MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-235E03
Chromosome	1 (Build37)
Map Location	15,765,507 - 15,916,040
singlet/doublet	doublet
Overlap gene	Terf1, Gm106
Upstream gene	Smt3h2-ps4, EG665407, Trpa1, EG269105, LOC100039949, LOC100039959, Kcnb2, Ppia-ps1_109.1
Downstream gene	LOC665434, 4930444P10Rik, Rpl7, Rdh10, EG665282, Stau2, Ube2w, Tceb1, LOC665480, Tmem70, Ly96, LOC100040056, LOC665496, EG545306
Link	Open Mouse BAC browser

Click to get alignment info.

name	Smt3h2-ps4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114607 MGI:2149598
definition	note : SMT3 suppressor of mif two 3 homolog 2, pseudogene 4 (S. cerevisiae) pseudo : _no_value

name	EG665407 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665407 MGI:3647110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 mRNAs, 1781 ESTs, 11 Proteins

name	Trpa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:277328 MGI:3522699
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG269105 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269105 MGI:3642999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 221 ESTs, 1 Protein

name	LOC100039949 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039949
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100039959 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 87 mRNAs, 1785 ESTs, 24 Proteins pseudo : _no_value

name	Kcnb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98741 MGI:99632
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 13 ESTs, 53 Proteins

name	Ppia-ps1_109.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606528
definition	note : peptidylprolyl isomerase A pseudogene 1_109.1 pseudo : _no_value

name	Terf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21749 MGI:109634
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm106 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226866 MGI:2684952
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665434 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665434
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins

name	4930444P10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75799 MGI:1923049
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Rpl7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19989 MGI:98073
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rdh10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98711 MGI:1924238
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665282 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665282 MGI:3649156
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Stau2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:29819 MGI:1352508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ube2w (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66799 MGI:1914049
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tceb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67923 MGI:1915173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665480 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665480
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Tmem70 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70397 MGI:1915068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ly96 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17087 MGI:1341909
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040056 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040056
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC665496 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665496
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	EG545306 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545306 MGI:3644176
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 108 ESTs, 14 Proteins

name	EG665407 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233616 GeneID:665407 MGI:3647110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 mRNAs, 1781 ESTs, 11 Proteins product : predicted gene, EG665407 transcript_id : XM_976689.2

name	Trpa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348024 GeneID:277328 MGI:3522699
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transient receptor potential cation channel, subfamily A, member 1 transcript_id : NM_177781.3

name	EG269105 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94362765 GeneID:269105 MGI:3642999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 221 ESTs, 1 Protein product : predicted gene, EG269105 transcript_id : XM_886378.2

name	Kcnb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233617 GeneID:98741 MGI:99632
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 13 ESTs, 53 Proteins product : potassium voltage gated channel, Shab-related subfamily, member 2 transcript_id : XM_001473804.1

name	Terf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981960 GeneID:21749 MGI:109634
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : telomeric repeat binding factor 1 transcript_id : NM_009352.2

name	Gm106 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385250 GeneID:226866 MGI:2684952
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 106, (NCBI) transcript_id : NM_001033288.2

name	LOC665434 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233621 GeneID:665434
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins product : similar to Ac2-210 transcript_id : XM_001473920.1

name	4930444P10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94362781 GeneID:75799 MGI:1923049
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : RIKEN cDNA 4930444P10 gene transcript_id : XM_976954.1

name	Rpl7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142360411 GeneID:19989 MGI:98073
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L7 transcript_id : NM_011291.3

name	Rdh10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893004 GeneID:98711 MGI:1924238
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinol dehydrogenase 10 (all-trans) transcript_id : NM_133832.3

name	EG665282 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94362732 GeneID:665282 MGI:3649156
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG665282 transcript_id : XM_977441.1

name	Stau2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142379809 GeneID:29819 MGI:1352508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : staufen (RNA binding protein) homolog 2 (Drosophila) transcript_id : NM_025303.2

name	Ube2w (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802798 GeneID:66799 MGI:1914049
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-conjugating enzyme E2W (putative) transcript_id : NM_025773.2

name	Tceb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364329 GeneID:67923 MGI:1915173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcription elongation factor B (SIII), polypeptide 1 transcript_id : NM_026456.3

name	Tmem70 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117647264 GeneID:70397 MGI:1915068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 70 transcript_id : NM_026392.1

name	Tmem70 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117647262 GeneID:70397 MGI:1915068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 70 transcript_id : NM_027415.2

name	Ly96 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8393736 GeneID:17087 MGI:1341909
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lymphocyte antigen 96 transcript_id : NM_016923.1

name	EG545306 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233619 GeneID:545306 MGI:3644176
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 108 ESTs, 14 Proteins product : predicted gene, EG545306 transcript_id : XM_619609.4

name	EG665407 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94362762 GeneID:665407 MGI:3647110
definition	codon_start : 1 product : hypothetical protein protein_id : XP_981783.1

name	Trpa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244298 GeneID:277328 MGI:3522699
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IDA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0009409 - response to cold [Evidence IDA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0050955 - thermoception [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ANKTM1 product : transient receptor potential cation channel, subfamily A, member 1 protein_id : NP_808449.1

name	EG269105 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82795451 GeneID:269105 MGI:3642999
definition	codon_start : 1 product : hypothetical protein protein_id : XP_891471.1

name	Kcnb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233618 GeneID:98741 MGI:99632
definition	codon_start : 1 product : potassium voltage gated channel, Shab-related subfamily, member 2 protein_id : XP_001473854.1

name	Terf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678287 CCDS:CCDS14827.1 GeneID:21749 MGI:109634
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000781 - chromosome, telomeric region [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007001 - chromosome organization and biogenesis (sensu Eukaryota) [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0000723 - telomere maintenance [Evidence IEA] codon_start : 1 product : telomeric repeat binding factor 1 protein_id : NP_033378.1

name	Gm106 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701802 CCDS:CCDS14828.1 GeneID:226866 MGI:2684952
definition	codon_start : 1 product : hypothetical protein LOC226866 protein_id : NP_001028460.1

name	LOC665434 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233622 GeneID:665434
definition	codon_start : 1 product : similar to Ac2-210 protein_id : XP_001473970.1

name	4930444P10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94362782 GeneID:75799 MGI:1923049
definition	codon_start : 1 product : hypothetical protein LOC75799 protein_id : XP_982048.1

name	Rpl7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981515 CCDS:CCDS14829.1 GeneID:19989 MGI:98073
definition	GO_component : GO:0005830 - cytosolic ribosome (sensu Eukaryota) [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0015934 - large ribosomal subunit [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0007046 - ribosome biogenesis [Evidence IEA] codon_start : 1 product : ribosomal protein L7 protein_id : NP_035421.2

name	Rdh10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:25141231 CCDS:CCDS14830.1 GeneID:98711 MGI:1924238
definition	GO_component : GO:0005792 - microsome [Evidence ISS] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004745 - retinol dehydrogenase activity [Evidence ISS] GO_process : GO:0008152 - metabolism [Evidence IEA]; GO:0007601 - visual perception [Evidence ISS] codon_start : 1 product : retinol dehydrogenase 10 protein_id : NP_598593.1

name	EG665282 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94362733 GeneID:665282 MGI:3649156
definition	codon_start : 1 product : hypothetical protein protein_id : XP_982535.1

name	Stau2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384662 CCDS:CCDS14831.1 GeneID:29819 MGI:1352508
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : staufen (RNA binding protein) homolog 2 protein_id : NP_079579.1

name	Ube2w (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625675 GeneID:66799 MGI:1914049
definition	GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA] codon_start : 1 product : ubiquitin-conjugating enzyme E2W (putative) protein_id : NP_080049.1

name	Tceb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312712 GeneID:67923 MGI:1915173
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : elongin C product : transcription elongation factor B (SIII), polypeptide 1 protein_id : NP_080732.1

name	Tmem70 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117647265 GeneID:70397 MGI:1915068
definition	codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC70397 isoform 2 protein_id : NP_080668.1

name	Tmem70 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117647263 GeneID:70397 MGI:1915068
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC70397 isoform 1 protein_id : NP_081691.2

name	Ly96 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8393737 CCDS:CCDS14832.1 GeneID:17087 MGI:1341909
definition	GO_component : GO:0005886 - plasma membrane [Evidence IEA] GO_process : GO:0006952 - defense response [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA] codon_start : 1 product : lymphocyte antigen 96 protein_id : NP_058619.1

name	EG545306 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233620 GeneID:545306 MGI:3644176
definition	codon_start : 1 product : similar to mKIAA0737 protein protein_id : XP_619609.4

name	LOC100039949 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039949
definition	number : 1 pseudo : _no_value

name	LOC100039949 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039949
definition	number : 2 pseudo : _no_value

name	LOC100039949 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039949
definition	number : 3 pseudo : _no_value

name	LOC665480 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665480
definition	number : 1 pseudo : _no_value

name	LOC100040056 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040056
definition	number : 1 pseudo : _no_value

name	LOC665496 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665496
definition	number : 2 pseudo : _no_value

name	LOC665496 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665496
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128650
definition	standard_name : D1Mit297

name	(CDS detail)
type	STS
link
xref	UniSTS:123298
definition	standard_name : 16.MMHAP23FRF7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:123298
definition	standard_name : 16.MMHAP23FRF7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:129224
definition	standard_name : D2Mit330

name	(CDS detail)
type	STS
link
xref	UniSTS:207128
definition	standard_name : BB431852

name	(CDS detail)
type	STS
link
xref	UniSTS:234073
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:167291
definition	standard_name : D1Ertd705e

name	(CDS detail)
type	STS
link
xref	UniSTS:126223
definition	standard_name : D10Mit44

name	(CDS detail)
type	STS
link
xref	UniSTS:165066
definition	standard_name : AI875664

name	(CDS detail)
type	STS
link
xref	UniSTS:210311
definition	standard_name : RH136320

name	(CDS detail)
type	STS
link
xref	UniSTS:167295
definition	standard_name : D1Ertd762e

name	(CDS detail)
type	STS
link
xref	UniSTS:128452
definition	standard_name : D1Mit119

name	(CDS detail)
type	STS
link
xref	UniSTS:207129
definition	standard_name : BB541252

name	(CDS detail)
type	STS
link
xref	UniSTS:165067
definition	standard_name : AI987979

name	(CDS detail)
type	STS
link
xref	UniSTS:161398
definition	standard_name : RH124576

name	(CDS detail)
type	STS
link
xref	UniSTS:207130
definition	standard_name : RH126878

name	(CDS detail)
type	STS
link
xref	UniSTS:128505
definition	standard_name : D1Mit168

name	LOC100039959 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233615 GeneID:100039959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 87 mRNAs, 1785 ESTs, 24 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_031418.1

clone name	MSMg01-186C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356E22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-271O19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-337E18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-437B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460D12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-361I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313O21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-235E03.b	B6Ng01-235E03.g
ACC	GA046777	GA046778
length	1,189	1,086
definition	B6Ng01-235E03.b	B6Ng01-235E03.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(15,914,854 - 15,916,040)	(15,765,507 - 15,766,600)
sequence	gaattccaatgtatttaaaggtctatagctgcctttcatttgtgaccctg aactgtggcaacaccttacccttaagactagaatgagtgttcccacgagt tcagcaaaggttgccactacaaacagaagagaccagggatgacagagcag agacaaaaagcgtgtgagctgctttcttgttagagcagaggctcctttct tatcaccccccacccccatgaatgacttgtctgaaattgtgtgtatccct cactcaaattttataagttcagataaacaacttaagaattcttgaaaggg cagttaagtgcctagttttggctttgtggtgctggacttggcataaatga ttctacaaagagctcagaaccataccaatgaatagtcacctatagcattt gctaacagggctgaagagatagctcagtcaacaaagcagttactttacaa gcatgatgacctgagctaaatggtccaaaaactacatttcaaaaaccagg tggggtggcgggtgaccacaattccagagctacaaatgtggagacaatca cacccttgatgagtctctgctcagccatgctagcctgtgctatgagttcc aggccagggaagaccctgtcaaaacatcaaaaaattaaaatgctgatggc atgtgatcaattacactggagggcccctctggctttcatacgcatgacat ccttatacacatacatgactgagtatatgctacacacttgaaaacacttg agaagacctatgtatatgcatgcagaatttactaacacacacactcttaa atacacacatacatgtaaccctagccaatacttttcctgtgagtaaggaa gtgatatttctaaatattttttttgcaattgttttttctctttttcaggt atataatgaaggcaccgggcaatgcaagtttacgcacatgtgtgctttaa gtaggtacggatatttttagaaagcagtgtttaaaatccttgaatccatt taaatgtcaatgacatttttcaaacactcagtgagctactaggcataaat gtttccaaaggctggaattccaagggtccagatgacggacttcaaggtgc ctctagggaacttggtgttctggaaatggacagaactaggctgcatgctt agcttatggggccaagcgccttatgtgggactaggccaa	gaattcaccttgcagataggaggaagcgaaaagaagagagagatctttat ccctctgctcattggactagacctcactatctcacagggtgtgataggaa ccactggagcagtcctcattcaaacacaacatctagccagtgacttccaa gacaagtttagccaggtaatggcctctactacagacagccttgaattcct tcaacgccagttaacctctagtagttgttctctgaaaccagagggccctg ggcttactgactgctgaacaggaagggacaaatattcctcaatgtcagca acctgtcattacaggcacagtgcagtagttgcatgacctacccagaagag gcccccaaggaaatggaagacacagttctcttgtcctccaacactctaaa tatctggggtatcaacttacaaagacaaaggctgactttacctcacagtt tgaaaagtcctactagggtttcttggttttgtggcctctaagcaggcagc aaaggaacccattggcagcatgcggcagaacagaaatgcacatcttgtgc ctcaaaagaagaaagggctgggactgaactatgccctataaagcctttcc tcctgaaacctaactctcccactaagtctgctacactggggaccaagcat tgaacacttgggcctttgggaaatacttaacattcagactgtagtactgt aagtgaatctactggtgtgtactgatgtttaacaactcttagcaatcttc aagcacacagttttaaatgttaaggctaattaaccagtaatgtcctcact ttcattttgtgtgctaataggggcacatacaggaactacaagaaatgact ctcattagaagaagaatgaaattagcatttctgagttctaattacgtttt gggatcccagacacaacgtttctttgcttttcactaaaatagtgaacctt tagaggagaaaattttaaaatgcccaaataatataagaaatttgagacag atgacaccattttgttttctgatttatgatctgtcacagctatctgaggt tcatgatcaatagaaacccagattacatcaaggaga
quality values	Open. Hide. 54 31 38 35 62 62 34 16 54 62 49 56 62 47 62 47 62 62 47 62 44 47 62 62 62 62 62 62 62 62 62 50 50 34 34 32 20 27 56 50 62 62 62 62 59 59 62 62 62 59 59 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 59 59 56 59 59 59 54 49 56 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 59 62 62 59 59 54 62 62 62 54 54 62 62 59 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 49 59 59 56 62 54 62 62 62 62 62 62 59 59 62 48 62 62 62 62 62 62 48 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 59 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 56 59 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 54 54 62 62 62 56 62 62 62 56 54 56 56 62 56 62 62 62 62 56 62 62 62 62 62 62 62 62 62 54 52 54 62 62 62 52 62 52 62 62 62 62 62 62 54 62 62 62 52 62 54 62 62 62 62 62 62 53 42 52 62 62 52 58 58 54 54 54 54 58 58 58 58 58 58 58 54 58 58 58 58 54 58 52 48 54 52 54 58 58 52 50 48 52 58 58 58 48 45 26 58 58 58 54 54 54 46 54 58 54 54 52 54 41 21 52 52 52 52 40 37 58 52 58 58 58 52 54 39 58 54 58 34 58 58 48 51 58 58 58 58 51 53 54 53 53 41 58 54 50 50 58 58 49 58 54 40 58 49 40 51 44 45 54 53 41 48 58 46 49 58 58 53 34 53 52 41 28 52 52 53 58 51 48 49 51 49 51 53 39 53 53 46 53 52 51 39 58 50 58 46 58 58 58 46 54 58 54 27 39 53 39 58 51 51 50 53 52 51 37 50 21 43 44 53 49 32 43 44 28 41 33 39 53 58 52 51 32 58 50 38 50 34 52 52 42 35 50 40 39 52 31 52 42 53 31 39 52 35 26 32 54 32 25 54 53 28 37 31 32 33 51 37 49 38 53 40 53 38 46 53 45 31 14 14 54 32 40 30 35 29 53 39 52 30 36 27 46 24 39 46 22 18 54 45 54 45 37 26 35 42 31 13 35 40 32 33 26 52 52 52 32 28 26 32 23 32 36 20 28 12 34 10 37 19 33 30 27 32 34 22 32 31 47 47 32 30 31 52 29 16 25 25 51 51 51 51 51 46 7 21 28 13 31 45 31 41 40 46 46 46 46 15 31 28 30 15 51 51 51 37 31 15 33 42 10 21 26 31 31 35 30 23 31 23 32 25 31 17 22 43 34 14 46 35 16 25 27 16 32 31 20 38 25 34 48 33 13 26 18 43 18 25 16 32 36 33 37 29 35 31 32 48 39 25 30 32 21 24 9 7 16 24 26 17 20 13 9 14 30 48 48 48 26 31 16 36 48 32 27 14 11 14 16 19 13 41 33 25 36 44 25 18 24 25 12 19 37 26 30 21 25 36 21 33 44 23 21 34 29 27 33 21 31 16 21 24 29 32 32 22 37 48 48 36 32 32 21 36 19 17 11 26 15 10 5 10 22 23 21 14 33 21 18 24 20 32 23 21 17 14 8 23 34 27 18 12 6 14 16 3 3 10 30 9 8 9 10 14 15 21 8 11 12 16 10 10 12 16 17 34 15 3 8 20 13 13 28 20 20 30 7 9 9 19 20 13 14 20 12 9 32 27 11 26 19 7 15 6 14 19 18 29 17 13 9 6 19 7 5 5 5 11 9 5 10 4 5 9 6 3 8 13 16 8 3 2 4 5 2 1 3 2 4 8 4 3 2 4 6 5 3 8 13 13 5 25 8 16 18 6 7 6 21 28 28 22 6 5 17 11 7 13 6 5 5 7 4 4 5 6 5 11 6 3 2 2 6 7 7 4 11 3 3 3	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr1_15914854_15916040
seq2: B6Ng01-235E03.b_44_1232 (reverse)

seq1  TTGG-CTAGTCCCACATTA-GCGCTTTGCCCCATAAGCTTAGCACTGCAG  48
      |||| |||||||||||| | |||||| |||||||||||| |||| |||| 
seq2  TTGGCCTAGTCCCACATAAGGCGCTTGGCCCCATAAGCTAAGCA-TGCA-  48

seq1  GCTTAGGCTCCTGTTCCATCT-CAG-ACA-CAAG-TCCCTAGA-GCACC-  92
      || |||  | ||| ||||| | ||| ||| |||| |||||||| ||||| 
seq2  GCCTAG--TTCTG-TCCATTTCCAGAACACCAAGTTCCCTAGAGGCACCT  95

seq1  TGAAGTCGTTCATCTGGACCCTTGGAATTCCAGCCTTTGGAAACATTTTA  142
      |||||||  |||||||||||||||||||||||||||||||||||| ||||
seq2  TGAAGTCCGTCATCTGGACCCTTGGAATTCCAGCCTTTGGAAACA-TTTA  144

seq1  TGCCTAGTAGCTCACTGAGTGTTTGAAAAATGTCATTGACATTTAAATGG  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGTAGCTCACTGAGTGTTTGAAAAATGTCATTGACATTTAAATGG  194

seq1  ATTCAAGGATTTTAAAACAACTGCTTTCTAAAAATATCCGTA-CTACTTA  241
      ||||||||||||||||   ||||||||||||||||||||||| |||||||
seq2  ATTCAAGGATTTTAAA--CACTGCTTTCTAAAAATATCCGTACCTACTTA  242

seq1  AAGCACACATGTGCGTAAACTTGCATTGCCCGGTGCCTTCATTATATACC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACACATGTGCGTAAACTTGCATTGCCCGGTGCCTTCATTATATACC  292

seq1  TGAAAAAGAGAAAAAACAATTGC-AAAAAAATATTTAGAAATATCACTTC  340
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGAAAAAGAGAAAAAACAATTGCAAAAAAAATATTTAGAAATATCACTTC  342

seq1  CTTACTCACAGGAAAAGTATTGGCTAGGGTTACATGTATGTGTGTATTTA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTCACAGGAAAAGTATTGGCTAGGGTTACATGTATGTGTGTATTTA  392

seq1  AGAGTGTGTGTGTTAGTAAATTCTGCATGCATATACATAGGTCTTCTCAA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTGTGTGTTAGTAAATTCTGCATGCATATACATAGGTCTTCTCAA  442

seq1  GTGTTTTCAAGTGTGTAGCATATACTCAGTCATGTATGTGTATAAGGATG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTCAAGTGTGTAGCATATACTCAGTCATGTATGTGTATAAGGATG  492

seq1  TCATGCGTATGAAAGCCAGAGGGGCCCTCCAGTGTAATTGATCACATGCC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCGTATGAAAGCCAGAGGGGCCCTCCAGTGTAATTGATCACATGCC  542

seq1  ATCAGCATTTTAATTTTTTGATGTTTTGACAGGGTCTTCCCTGGCCTGGA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCATTTTAATTTTTTGATGTTTTGACAGGGTCTTCCCTGGCCTGGA  592

seq1  ACTCATAGCACAGGCTAGCATGGCTGAGCAGAGACTCATCAAGGGTGTGA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATAGCACAGGCTAGCATGGCTGAGCAGAGACTCATCAAGGGTGTGA  642

seq1  TTGTCTCCACATTTGTAGCTCTGGAATTGTGGTCACCCGCCACCCCACCT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCCACATTTGTAGCTCTGGAATTGTGGTCACCCGCCACCCCACCT  692

seq1  GGTTTTTGAAATGTAGTTTTTGGACCATTTAGCTCAGGTCATCATGCTTG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTGAAATGTAGTTTTTGGACCATTTAGCTCAGGTCATCATGCTTG  742

seq1  TAAAGTAACTGCTTTGTTGACTGAGCTATCTCTTCAGCCCTGTTAGCAAA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTAACTGCTTTGTTGACTGAGCTATCTCTTCAGCCCTGTTAGCAAA  792

seq1  TGCTATAGGTGACTATTCATTGGTATGGTTCTGAGCTCTTTGTAGAATCA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATAGGTGACTATTCATTGGTATGGTTCTGAGCTCTTTGTAGAATCA  842

seq1  TTTATGCCAAGTCCAGCACCACAAAGCCAAAACTAGGCACTTAACTGCCC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCCAAGTCCAGCACCACAAAGCCAAAACTAGGCACTTAACTGCCC  892

seq1  TTTCAAGAATTCTTAAGTTGTTTATCTGAACTTATAAAATTTGAGTGAGG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGAATTCTTAAGTTGTTTATCTGAACTTATAAAATTTGAGTGAGG  942

seq1  GATACACACAATTTCAGACAAGTCATTCATGGGGGTGGGGGGTGATAAGA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACACACAATTTCAGACAAGTCATTCATGGGGGTGGGGGGTGATAAGA  992

seq1  AAGGAGCCTCTGCTCTAACAAGAAAGCAGCTCACACGCTTTTTGTCTCTG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGCCTCTGCTCTAACAAGAAAGCAGCTCACACGCTTTTTGTCTCTG  1042

seq1  CTCTGTCATCCCTGGTCTCTTCTGTTTGTAGTGGCAACCTTTGCTGAACT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCATCCCTGGTCTCTTCTGTTTGTAGTGGCAACCTTTGCTGAACT  1092

seq1  CGTGGGAACACTCATTCTAGTCTTAAGGGTAAGGTGTTGCCACAGTTCAG  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGGAACACTCATTCTAGTCTTAAGGGTAAGGTGTTGCCACAGTTCAG  1142

seq1  GGTCACAAATGAAAGGCAGCTATAGACCTTTAAATACATTGGAATTC  1187
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACAAATGAAAGGCAGCTATAGACCTTTAAATACATTGGAATTC  1189

seq1: chr1_15765507_15766600
seq2: B6Ng01-235E03.g_69_1154

seq1  GAATTCACCTTGCAGATAGGAGGAAGCGAAAAGAAGAGAGAGATCTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTTGCAGATAGGAGGAAGCGAAAAGAAGAGAGAGATCTTTAT  50

seq1  CCCTCTGCTCATTGGACTAGACCTCACTATCTCACAGGGTGTGATAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGCTCATTGGACTAGACCTCACTATCTCACAGGGTGTGATAGGAA  100

seq1  CCACTGGAGCAGTCCTCATTCAAACACAACATCTAGCCAGTGACTTCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGAGCAGTCCTCATTCAAACACAACATCTAGCCAGTGACTTCCAA  150

seq1  GACAAGTTTAGCCAGGTAATGGCCTCTACTACAGACAGCCTTGAATTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGTTTAGCCAGGTAATGGCCTCTACTACAGACAGCCTTGAATTCCT  200

seq1  TCAACGCCAGTTAACCTCTAGTAGTTGTTCTCTGAAACCAGAGGGCCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACGCCAGTTAACCTCTAGTAGTTGTTCTCTGAAACCAGAGGGCCCTG  250

seq1  GGCTTACTGACTGCTGAACAGGAAGGGACAAATATTCCTCAATGTCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTACTGACTGCTGAACAGGAAGGGACAAATATTCCTCAATGTCAGCA  300

seq1  ACCTGTCATTACAGGCACAGTGCAGTAGTTGCATGACCTACCCAGAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTCATTACAGGCACAGTGCAGTAGTTGCATGACCTACCCAGAAGAG  350

seq1  GCCCCCAAGGAAATGGAAGACACAGTTCTCTTGTCCTCCAACACTCTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCAAGGAAATGGAAGACACAGTTCTCTTGTCCTCCAACACTCTAAA  400

seq1  TATCTGGGGTATCAACTTACAAAGACAAAGGCTGACTTTACCTCACAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGGGTATCAACTTACAAAGACAAAGGCTGACTTTACCTCACAGTT  450

seq1  TGAAAAGTCCTACTAGGGTTTCTTGGTTTTGTGGCCTCTAAGCAGGCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGTCCTACTAGGGTTTCTTGGTTTTGTGGCCTCTAAGCAGGCAGC  500

seq1  AAAGGAACCCATTGGCAGCATGCGGCAGAACAGAAATGCACATCTTGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAACCCATTGGCAGCATGCGGCAGAACAGAAATGCACATCTTGTGC  550

seq1  CTCAAAAGAAGAAAGGGCTGGGACTGAACTATGCCCTATAAAGCCTTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAGAAGAAAGGGCTGGGACTGAACTATGCCCTATAAAGCCTTTCC  600

seq1  TCCTGAAACCTAACTCTCCCACTAAGTCTGCTACACTGGGGACCAAGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAAACCTAACTCTCCCACTAAGTCTGCTACACTGGGGACCAAGCAT  650

seq1  TGAACACTTGGGCCTTTGGGAAATACTTAACATTCAGACTGTAGTACTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACTTGGGCCTTTGGGAAATACTTAACATTCAGACTGTAGTACTGT  700

seq1  AAGTGAATCTACTGGTGTGTACTGATGTTTAACAACTCTTAGCAATCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAATCTACTGGTGTGTACTGATGTTTAACAACTCTTAGCAATCTTC  750

seq1  AAGCACACAGTTTTAAATGTTAAGGCTAATTAACCAGTAATGTCCTCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACACAGTTTTAAATGTTAAGGCTAATTAACCAGTAATGTCCTCACT  800

seq1  TTCATTTTGTGTGCTAATAGGGGCACATACAGGAACTACAAGAAATGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTGTGTGCTAATAGGGGCACATACAGGAACTACAAGAAATGACT  850

seq1  CTCATTAGAAGAAGAAGGAAATTAGCATTTCTGAGTTCTAATTACGTTTT  900
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTCATTAGAAGAAGAATGAAATTAGCATTTCTGAGTTCTAATTACGTTTT  900

seq1  -GGATCCCAGACACAACGTTTCTTTGCTTTTCACTAAAAATAGTGAACCT  949
       |||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGGATCCCAGACACAACGTTTCTTTGCTTTTCACT-AAAATAGTGAACCT  949

seq1  TTAGAGAAGAAAATTTTAAAATGCCCAAATAATTATAAGAAATTTGAGAC  999
      |||||| ||||||||||||||||||||||||| |||||||||||||||||
seq2  TTAGAGGAGAAAATTTTAAAATGCCCAAATAA-TATAAGAAATTTGAGAC  998

seq1  AAGAATGACACCA-TTTGTTTTCTGATTTATGATCTGTCACAGCCTATCC  1048
      |   ||||||||| ||||||||||||||||||||||||||||| |||| |
seq2  A--GATGACACCATTTTGTTTTCTGATTTATGATCTGTCACAG-CTAT-C  1044

seq1  TGAGGTTCATGATCAATAGGAAACCCAGATTTACCATCAAGAGAGA  1094
      |||||||||||||||||| ||||||||||||   ||||||| ||||
seq2  TGAGGTTCATGATCAATA-GAAACCCAGATT--ACATCAAG-GAGA  1086

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information