MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-239A23
Chromosome	1 (Build37)
Map Location	5,401,918 - 5,403,113
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Sox17, LOC664830, LOC664838, LOC664853, LOC619596, EG619980, LOC100039121, LOC620009, Mrpl15, Lypla1, Tcea1, LOC619829, Rgs20, Atp6v1h, EG636659
Downstream gene	Oprk1, Npbwr1, 4732440D04Rik, Rb1cc1, EG620393, LOC100039302, LOC664946
Link	Open Mouse BAC browser

Click to get alignment info.

name	Sox17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20671 MGI:107543
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC664830 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664830
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins pseudo : _no_value

name	LOC664838 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664838
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC664853 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664853
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC619596 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619596
definition	note : glioma tumor suppressor candidate region gene 2 pseudogene pseudo : _no_value

name	EG619980 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619980 MGI:3644547
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	LOC100039121 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039121
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC620009 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620009
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 379 ESTs, 8 Proteins pseudo : _no_value

name	Mrpl15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27395 MGI:1351639
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lypla1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18777 MGI:1344588
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tcea1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21399 MGI:1196624
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC619829 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619829
definition	note : high mobility group box 3 pseudogene pseudo : _no_value

name	Rgs20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58175 MGI:1929866
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp6v1h (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108664 MGI:1914864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG636659 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:636659 MGI:3644877
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	Oprk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18387 MGI:97439
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Npbwr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226304 MGI:891989
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 32 Proteins

name	4732440D04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:654788 MGI:3604103
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 17 ESTs

name	Rb1cc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12421 MGI:1341850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG620393 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620393 MGI:3645495
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 2 Proteins

name	LOC100039302 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC664946 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664946
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Sox17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802575 GeneID:20671 MGI:107543
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SRY-box containing gene 17 transcript_id : NM_011441.3

name	Mrpl15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328269 GeneID:27395 MGI:1351639
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein L15 transcript_id : NM_025300.2

name	Lypla1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543132 GeneID:18777 MGI:1344588
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lysophospholipase 1 transcript_id : NM_008866.2

name	Tcea1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254396 GeneID:21399 MGI:1196624
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcription elongation factor A (SII) 1 transcript_id : NM_011541.3

name	Rgs20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372967 GeneID:58175 MGI:1929866
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulator of G-protein signaling 20 transcript_id : NM_021374.3

name	Atp6v1h (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369636 GeneID:108664 MGI:1914864
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, H+ transporting, lysosomal V1 subunit H transcript_id : NM_133826.3

name	Oprk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24111247 GeneID:18387 MGI:97439
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : opioid receptor, kappa 1 transcript_id : NM_011011.1

name	Npbwr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94362689 GeneID:226304 MGI:891989
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 32 Proteins product : neuropeptides B/W receptor 1 transcript_id : XM_136404.4

name	Rb1cc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982810 GeneID:12421 MGI:1341850
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RB1-inducible coiled-coil 1 transcript_id : NM_009826.3

name	EG620393 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94362695 GeneID:620393 MGI:3645495
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 2 Proteins product : predicted gene, EG620393 transcript_id : XM_973835.1

name	LOC100039302 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233587 GeneID:100039302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : similar to Motile sperm domain containing 1 transcript_id : XM_001472551.1

name	Sox17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755604 CCDS:CCDS14805.1 GeneID:20671 MGI:107543
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : SRY-box 17 protein_id : NP_035571.1

name	Mrpl15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468983 GeneID:27395 MGI:1351639
definition	GO_component : GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA] [Evidence ISS]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence ISS] [Evidence IEA] GO_process : GO:0000002 - mitochondrial genome maintenance [Evidence TAS]; GO:0006412 - protein biosynthesis [Evidence ISS] codon_start : 1 note : ribosomal protein, mitochondrial, L7 product : mitochondrial ribosomal protein L15 protein_id : NP_079576.1

name	Lypla1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678760 CCDS:CCDS14806.1 GeneID:18777 MGI:1344588
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0006631 - fatty acid metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 note : phospholipase 1a; lysophopholipase 1 product : lysophospholipase 1 protein_id : NP_032892.1

name	Tcea1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755728 GeneID:21399 MGI:1196624
definition	GO_component : GO:0005654 - nucleoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0003746 - translation elongation factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006952 - defense response [Evidence IEA]; GO:0030218 - erythrocyte differentiation [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006354 - RNA elongation [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : transcription elongation factor A (SII) 1 protein_id : NP_035671.1

name	Rgs20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625669 CCDS:CCDS14807.1 GeneID:58175 MGI:1929866
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence TAS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0009968 - negative regulation of signal transduction [Evidence IEA] codon_start : 1 note : regulator of G-protein signaling Z1 product : regulator of G-protein signaling 20 protein_id : NP_067349.2

name	Atp6v1h (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981588 CCDS:CCDS14808.1 GeneID:108664 MGI:1914864
definition	GO_component : GO:0000221 - hydrogen-transporting ATPase V1 domain [Evidence IEA]; GO:0000300 - peripheral to membrane of membrane fraction [Evidence IEA] GO_function : GO:0001671 - ATPase stimulator activity [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0015078 - hydrogen ion transporter activity [Evidence IEA]; GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006754 - ATP biosynthesis [Evidence IEA]; GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : vacuolar ATP synthase subunit H; vacuolar proton pump H subunit; V-ATPase H subunit; vacuolar ATPase subunit H; ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H product : ATPase, H+ transporting, lysosomal, V1 subunit H protein_id : NP_598587.2

name	Oprk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24111248 CCDS:CCDS14809.1 GeneID:18387 MGI:97439
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004987 - kappa-opioid receptor activity [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : opioid receptor, kappa 2 product : opioid receptor, kappa 1 protein_id : NP_035141.1

name	Npbwr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20819685 GeneID:226304 MGI:891989
definition	codon_start : 1 product : G protein-coupled receptor 7 protein_id : XP_136404.1

name	Rb1cc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14994303 GeneID:12421 MGI:1341850
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : 200 kDa FAK family kinase-interacting protein; coiled coil forming protein 1 product : RB1-inducible coiled-coil 1 protein_id : NP_033956.1

name	EG620393 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94362696 GeneID:620393 MGI:3645495
definition	codon_start : 1 product : similar to RPLK9433 protein_id : XP_978929.1

name	LOC100039302 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233588 GeneID:100039302
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472601.1

name	LOC664838 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664838
definition	number : 2 pseudo : _no_value

name	LOC664838 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664838
definition	number : 1 pseudo : _no_value

name	LOC664853 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664853
definition	number : 1 pseudo : _no_value

name	LOC664853 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664853
definition	number : 2 pseudo : _no_value

name	LOC100039121 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039121
definition	number : 4 pseudo : _no_value

name	LOC100039121 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039121
definition	number : 3 pseudo : _no_value

name	LOC100039121 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039121
definition	number : 2 pseudo : _no_value

name	LOC100039121 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039121
definition	number : 1 pseudo : _no_value

name	EG636659 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:636659
definition	number : 2 pseudo : _no_value

name	EG636659 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:636659
definition	number : 1 pseudo : _no_value

name	LOC664946 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664946
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:471102
definition	standard_name : Sox17

name	(CDS detail)
type	STS
link
xref	UniSTS:162931
definition	standard_name : RH126223

name	(CDS detail)
type	STS
link
xref	UniSTS:128794
definition	standard_name : D1Mit427

name	(CDS detail)
type	STS
link
xref	UniSTS:209785
definition	standard_name : RH127073

name	(CDS detail)
type	STS
link
xref	UniSTS:234064
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:207125
definition	standard_name : RH127028

name	(CDS detail)
type	STS
link
xref	UniSTS:207124
definition	standard_name : BB280152

name	(CDS detail)
type	STS
link
xref	UniSTS:163048
definition	standard_name : RH126340

name	(CDS detail)
type	STS
link
xref	UniSTS:178356
definition	standard_name : Tcea1

name	(CDS detail)
type	STS
link
xref	UniSTS:207123
definition	standard_name : AU022349

name	(CDS detail)
type	STS
link
xref	UniSTS:128839
definition	standard_name : D1Mit474

name	(CDS detail)
type	STS
link
xref	UniSTS:144086
definition	standard_name : Oprk1

name	(CDS detail)
type	STS
link
xref	UniSTS:234063
definition

name	LOC664830 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233584 GeneID:664830
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : hypothetical LOC664830 pseudo : _no_value transcript_id : XR_030593.1

name	EG619980 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149233585 GeneID:619980 MGI:3644547
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : predicted gene, EG619980 pseudo : _no_value transcript_id : XR_030641.1

name	LOC620009 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233586 GeneID:620009
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 379 ESTs, 8 Proteins product : similar to pyruvate dehydrogenase (lipoamide) beta pseudo : _no_value transcript_id : XR_030608.1

name	4732440D04Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94362692 GeneID:654788 MGI:3604103
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 17 ESTs product : RIKEN cDNA 4732440D04 gene transcript_id : XR_001537.1

clone name	MSMg01-280A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488G14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-128C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275K08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-410J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125D20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-129E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340J17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-046K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334I15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-457K16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-216K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023M18
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-239A23.b	B6Ng01-239A23.g
ACC	GA049588	GA049589
length	1,178	1,171
definition	B6Ng01-239A23.b	B6Ng01-239A23.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcctccatagttgtgccaacacctcagtgtcctcggcacatactaa cttgttgcttgccacaatctcatcttagcctgtgagacaggcaagctttc atcagtggaatcaagtgtggacagaggttaagtattgggcccaattcttc aggtctggggcctgatggtctgaaacccccatttccctcacatgcctccc tgccaagtatgcagatgttctaacactttcttctgttgtcagcaaagact ttataaaaaccaggtatgcaattccactttggtttttaaaaagttgccta agcaaggggtcaccttttcaaacattatagtaatcaaatagcatatgtcc cactccctcttccccatactgttacccagatgaatccatctgtgttgaga cagagaagagcctttgtgaattcattgccaagacagctgcctgcctgcac agctttctcaatgccctcagggccaacggccaacttcctcagtctaccaa gaagtggactttacaggcgttacagatgctatttacattgtgggttctgg gctattctccctcagcataatttccaattactatctgggaaaaaaactct acagtgaaatgaagcaaattctttgaggtaatttttcacgatgggatgtt ccaggtttcattgtcatagaagtgccagtgacaattactgccccccaaca cacacacacacacacttatactactagaaaatgaaacaccattccctttt acatgtgtccagtatgactaatgaaaatccaaagcctcaattttctttct caggaaatatcctgaatcataaaagtaagttataagtcttaattggcttc acaacttaatcatttcaacacttcatggcatgatttttttttttcttatt ttcttcttaatagaacaatttccctccctgggcctttagatttttttttt tttttgattcccactcaaaatgtcagtgaaattcatctctacatgccatt tactactgtcgagtagttattaaaaagaacattttaaactcgaattcttc tacattaccatgtttatgtagccaaccaatttgggagtttgtttggagag tgacccaattttttaatggatccgatagccaatgtcatcagcgtctcagt acttggaaattccgcgttcacataagat	gaattctttgattagcactgtaccccatttttaaaaagggttatgtgatt ctctgaaatctaacttcttgagttctttgttgagtttaattaaaaattat ccctctatcagatgtaggattggcaaagatctttttccagtctgttggtt gctgttttttcctattgacgatgttctttgtcttacagaaactttgtaat ttttatgaggtcccatttatgtactgttgatcttagagcataagctactg gtgctctgtttaggaaatttgcccctgtgcccatgtattcaaggttcttc cccagtttctcttctactagtttcagggtttctggttttatgtggaggtc tttgatcatttgaacttgagctttgtacaaggtggtaagaatgagtcaat ttgcagtcctcgatatgttgactaccagttcaaccagtatcatttgttga aaatgctgtcttcttcccattggatggttttagctcctctgtcaaagatc aagtgaccataggtatgtgggtccatttctgggtcttcaattctattcca ttgatctacctgcctgtttctgtatggataccatacagtttttatcacta ttgctctgtaatacagcttgaggttaggaatggtgattcccccagaagtt cttttattgttgaaagtagtttttgctatcctgggttttttgttattcta aatgaacctgagaattgctttttctaattctagaaagaattgatttggaa ttttgatggggcctgttttgtgacaatggtcaattttatggtcaattttg gagaaagtaacatgaggtgccgagaaggtatattcttttgtattagggtg aagtgttctatagatatctgttaaatccatttggcttatagcttctgtta ctttcactgtgtttctgtttattttctgtttccatgatctgagcattgat gagagtggggtattgaagtctccactattattatgtgaggtgcatatgta cctcgagcttagtaaagttcttttttatgatgtggtactggtgcattgga gccatagatgtcaatgagagtccatttgggaagattttcattgatgagat acaatggaccttcgtatcttttggaaggttgtagaaattcaatctcattc gaattatgaactgggctatac
quality values	Open. Hide. 58 33 21 26 58 58 58 52 58 38 23 62 62 62 62 62 54 49 49 62 41 25 62 54 51 62 62 62 47 47 62 56 62 56 56 56 59 59 44 44 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 54 59 62 54 62 62 62 62 62 62 62 62 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 49 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 45 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 54 58 58 58 58 58 58 58 58 58 58 58 58 58 52 54 58 54 58 58 58 58 58 58 58 49 58 54 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 54 58 45 58 58 54 58 58 49 58 58 54 54 58 58 52 54 58 58 58 58 58 47 49 58 58 54 54 58 58 58 58 58 58 58 58 38 58 58 58 58 58 58 58 51 58 54 58 51 54 58 51 51 58 58 58 41 42 58 58 58 46 51 58 58 54 54 58 54 49 58 48 58 53 33 58 46 54 51 39 58 58 58 58 53 52 58 58 58 50 58 49 58 36 46 58 51 49 50 58 50 51 58 52 58 51 50 50 47 44 58 50 51 37 53 53 41 58 58 35 50 49 37 46 34 50 53 58 39 37 40 42 54 51 43 51 52 58 50 58 43 58 58 46 31 49 53 42 53 52 50 49 53 50 51 53 54 51 54 53 54 49 54 54 49 49 50 41 49 41 45 51 37 49 45 54 54 54 42 35 53 33 49 51 52 49 32 46 39 54 51 37 26 18 35 49 49 35 31 41 29 42 54 52 54 45 40 44 30 47 40 53 34 53 51 31 33 24 51 32 51 54 54 54 37 32 32 27 27 52 53 40 38 28 38 31 32 34 33 52 51 32 35 28 49 33 40 39 33 32 16 42 40 53 34 32 31 40 33 43 30 41 46 33 31 39 31 30 29 46 51 51 35 43 45 45 35 38 42 33 29 42 33 31 30 31 31 31 30 30 28 31 46 43 34 43 43 42 30 32 31 33 34 34 42 28 31 31 31 31 42 47 22 31 30 30 38 32 32 31 30 31 24 25 31 29 13 27 31 35 42 30 46 46 46 46 48 48 46 46 46 27 37 22 19 39 31 46 46 33 43 21 22 31 15 24 24 26 42 38 29 24 7 13 17 15 31 44 33 19 48 33 31 27 48 32 24 29 44 26 19 19 33 47 30 38 27 33 29 47 47 47 47 48 48 48 48 47 47 48 48 48 26 29 32 17 24 21 48 20 13 11 28 30 21 48 48 37 25 33 25 32 32 31 32 32 29 43 25 7 16 21 27 32 19 8 4 5 4 10 17 27 20 9 21 14 8 47 22 11 13 14 14 20 20 23 20 27 16 27 13 16 28 9 21 10 17 6 27 9 34 34 40 24 6 13 20 17 9 18 34 31 18 11 33 15 7 14 19 6 19 7 3 4 12 11 5 6 16 12 9 8 15 8 12 11 8 14 13 23 9 30 16 20 16 19 10 17 10 11 6 14 5 7 7 7 16 11 24 11 8 16 4 11 5 20 22 6 8 6 28 24 4 4 17 3 13 9 5 6 7 4 22 13 8 5 11 14 28 17 28 22 21 22 5 7 3 1 3 3 3 1 3 2 2 3 3 3 3 4 5 10 13 13 8 3 6 10 4 4 2 1 2 1 6 6 5 7 13 15 8 6 8 6 6 23 18 12 14 8 7 5 5 3 2 3 7 9 17 5 4 8 14 8 13 8	Open. Hide. 62 47 31 32 62 62 62 62 62 62 44 44 44 24 21 28 32 29 59 62 44 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 59 62 54 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 54 42 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 49 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 58 54 58 58 54 58 58 58 58 58 58 58 58 58 54 58 58 58 54 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 54 58 58 58 54 58 58 58 58 54 54 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 54 52 58 58 49 44 41 49 47 49 50 58 58 54 58 58 58 58 58 58 51 51 58 51 50 54 54 53 54 54 58 58 58 54 53 58 51 54 58 51 53 53 45 52 58 58 58 58 39 41 58 51 50 52 49 58 58 46 37 58 51 40 58 40 39 44 42 58 58 58 54 51 39 58 48 31 58 46 46 58 58 58 48 52 41 58 54 37 58 50 58 58 49 49 52 54 50 54 58 58 58 58 51 49 41 49 52 53 58 51 51 58 58 50 58 58 58 58 58 58 50 49 40 37 49 49 42 51 54 49 39 52 54 53 53 47 47 50 54 16 54 33 36 54 50 49 51 54 54 54 53 53 35 32 53 47 54 41 39 39 37 53 54 47 37 51 37 37 41 41 40 28 54 54 47 32 46 35 29 54 54 51 27 45 37 47 54 54 44 40 40 32 53 32 53 52 42 52 32 52 33 31 31 41 43 53 46 31 31 33 32 30 53 52 40 33 32 53 51 31 39 32 31 21 51 51 37 36 45 51 35 51 51 42 31 37 31 31 43 36 42 43 31 16 45 27 45 23 33 24 51 22 33 42 26 33 21 31 31 33 32 36 38 23 46 46 43 38 36 31 25 29 25 28 46 28 20 30 42 38 31 42 42 31 29 32 29 31 31 31 26 36 31 26 30 31 31 46 41 27 32 47 31 31 24 33 26 31 47 39 31 37 32 36 33 31 32 32 24 37 30 25 35 16 25 13 22 19 29 35 48 37 29 25 33 31 25 10 33 33 47 24 37 21 29 25 48 21 31 29 48 48 28 38 22 31 18 44 23 24 19 32 32 30 32 24 30 19 30 34 23 32 34 21 17 22 30 31 23 32 19 33 18 22 29 43 48 33 27 32 10 17 25 15 26 16 31 31 31 20 15 6 10 16 19 18 21 25 27 7 15 16 17 19 21 18 13 8 11 20 11 17 3 9 13 17 18 8 9 5 25 3 4 9 16 17 27 8 9 11 22 25 33 19 11 21 11 19 15 40 34 19 14 12 6 12 16 21 3 14 7 13 14 6 15 18 6 12 8 12 21 21 15 22 10 10 11 7 6 7 7 13 16 16 5 19 4 4 5 3 14 10 2 5 11 5 12 4 14 4 8 6 12 19 22 6 16 6 5 2 1 18 19 28 28 17 3 1 3 11 11 21 5 8 8 3 3 5 4 11 20 6 7 10 9 4 17 12 4 4 3 2 3 2 1 1 4 28 30 18 4 4 16 22 6 7 22 5 3 2 2 5 9 18 12 2 1 5 3 2 3 2 2 4 11 3 1 3 4 5 9 7 4 6 4 4 6 3 1 1 2 27 4 9 12 4 4 4 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_5401918_5403113
seq2: B6Ng01-239A23.b_46_1223 (reverse)

seq1  ATCTTATTCCAGACTACTAGTGAACGCGGAATATCCAAGTACTGAGGACA  50
      |||||||            ||||||||||||| |||||||||||||   |
seq2  ATCTTAT------------GTGAACGCGGAATTTCCAAGTACTGAG---A  35

seq1  GGCTGATGACATTTGGGCTAATTTGGGAACCATTTAAAAAATGGTTCACT  100
       ||||||||||||  |||||   | ||| ||||| ||||| ||| |||||
seq2  CGCTGATGACATT--GGCTA---TCGGATCCATTAAAAAATTGGGTCACT  80

seq1  CTTCAAACAAACT-CCAAATTGTTTGCTTACATAAACATGGTAATGTAGA  149
      || |||||||||| |||||||| |||  ||||||||||||||||||||||
seq2  CTCCAAACAAACTCCCAAATTGGTTGGCTACATAAACATGGTAATGTAGA  130

seq1  GAATTTCGAGTTTAAAATG-TCTTTTTAATAACTACTCGACAGTAGTAAA  198
        | ||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGAATTCGAGTTTAAAATGTTCTTTTTAATAACTACTCGACAGTAGTAAA  180

seq1  TGGCATGTAAGAGATGAATTTCACTGACATTTTGAGTGGGAATC-AAAAA  247
      |||||||| ||||||||||||||||||||||||||||||||||| |||||
seq2  TGGCATGT-AGAGATGAATTTCACTGACATTTTGAGTGGGAATCAAAAAA  229

seq1  AAAAAAAAATCTAAAGGCCCAGGGAGGGAAATTGTTTCTATTAAGAAGAA  297
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAAAAAAAATCTAAAGGCCCAGGGAGGGAAATTG-TTCTATTAAGAAGAA  278

seq1  AATAAG-AAAAAAAAAATCATGCCATGAAGTGTTGAAATGATTAAGTTGT  346
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAAAAAAAAAAATCATGCCATGAAGTGTTGAAATGATTAAGTTGT  328

seq1  GAAGCCAATTAAGACTTATAACTTACTTTTATGATTCAGGATATTTCCTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCAATTAAGACTTATAACTTACTTTTATGATTCAGGATATTTCCTG  378

seq1  AGAAAGAAAATTGAGGCTTTGGATTTTCATTAGTCATACTGGACACATGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAATTGAGGCTTTGGATTTTCATTAGTCATACTGGACACATGT  428

seq1  AAAAGGGAATGGTGTTTCATTTTCTAGTAGTATAAGTGTGTGTGTGTGTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGAATGGTGTTTCATTTTCTAGTAGTATAAGTGTGTGTGTGTGTG  478

seq1  TGTTGGGGGGCAGTAATTGTCACTGGCACTTCTATGACAATGAAACCTGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGGGGCAGTAATTGTCACTGGCACTTCTATGACAATGAAACCTGG  528

seq1  AACATCCCATCGTGAAAAATTACCTCAAAGAATTTGCTTCATTTCACTGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCCATCGTGAAAAATTACCTCAAAGAATTTGCTTCATTTCACTGT  578

seq1  AGAGTTTTTTTCCCAGATAGTAATTGGAAATTATGCTGAGGGAGAATAGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTTTTTCCCAGATAGTAATTGGAAATTATGCTGAGGGAGAATAGC  628

seq1  CCAGAACCCACAATGTAAATAGCATCTGTAACGCCTGTAAAGTCCACTTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACCCACAATGTAAATAGCATCTGTAACGCCTGTAAAGTCCACTTC  678

seq1  TTGGTAGACTGAGGAAGTTGGCCGTTGGCCCTGAGGGCATTGAGAAAGCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGACTGAGGAAGTTGGCCGTTGGCCCTGAGGGCATTGAGAAAGCT  728

seq1  GTGCAGGCAGGCAGCTGTCTTGGCAATGAATTCACAAAGGCTCTTCTCTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGGCAGGCAGCTGTCTTGGCAATGAATTCACAAAGGCTCTTCTCTG  778

seq1  TCTCAACACAGATGGATTCATCTGGGTAACAGTATGGGGAAGAGGGAGTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACACAGATGGATTCATCTGGGTAACAGTATGGGGAAGAGGGAGTG  828

seq1  GGACATATGCTATTTGATTACTATAATGTTTGAAAAGGTGACCCCTTGCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATATGCTATTTGATTACTATAATGTTTGAAAAGGTGACCCCTTGCT  878

seq1  TAGGCAACTTTTTAAAAACCAAAGTGGAATTGCATACCTGGTTTTTATAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAACTTTTTAAAAACCAAAGTGGAATTGCATACCTGGTTTTTATAA  928

seq1  AGTCTTTGCTGACAACAGAAGAAAGTGTTAGAACATCTGCATACTTGGCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTGCTGACAACAGAAGAAAGTGTTAGAACATCTGCATACTTGGCA  978

seq1  GGGAGGCATGTGAGGGAAATGGGGGTTTCAGACCATCAGGCCCCAGACCT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCATGTGAGGGAAATGGGGGTTTCAGACCATCAGGCCCCAGACCT  1028

seq1  GAAGAATTGGGCCCAATACTTAACCTCTGTCCACACTTGATTCCACTGAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATTGGGCCCAATACTTAACCTCTGTCCACACTTGATTCCACTGAT  1078

seq1  GAAAGCTTGCCTGTCTCACAGGCTAAGATGAGATTGTGGCAAGCAACAAG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTTGCCTGTCTCACAGGCTAAGATGAGATTGTGGCAAGCAACAAG  1128

seq1  TTAGTATGTGCCGAGGACACTGAGGTGTTGGCACAACTATGGAGGAATTC  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTATGTGCCGAGGACACTGAGGTGTTGGCACAACTATGGAGGAATTC  1178

BAC Information

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BAC

BAC End Information

Alignment Information