BAC Information

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BAC

Clone NameB6Ng01-237C21
Chromosome1 (Build37)
Map Location 53,909,044 - 53,909,494
singlet/doubletsinglet
Overlap geneHecw2
Upstream geneHibch, 1700019D03Rik, Gdf8, 1700019A02Rik, Pms1, LOC671024, Ormdl1, Osgepl1, Asnsd1, EG627858, EG627866, LOC100042162, Dnahc7, Stk17b
Downstream gene4930511H11Rik, Gtf3c3, EG627915, D230012E17Rik, Ankrd44
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237C21.bB6Ng01-237C21.g
ACCGA048211GA048212
length1,230445
definitionB6Ng01-237C21.b B6Ng01-237C21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggatttggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagtta
ggtagagtaccttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgattttgttaat
taggattttgtccctgtgccctctagtgagtctagctaagggtttatcta
ttttgttgatttttctcaaagaaccaactcctcgtttggttaattctttg
aatagttcttcttgtttccacttggttgatttcacccctgagtttgatta
tttcctgccgtctactcctcttgggtgaatttgcttcctttttttctaga
gcttttagatgtgttgtcaagctgctagtatgtgctgtctcccgtttctt
cttggaggcactcagagctatgagtttccctcttagaaatgctttcattg
ttgtccaaaggtttgggtacgttgtggcttcatttcatttaactctaaaa
gtcttaatttcctttctttattccttcccttgaccaggtatcatggagaa
gagatgtgttcagtttcacatggactgtaggcttccggtaaatttttgta
ttgagattcaggcttatggcatgggatcgatgaatacatggacaatccaa
tcttgaatctctgtgtgagggcctgctcga
aattactgaatgtctagtgagaaccaggagggtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtcctgcaaagcaaagtgtttacaa
atgtacttaagtttgaaatgaagtgaatcttgaaatttccctaaggggta
gatgaaatgagtggtacatatggcagtctattgtgatgacgtctgctgcc
atcctctacagatatcaatctaacctcatctcaacagtaatgacaaagaa
atgactgggagctggaatttacagaataagatctcagtaattcaagtatg
agaaaaagcccagttcagagagatggaatttgggctgggccgatgtcttt
ggaggtccatgaaattttaattgactttcctgtgcctggggcagtgagcg
caggggctggtcctcccttgagcactcaacctacaaggtgacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_53909044_53909494
seq2: B6Ng01-237C21.g_66_516

seq1  GAATTCAATTACTGAATGTCTAGTGAGAACCAGGAGGGTGTGTGTGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTACTGAATGTCTAGTGAGAACCAGGAGGGTGTGTGTGTGTG  50

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTGCAAAGCAAAGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTGCAAAGCAAAGTGT  100

seq1  TTACAAATGTACTTAAGTTTGAAATGAAGTGAATCTTGAAATTTCCCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAATGTACTTAAGTTTGAAATGAAGTGAATCTTGAAATTTCCCTAA  150

seq1  GGGGTAGATGAAATGAGTGGTACATATGGCAGTCTATTGTGATGACGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTAGATGAAATGAGTGGTACATATGGCAGTCTATTGTGATGACGTCT  200

seq1  GCTGCCATCCTCTACAGATATCAATCTAACCTCATCTCAACAGTAATGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCATCCTCTACAGATATCAATCTAACCTCATCTCAACAGTAATGAC  250

seq1  AAAGAAATGACTGGGAGCTGGAATTTACAGAAGAAGATCTTAGTAATTCA  300
      |||||||||||||||||||||||||||||||| ||||||| |||||||||
seq2  AAAGAAATGACTGGGAGCTGGAATTTACAGAATAAGATCTCAGTAATTCA  300

seq1  AGTATGAGAAAAAGCCCAGTTCAGAGAGATGGAATTTGGGCTGGGCCGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGAGAAAAAGCCCAGTTCAGAGAGATGGAATTTGGGCTGGGCCGAT  350

seq1  GTCTTTGGAGGTCCATGAAAGTTGAATTGACTTTCCTGTGCCTGGGGCAG  400
      |||||||||||||||||||| || ||||||||||||||||||||||||||
seq2  GTCTTTGGAGGTCCATGAAATTTTAATTGACTTTCCTGTGCCTGGGGCAG  400

seq1  TGAGCGCAGGGGCTGGTCCTCCCTTGAGCACTCAACGTACAAGGTGACTT  450
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGAGCGCAGGGGCTGGTCCTCCCTTGAGCACTCAACCTACAAGGTGACTT  450

seq1  T  451
      |
seq2  T  451