BAC Information

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BAC

Clone NameB6Ng01-234P09
Chromosome1 (Build37)
Map Location 47,584,803 - 47,585,973
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc39a10, EG227061
Downstream geneLOC666869, LOC546734, LOC674566
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234P09.bB6Ng01-234P09.g
ACCGA046566GA046567
length1,2081,158
definitionB6Ng01-234P09.b B6Ng01-234P09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtcaagctaagaagtttctgtgtaatgtaggaatccagtaatg
cactgaagagacagcatgtggaaaaatacttagaaagagtacattgtaac
aatgggttattatctaaaatacaacaactcagacaattcaaaagaagaaa
ataaatattcttatttaaaacaggacaaatgattatagtaggtgtctcat
taaaaagacatgaaagcatgatatgtgaaacacccactatcactaacatg
aaaatttaaaacaaaacccccacaagacaactttagcacagctgttacca
aagggaaaaaaattaaaagtggggcagagacatgtataataaacactttc
agaggttgatgcactccagtgcctggcattctcaaaacccaaaatacaga
atcaatctaagtatactctaaaagataaatatttttttaaaagttgtact
ctatatataatttgacactggtaaaaggcctaagttcacaaaagtctatc
atgaaacacttctatgtatacataaaacattttattcttgaaatcatgat
aaattgaaggtaaatttttctttttttttaaattttttatagatattttc
ttcatttgcatttcaaatgctatctcaaaagtcccctacaccctccccct
gccctgctcccctaccaacccactcccatttcttgaccctggtgttaccc
tgtactggggcatataaagtttacaagaccaaggggcctctcttcccact
gatggccaactaggccatcttctgctacatatgcagctagagacatgagc
tctgaggatattgattagctcatattgttgttccacctatcgggttacag
accccttcagccccagtaaaattttcaaagcacaaaatattaactataca
atataattcacattaattagctacattttaatattccacagtgcacaaat
gcactgaagtaaaatatattaaatgtatttcatcaattaaaattataatt
ttaaatatctaaatgtatgaatgctttgatagttttatcgtcatatgtat
gtatttatgtacgtgtgtatgttatattggtaatttatagaaatatctta
cagctatgactacatagtgccacaagtgctgttttcacacagattgcagg
acctctggatcctcaatgccagcttgaattgtctctcagagagcctctgt
aatcttgg

gaattctctcttacaatgtcaaactctggcaaataccccaggcttttaat
ttttttttaatgtgtgttttgtatgttttgttttgttgagaatgaaagta
ccaatgttagatatcaggtgatagggaatttagttaggtctttggtctac
tgcagcatttgtcacttagtgtctaaatacaaatacataagtaactaagt
gataatattcctggaaaatagaaatagttcatatttaatttaatttcatt
gtatgttttgaccgaattatggctaataaatacatgaaaaccagctattg
gctgagctatgatgagatgaatggctggtatattagtggagcaatagtga
aggagatgtagcatcttagccatctagaaccttaaatcaaaagggtaaac
aaataaatgtctaggactgactgagttattagtcagtgtaaggaagatta
cttgcattccataccctctatattatattataaaacttgtgggtagagat
tgttgaagtctcttgatttttgatcaaaaaatgaaatcatgtagccattt
gtatgtatatataaattctggagtaaattgtctgacttgggatgttattt
ccttctgggaaatgactggtgatccttatcttgaagtcatctacaactac
ttaaaggaatcggactgttgagattgtagtgactaggtcaaagtaaaatg
tgttgattgcttggtgactatgtatttcatttccagcatttgaaaagatc
ttttttagtaaggtcccatgaagtctgtctatgttaatgttctaaaacca
ctaaacgtttaggttcaagattagatagtaacatacagtaaagcttgtga
gatcatagctttaacttatggaaaacattattgtggaaaactttgctaat
taagtttgaagtctatcatttcccagatagccttctggggcttggtgcaa
tatgtagagtctggtcatggacaagcttctcttctctgattttattctgg
ggaattcagtccccccctccacagtgtctacttgcacaatatcacttagc
aatagaatacagtccaacctcttactggataagaccatgagccagcacct
ggagattctgaatgctgccatctatgagcattgtcaataccgtagtcttc
agaccttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_47584803_47585973
seq2: B6Ng01-234P09.g_65_1222

seq1  GAATTCTCTCTTACAATGTCAAACTCTGGCAAATACCCCAGGCTTTTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTTACAATGTCAAACTCTGGCAAATACCCCAGGCTTTTAAT  50

seq1  TTTTTTTTAATGTGTGTTTTGTATGTTTTGTTTTGTTGAGAATGAAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAATGTGTGTTTTGTATGTTTTGTTTTGTTGAGAATGAAAGTA  100

seq1  CCAATGTTAGATATCAGGTGATAGGGAATTTAGTTAGGTCTTTGGTCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTTAGATATCAGGTGATAGGGAATTTAGTTAGGTCTTTGGTCTAC  150

seq1  TGCAGCATTTGTCACTTAGTGTCTAAATACAAATACATAAGTAACTAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCATTTGTCACTTAGTGTCTAAATACAAATACATAAGTAACTAAGT  200

seq1  GATAATATTCCTGGAAAATAGAAATAGTTCATATTTAATTTAATTTCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATATTCCTGGAAAATAGAAATAGTTCATATTTAATTTAATTTCATT  250

seq1  GTATGTTTTGACCGAATTATGGCTAATAAATACATGAAAACCAGCTATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTTTGACCGAATTATGGCTAATAAATACATGAAAACCAGCTATTG  300

seq1  GCTGAGCTATGATGAGATGAATGGCTGGTATATTAGTGGAGCAATAGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCTATGATGAGATGAATGGCTGGTATATTAGTGGAGCAATAGTGA  350

seq1  AGGAGATGTAGCATCTTAGCCATCTAGAACCTTAAATCAAAAGGGTAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATGTAGCATCTTAGCCATCTAGAACCTTAAATCAAAAGGGTAAAC  400

seq1  AAATAAATGTCTAGGACTGACTGAGTTATTAGTCAGTGTAAGGAAGATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATGTCTAGGACTGACTGAGTTATTAGTCAGTGTAAGGAAGATTA  450

seq1  CTTGCATTCCATACCCTCTATATTATATTATAAAACTTGTGGGTAGAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATTCCATACCCTCTATATTATATTATAAAACTTGTGGGTAGAGAT  500

seq1  TGTTGAAGTCTCTTGATTTTTGATCAAAAAATGAAATCATGTAGCCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAGTCTCTTGATTTTTGATCAAAAAATGAAATCATGTAGCCATTT  550

seq1  GTATGTATATATAAATTCTGGAGTAAATTGTCTGACTTGGGATGTTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTATATATAAATTCTGGAGTAAATTGTCTGACTTGGGATGTTATTT  600

seq1  CCTTCTGGGAAATGACTGGTGATCCTTATCTTGAAGTCATCTACAACTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGGGAAATGACTGGTGATCCTTATCTTGAAGTCATCTACAACTAC  650

seq1  TTAAAGGAATCGGACTGTTGAGATTGTAGTGACTAGGTCAAAGTAAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGAATCGGACTGTTGAGATTGTAGTGACTAGGTCAAAGTAAAATG  700

seq1  TGTTGATTGCTTGGTGACTATGTATTTCATTTCCAGCATTTGAAAAGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGATTGCTTGGTGACTATGTATTTCATTTCCAGCATTTGAAAAGATC  750

seq1  TTTTTTAGTAAGGTCCCATGAAGTCTGTCTATGTTAATGTTCTAAAACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAGTAAGGTCCCATGAAGTCTGTCTATGTTAATGTTCTAAAACCA  800

seq1  CTAAACGTTTAGGTTCAAGATTAGATAGTAACATACAGTAAAGCTTGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACGTTTAGGTTCAAGATTAGATAGTAACATACAGTAAAGCTTGTGA  850

seq1  GATCATAGCTTTAACTTATGGAAAACATTATTGTGGAAAACTTTGCTAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATAGCTTTAACTTATGGAAAACATTATTGTGGAAAACTTTGCTAAT  900

seq1  TAAGTTTGAAGTCTATCATTTCCCAGATAGCCTTCTGGGGCTTGGTGCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTGAAGTCTATCATTTCCCAGATAGCCTTCTGGGGCTTGGTGCAA  950

seq1  TATGTAGGAGTCTGGTCATGGACAAGCTTCTCCTTCTCTGATTTTA-TCT  999
      |||||| |||||||||||||||||||||||| |||||||||||||| |||
seq2  TATGTA-GAGTCTGGTCATGGACAAGCTTCT-CTTCTCTGATTTTATTCT  998

seq1  GGGGAATTCAGT-CCCCCCTCCACAGGTGTCTACCTGCACAATATCACTT  1048
      |||||||||||| |||||||||||| |||||||| |||||||||||||||
seq2  GGGGAATTCAGTCCCCCCCTCCACA-GTGTCTACTTGCACAATATCACTT  1047

seq1  AGCATTAGAATACAGGTTCAACTTCCTTTACCTGATAAGAACCCATTGAG  1098
      |||| ||||||||| || |||| ||  ||||  |||||||  ||| ||||
seq2  AGCAATAGAATACA-GTCCAACCTC--TTACTGGATAAGA--CCA-TGAG  1091

seq1  CCAGCACCT-GAGATTCCTGAAATGCTTCCCCATTCTAATGAGGCATTGT  1147
      ||||||||| |||||| ||| |||||| ||    ||| |||| |||||||
seq2  CCAGCACCTGGAGATT-CTG-AATGCTGCC---ATCT-ATGA-GCATTGT  1134

seq1  CAATACCCTAAGTCTTCAG-CCTTG  1171
      ||||||| | ||||||||| |||||
seq2  CAATACCGT-AGTCTTCAGACCTTG  1158


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