name	(CDS detail)
type	STS
link
xref	UniSTS:224623
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128621
definition	standard_name : D1Mit272

name	LOC666714 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149247209 GeneID:666714
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins product : similar to hCG2016451 pseudo : _no_value transcript_id : XR_030594.1

clone name	MSMg01-288O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206B22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-233I01.b	B6Ng01-233I01.g
ACC	GA045542	GA045543
length	1,065	1,194
definition	B6Ng01-233I01.b	B6Ng01-233I01.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gattcagcttcccaagacaaactacatagccagcctcctgcaagccttgc tgaggataggacctctactataagcagaggtctggagacagaggcaggag taagactgagtatgatctcaaccagcggctacaaaaccttcctttcccag cctcaccatatccagagcccctggctctgagaggaagggtagggtctgat cccaccttggccttgatatgtcctgtagccagcccaatggaaggagactc atgccagagttctgagccaagcccactctgtgccatatgtcagacatcca ccggacaagaaatgtctggagacctttggtctatcacatctccccagatc tgacactcacttgcctccttgggggagcagagacccatgtctcctttaca taataccagtcaacttgatgtgcccaggctgacaaccctctctacttctt tggccaggggtggaaatttcaactgtgatattatcagcagaggctctatc tatgcgaagttgaactgtgtcttgcagtaagtgtccccatgcaggggtcc agagatggcttactccaacctgacctatgcggatccttgtgttctgtctt catagcaacagctcttagctgctttagaaccataaccctcaactggcaca gaagccaagccacctacctccaggtcactgctgtgtgtgatgactccact gctgagtatttacttggggagcttaggagtctcctcctccatcagaagtt tgttctcacgtcaggagatgggcagcgcctgcctctgtggctccctgaaa gagacatgcctcttacagcacttgctccgatggaattccctgagaaggtc agaaaactcacagccaggagactggtaatgtagctcagacagtaaagtgc taacctatcatgcacaaagcccaggatccatcatggaagcattgcagaaa ctgagcatggtgatgcacacctgtttatttctagttcctcaggagagagc tagatcatcactaggtacccagagaagctgaaagtccacctggatatggg aagccctggtggcaa	gaattctcatattggttccctgaactgtagagtgagggctattatggttg gaaaggccaaatggaagcctttagagttgcctctgccaaagaaaatagtg aatcaaaaacagtatcgtattcctggaggaattgcagaaattactgccac tatcaaggacttgaaagatgcaggggtggtggttcccactacatctccgt ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg acagttgattaccgaaaactaaatcaggtagtaactccaattgcagctgc tgtaccagatgtagtttcgttacttgagcaaattaacacatctcctggca cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc acattggtgcactatattgatgacattatgctgattggaccaagtgagca ggaagtagcaaccactttggactcattggtaacacatatgcgtatcagag gatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaaa ttcttaggagtccagtggtgtgggggcatgcagagatattccttctaagg tgaaagataagttattgcacctagcccctcctacaaccaagaaagaagca caacgtttagtgggtctatttggattctggagacaacacatccctcactt gggtgtgttacttaggcctatttaccaagtgactcggaaagctgctagct ttgtgtggggcctggaacaggagaaggcccttcaacagggtccaggctgc tgtgcaagctgctctaccacttggaaccatatgacccagcagaaccgatg gtacttgaaggtgtctgtggctgataagagaatgctgtttggagcctctg gcaagcccttgtagtgaatcacaagaataaaaacttttgggatttggagc taagctccttgcccattcattctgcagaacaactattcttcctatgaaaa acgagctcttctgtgcctgctgcataattgtggtgcgctcatat
quality values	Open. Hide. 58 49 23 58 26 16 42 58 58 62 62 62 33 25 62 62 47 42 42 54 62 62 62 62 47 42 62 62 62 62 47 31 62 62 62 56 56 56 56 62 59 59 62 62 62 62 62 62 62 62 62 62 59 59 62 59 46 62 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 59 59 59 62 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 59 59 62 62 59 59 59 62 59 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 59 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 49 47 47 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 47 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 62 42 62 62 62 62 54 62 62 62 62 62 62 62 62 54 58 58 54 54 58 54 58 52 47 58 58 58 58 58 58 58 58 58 54 58 52 54 58 58 54 54 58 52 54 58 58 58 52 58 58 54 54 38 58 58 58 58 58 58 52 47 58 37 32 41 58 58 40 58 58 52 48 58 58 45 49 54 54 58 58 58 45 41 58 54 47 54 54 54 47 58 47 54 52 58 52 58 54 49 54 52 54 52 54 58 54 54 52 58 49 42 52 49 50 40 47 52 54 37 42 54 54 52 58 53 52 29 51 51 54 50 58 58 34 27 29 58 58 29 51 29 53 52 50 47 41 47 50 47 46 58 50 51 54 51 41 47 48 46 46 58 49 29 49 41 33 58 37 51 54 34 40 47 48 46 49 50 53 39 50 39 40 58 31 41 33 41 40 50 40 50 53 46 58 50 58 41 50 49 21 54 40 41 51 58 48 32 51 42 48 50 50 50 51 29 53 27 17 58 22 32 41 49 50 41 58 58 51 49 26 33 42 47 33 18 44 49 30 30 50 35 17 37 30 21 50 50 39 39 25 42 42 32 24 58 32 24 50 58 41 47 32 52 32 32 31 24 39 37 47 35 25 5 49 33 20 35 25 54 54 29 27 39 33 45 35 26 32 32 42 27 47 39 39 32 51 39 42 54 25 53 29 54 53 42 37 41 54 35 34 53 29 33 15 27 45 42 32 33 28 40 46 51 34 40 32 32 45 37 37 53 42 37 31 34 20 22 21 53 31 23 51 29 9 26 9 7 49 30 35 34 53 20 28 17 15 46 23 33 32 18 47 51 51 34 31 42 39 19 43 28 26 29 43 23 21 14 30 16 31 18 35 31 36 29 31 28 31 43 24 32 28 32 38 30 19 8 33 16 18 23 17 31 48 36 30 29 34 25 36 27 35 27 21 17 29 43 35 24 34 26 14 6 16 18 46 34 30 25 46 10 7 10 17 13 21 26 38 27 36 32 27 32 33 34 14 19 12 31 26 26 25 15 20 14 7 19 48 19 33 26 21 30 14 32 21 21 23 33 26 21 34 22 35 30 14 21 13 30 19 12 21 18 38 9 9 19 31 8 10 23 34 31 42 11 9 10 10 11 9 21 13 19 6 8 6 30 6 17 23 21 9 10 17 28 19 24 23 15 32 20 12 24 25 12 27 23 30 34 9 7 17 5 5 17 27 32 34 13 17 39 8 7 5 14 6 10 19 24 14 19 4 9 9 6 3 3 11 19 14 16 14 23 40 13 12 9 7 9 9 28 8 5 3	Open. Hide. 62 38 39 39 62 62 62 47 47 62 62 42 32 36 21 21 27 21 27 21 34 44 44 62 62 62 62 62 62 62 62 62 62 62 62 62 49 43 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 59 51 59 56 43 43 43 54 43 54 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 50 50 52 62 47 51 62 62 62 54 43 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 54 54 54 58 58 46 58 58 58 48 58 54 58 58 58 54 58 58 58 58 52 38 49 58 51 58 58 45 38 39 42 54 54 58 58 58 52 58 54 58 54 58 54 58 54 54 58 54 58 58 49 58 58 54 50 50 58 58 58 58 41 58 58 34 50 49 51 51 51 58 58 58 58 54 39 58 58 51 54 34 42 38 49 54 53 47 58 50 58 53 29 58 51 58 40 52 47 46 49 48 50 50 49 52 58 58 58 51 41 51 58 29 51 52 46 54 51 41 49 41 39 58 51 40 43 39 51 53 53 53 53 53 58 53 53 47 28 17 32 16 33 33 25 50 58 43 58 58 52 42 33 58 27 52 50 51 35 52 39 49 37 58 58 50 46 48 41 24 52 42 54 28 12 54 37 53 53 39 34 37 54 49 39 37 39 47 45 45 54 32 35 54 42 34 49 39 18 38 51 30 37 33 47 33 45 40 51 54 49 52 45 37 54 54 54 40 37 37 45 42 40 40 21 53 24 41 34 32 53 43 45 53 32 53 45 29 16 29 11 25 25 40 47 51 52 32 53 19 36 34 24 31 49 31 41 33 17 30 32 31 47 36 35 17 21 40 37 28 32 36 31 31 28 32 17 25 30 40 30 53 26 34 51 33 26 45 27 15 31 29 30 24 33 31 26 21 46 32 42 30 27 38 46 51 29 31 36 30 13 46 14 14 33 31 20 14 31 25 38 28 42 27 31 25 25 16 25 31 42 31 27 29 42 31 31 14 15 20 11 44 29 48 42 22 32 22 31 21 34 36 31 12 23 9 6 9 24 23 20 16 31 47 6 15 33 35 12 16 22 35 31 26 25 35 27 11 23 39 48 44 16 33 43 31 31 30 24 24 31 41 46 32 31 31 29 29 38 44 48 20 8 31 18 21 18 8 9 18 20 15 15 36 14 32 33 12 16 22 33 14 32 27 16 8 11 11 7 5 24 19 36 18 18 31 31 16 15 11 16 21 19 29 15 17 21 10 8 20 23 32 21 18 24 23 23 19 22 12 21 32 26 25 10 19 9 13 7 15 16 31 27 30 21 17 11 27 17 15 8 13 20 10 15 23 29 17 8 22 13 17 15 8 16 15 11 23 17 12 9 25 11 20 9 5 7 5 7 6 6 22 11 11 20 21 5 5 7 5 6 10 20 24 24 13 28 8 5 3 20 8 13 7 19 5 19 4 9 11 16 9 16 9 9 6 10 3 19 18 6 5 6 12 22 17 4 6 17 8 9 4 6 7 5 6 4 14 18 4 10 5 3 6 13 11 4 6 17 10 12 11 12 5 8 28 14 7 5 14 5 8 4 16 18 5 11 5 6 5 6 6 4 7 23 11 10 19 13 5 10 5 4 4 10 9 7 5 4 19 5 11 6 8 3 2 4 13 7 7 8 9 12 5 3 2 3 3 3 13 8 17 7 5 6 4 3 6 12 13 18 15 4 4 8 7 9 7 8 8 9 5 4 3 5 4 12 4 7 16 5 6 5 5 17 6 7 8 9 6 4 5 1 3 1 2

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_185547809_185548868
seq2: B6Ng01-233I01.b_49_1112 (reverse)

seq1  TTGCCA-CAGGGGCTCCCATATCCCAGGTGGACCTTCAGC-TCTCTGGGT  48
      |||||| |||||  |||||||| |||||||||| |||||| |||||||||
seq2  TTGCCACCAGGGCTTCCCATAT-CCAGGTGGACTTTCAGCTTCTCTGGGT  49

seq1  ACCTAGTGATGATCTTAGCTCTCTCCTGA-GAACTAGAA--TAACAGGTG  95
      |||||||||||||| |||||||||||||| |||||||||   ||||||||
seq2  ACCTAGTGATGATC-TAGCTCTCTCCTGAGGAACTAGAAATAAACAGGTG  98

seq1  TGCATCACCATGCTCAGTTTCTGCAATGC-TCCATGATGGATCCTGGGCT  144
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGCATCACCATGCTCAGTTTCTGCAATGCTTCCATGATGGATCCTGGGCT  148

seq1  TTGTGCATGATAGGTTAGCACTTTACTGTCTGAGCTACATTACCAGTCTC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCATGATAGGTTAGCACTTTACTGTCTGAGCTACATTACCAGTCTC  198

seq1  CTGGCTGTGAGTTTTCTGACCTTCTCAGGGAATTCCATCGGAGCAAGTGC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGTGAGTTTTCTGACCTTCTCAGGGAATTCCATCGGAGCAAGTGC  248

seq1  TGTAAGAGGCATGTCTCTTTCAGGGAGCCACAGAGGCAGGCGCTGCCCAT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGAGGCATGTCTCTTTCAGGGAGCCACAGAGGCAGGCGCTGCCCAT  298

seq1  CTCCTGACGTGAGAACAAACTTCTGATGGAGGAGGAGACTCCTAAGCTCC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGACGTGAGAACAAACTTCTGATGGAGGAGGAGACTCCTAAGCTCC  348

seq1  CCAAGTAAATACTCAGCAGTGGAGTCATCACACACAGCAGTGACCTGGAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTAAATACTCAGCAGTGGAGTCATCACACACAGCAGTGACCTGGAG  398

seq1  GTAGGTGGCTTGGCTTCTGTGCCAGTTGAGGGTTATGGTTCTAAAGCAGC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTGGCTTGGCTTCTGTGCCAGTTGAGGGTTATGGTTCTAAAGCAGC  448

seq1  TAAGAGCTGTTGCTATGAAGACAGAACACAAGGATCCGCATAGGTCAGGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGCTGTTGCTATGAAGACAGAACACAAGGATCCGCATAGGTCAGGT  498

seq1  TGGAGTAAGCCATCTCTGGACCCCTGCATGGGGACACTTACTGCAAGACA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTAAGCCATCTCTGGACCCCTGCATGGGGACACTTACTGCAAGACA  548

seq1  CAGTTCAACTTCGCATAGATAGAGCCTCTGCTGATAATATCACAGTTGAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCAACTTCGCATAGATAGAGCCTCTGCTGATAATATCACAGTTGAA  598

seq1  ATTTCCACCCCTGGCCAAAGAAGTAGAGAGGGTTGTCAGCCTGGGCACAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCACCCCTGGCCAAAGAAGTAGAGAGGGTTGTCAGCCTGGGCACAT  648

seq1  CAAGTTGACTGGTATTATGTAAAGGAGACATGGGTCTCTGCTCCCCCAAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTGACTGGTATTATGTAAAGGAGACATGGGTCTCTGCTCCCCCAAG  698

seq1  GAGGCAAGTGAGTGTCAGATCTGGGGAGATGTGATAGACCAAAGGTCTCC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAGTGAGTGTCAGATCTGGGGAGATGTGATAGACCAAAGGTCTCC  748

seq1  AGACATTTCTTGTCCGGTGGATGTCTGACATATGGCACAGAGTGGGCTTG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTTCTTGTCCGGTGGATGTCTGACATATGGCACAGAGTGGGCTTG  798

seq1  GCTCAGAACTCTGGCATGAGTCTCCTTCCATTGGGCTGGCTACAGGACAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAACTCTGGCATGAGTCTCCTTCCATTGGGCTGGCTACAGGACAT  848

seq1  ATCAAGGCCAAGGTGGGATCAGACCCTACCCTTCCTCTCAGAGCCAGGGG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGCCAAGGTGGGATCAGACCCTACCCTTCCTCTCAGAGCCAGGGG  898

seq1  CTCTGGATATGGTGAGGCTGGGAAAGGAAGGTTTTGTAGCCGCTGGTTGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGATATGGTGAGGCTGGGAAAGGAAGGTTTTGTAGCCGCTGGTTGA  948

seq1  GATCATACTCAGTCTTACTCCTGCCTCTGTCTCCAGACCTCTGCTTATAG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATACTCAGTCTTACTCCTGCCTCTGTCTCCAGACCTCTGCTTATAG  998

seq1  TAGAGGTCCTATCCTCAGCAAGGCTTGCAGGAGGCTGGCTATGTAGTTTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGTCCTATCCTCAGCAAGGCTTGCAGGAGGCTGGCTATGTAGTTTG  1048

seq1  TCTTGGGAAGCTGAAT  1060
      ||||||||||||||||
seq2  TCTTGGGAAGCTGAAT  1064

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information