gaattcatttactttatttattcatattcaatttagtcaatgcactggga
aagtggaaggtgaataaaatatgtgcactgcagaaatcacattatttaga
tagtgtgtgaatttctcatttacccaatgctatcctaatctaatacatac
catagtgtattaaataaacactgaaaacttggtaataaattttcatttgt
caatttcaagaggtagcatggaaatattttatttgaatattacaattaga
attgggttataaatttaggtatgaaaatttaaaaacatttccatattttt
tctaggcccttattcatttatctgcaactgaataccagcctctgtggtga
aaccaagaattatctcttaaggaacaaagactctgaactaatttcttttt
ccacatacttcttccacatttcattttatgtctgagctgtcattgtctct
agtgattatattagctgattcatagaatctaattctctttaagaataaaa
ttcagctttgattcttaggtcttgttgtgatttattaaatatttttctga
catttttctttgagaagttattctcaaaccactcaatgactttgatttat
tttttcatcatttacaagggacttattctattcaatgtgataattataag
cctttgataaactaagtaaaattttgcatatttgtgtctgttaatcaatt
ccttttaaagttagcacagtttcattttttttctgagtaattaaccagtt
tcaaaaacaccaaatctttgcttttgtcttgtgttacaatattacaaatt
ataaattctacacataacttaacaagcttatgtttgataaatttataatt
tacatcatacatattttaaagtacttaaaacctttcaatataaataatta
atggaagcagttatgttaaggatgataaatagttgtaagattttagtcat
ctttactccaattacactctgaaatctcaaatccttccttgtctgatctg
cattgaagaattattactgtgcataagaaaatgtttcagaaagtgatagt
atgatgaaaaataacatattttttggtagccaaaatgattagaaa

gaattctttgttcagttctgagccccatttttaaatgggattatttgatt
ttctggaatccatcttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgaaggtgtcttttgccttgtagaagctttgcagtttca
tgaggtcacatttgtccattcgcgatcttacagcacaagctcaattcttc
aacgaattagaaagagcaatctgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaagataaaagaacctgtggtggaatca
ccatgcctgatctaaagctgtactacagagcaattgtgttaaaaactgca
tggtactggtatactgacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaaatggtgctgg
tacaactgttttttatcatgtagaagaatgcgaattgatccattccttga
aatatttctatgtaattatttatttacacctaatatatctctgtaaaatt
tgcatctgaataattacattaatatattactgtacccaatcaaggggaaa
tagaccaaaagtctagcgactgaatgaggaaacaagttaccatatatcca
cttagactattattaagcagtaaaagcaggtgaagagtggtggtcttgct
attatatgtgggaaaaatattcaataaagaatcaagacacaaaacgacaa
agtatgttttgttttatgaaaagtgatgtaaggctaagtgttttcccatt
tctaattctgtctaatttttttttaatttttagtgatggataagtgccta
aatttatt

seq1: chr1_29995125_29996217
seq2: B6Ng01-234A07.b_47_1141

seq1  GAATTCATTTACTTTATTTATTCATATTCAATTTAGTCAATGCACTGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTACTTTATTTATTCATATTCAATTTAGTCAATGCACTGGGA  50

seq1  AAGTGGAAGGTGAATAAAATATGTGCACTGCAGAAATCACATTATTTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGAAGGTGAATAAAATATGTGCACTGCAGAAATCACATTATTTAGA  100

seq1  TAGTGTGTGAATTTCTCATTTACCCAATGCTATCCTAATCTAATACATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTGTGAATTTCTCATTTACCCAATGCTATCCTAATCTAATACATAC  150

seq1  CATAGTGTATTAAATAAACACTGAAAACTTGGTAATAAATTTTCATTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGTATTAAATAAACACTGAAAACTTGGTAATAAATTTTCATTTGT  200

seq1  CAATTTCAAGAGGTAGCATGGAAATATTTTATTTGAATATTACAATTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCAAGAGGTAGCATGGAAATATTTTATTTGAATATTACAATTAGA  250

seq1  ATTGGGTTATAAATTTAGGTATGAAAATTTAAAAACATTTCCATATTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGTTATAAATTTAGGTATGAAAATTTAAAAACATTTCCATATTTTT  300

seq1  TCTAGGCCCTTATTCATTTATCTGCAACTGAATACCAGCCTCTGTGGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGCCCTTATTCATTTATCTGCAACTGAATACCAGCCTCTGTGGTGA  350

seq1  AACCAAGAATTATCTCTTAAGGAACAAAGACTCTGAACTAATTTCTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAGAATTATCTCTTAAGGAACAAAGACTCTGAACTAATTTCTTTTT  400

seq1  CCACATACTTCTTCCACATTTCATTTTATGTCTGAGCTGTCATTGTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATACTTCTTCCACATTTCATTTTATGTCTGAGCTGTCATTGTCTCT  450

seq1  AGTGATTATATTAGCTGATTCATAGAATCTAATTCTCTTTAAGAATAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTATATTAGCTGATTCATAGAATCTAATTCTCTTTAAGAATAAAA  500

seq1  TTCAGCTTTGATTCTTAGGTCTTGTTGTGATTTATTAAATATTTTTCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTTTGATTCTTAGGTCTTGTTGTGATTTATTAAATATTTTTCTGA  550

seq1  CATTTTTCTTTGAGAAGTTATTCTCAAACCACTCAATGACTTTGATTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCTTTGAGAAGTTATTCTCAAACCACTCAATGACTTTGATTTAT  600

seq1  TTTTTCATCATTTACAAGGGACTTATTCTATTCAATGTGATAATTATAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATCATTTACAAGGGACTTATTCTATTCAATGTGATAATTATAAG  650

seq1  CCTTTGATAAACTAAGTAAAATTTTGCATATTTGTGTCTGTTAATCAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGATAAACTAAGTAAAATTTTGCATATTTGTGTCTGTTAATCAATT  700

seq1  CCTTTTAAAGTTAGCACAGTTTCATTTTTTTTCTGAGTAATTAACCAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAAAGTTAGCACAGTTTCATTTTTTTTCTGAGTAATTAACCAGTT  750

seq1  TCAAAAACACCAAATCTTTGCTTTTGTCTTGTGTTACAATATTACAAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAACACCAAATCTTTGCTTTTGTCTTGTGTTACAATATTACAAATT  800

seq1  ATAAATTCTACACATAACTTAACAAGCTTATGTTTGATAAATTTATAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTCTACACATAACTTAACAAGCTTATGTTTGATAAATTTATAATT  850

seq1  TACATCATACATATTTTAAAGTACTTAAAACCTTTCAATATAAATAATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCATACATATTTTAAAGTACTTAAAACCTTTCAATATAAATAATTA  900

seq1  ATGGAAGCAGGTTATGTTAAGGATGATAAATAGTTGTAAGATTTTAGTCA  950
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGCA-GTTATGTTAAGGATGATAAATAGTTGTAAGATTTTAGTCA  949

seq1  TCTTTACTCCAATTACACTCTGATATCTCAAATCCTT-CTTGTCTGATCT  999
      ||||||||||||||||||||||| ||||||||||||| ||||||||||||
seq2  TCTTTACTCCAATTACACTCTGAAATCTCAAATCCTTCCTTGTCTGATCT  999

seq1  GCATTGAAGAATTATTACTGTGCATAAG-AAGTGTTTCAGAAGGTGATAG  1048
      |||||||||||||||||||||||||||| || |||||||||| |||||| 
seq2  GCATTGAAGAATTATTACTGTGCATAAGAAAATGTTTCAGAAAGTGATA-  1048

seq1  GTATGATG-AAAATAACAT-TATTTTGGTAGCAAATATGATTAGAAA  1093
      |||||||| |||||||||| | |||||||||| || |||||||||||
seq2  GTATGATGAAAAATAACATATTTTTTGGTAGCCAAAATGATTAGAAA  1095

seq1: chr5_9814107_9814578
seq2: B6Ng01-234A07.g_133_643 (reverse)

seq1  TCTTCTACATGATAACTGCCAGTTGTGCCAGCACCATTTATTGAAAATGC  50
      |||||||||||||||    ||||||| |||||||||||| ||||||||||
seq2  TCTTCTACATGATAAAAAACAGTTGTACCAGCACCATTTGTTGAAAATGC  50

seq1  TGCCTTTTTTCCACTGGATGGTTTTTGCTCCCTTGTCAACGATCAAGTGA  100
      || |||| ||||||||||||||||| ||||||||||| | ||||||||||
seq2  TGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGA  100

seq1  CGATAGGTGCTTGGGTTCATTTTTGGGTCGTCAATTCTATTCCATTGGTC  150
      | |||||||  ||||||||||| |||||| ||||||||||||||||||||
seq2  CCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTC  150

seq1  TACTTGTCTGTCGCTATACCAGTATCATGCAGTTTTTATCACAATTGCTC  200
      ||||||||||||  |||||||||| ||||||||||||| |||||||||||
seq2  TACTTGTCTGTCAGTATACCAGTACCATGCAGTTTTTAACACAATTGCTC  200

seq1  TGTAGTACAGCTTTAGGTCAGTCCTGGTGATTCTACCAGAGGTTCTT---  247
      |||||||||||||||| |||| | ||||||||| |||| ||||||||   
seq2  TGTAGTACAGCTTTAGATCAGGCATGGTGATTCCACCACAGGTTCTTTTA  250

seq1  -----------AATTT-----------------------------CTGAA  257
                 | |||                              ||||
seq2  TCTTTGAGAAGAGTTTTTGCTATCCTAGGTTTTTTGTTATTCCAGATGAA  300

seq1  T----AGA-------------------ACAGCAATG-GCTTGTACTGTAA  283
      |    |||                     || | || |||||| ||||||
seq2  TTTGCAGATTGCTCTTTCTAATTCGTTGAAGAATTGAGCTTGTGCTGTAA  350

seq1  GATTGAGAATCGACAAATGGGATCTCATAAAATTGCAAAGCTTTTGCAAG  333
      ||| | |||| |||||||| || ||||| ||| |||||||||| | ||||
seq2  GATCGCGAATGGACAAATGTGACCTCATGAAACTGCAAAGCTTCTACAAG  400

seq1  GCAAAAGACACCGTCAATAAGACAAAGAGGCCACCAACAGATTGGGAAAG  383
      |||||||||||| ||||||||||||| || ||||||||||||||||||||
seq2  GCAAAAGACACCTTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAG  450

seq1  GATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCTAGTATCTAGT  433
      |||||||||||||||||||||||||||||||||||||||           
seq2  GATCTTTACCTATCCTAAATCAGATAGGGGACTAATATC-----------  489

seq1  ATCTAATGTCTTTATATCTTTATATATAAAGAACTCAAG  472
                       |  |||||||||||||||||||
seq2  -----------------CAATATATATAAAGAACTCAAG  511