BAC Information

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BAC

Clone NameB6Ng01-239N12
Chromosome1 (Build37)
Map Location 14,806,712 - 14,807,210
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039859, LOC100039869, Eya1, LOC665391, Msc
Downstream geneSmt3h2-ps4, EG665407, Trpa1, EG269105, LOC100039949, LOC100039959, Kcnb2, Ppia-ps1_109.1, Terf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-239N12.bB6Ng01-239N12.g
ACCGA050163GA050164
length493750
definitionB6Ng01-239N12.b B6Ng01-239N12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
cttggtcctgacaaggcagaaaactatttcttcacgagcagacaacagaa
ggtattaagctagatgtagggttctcattcttgtagcttagaagtcttag
ctccatactctaagactccactgccttaggcagtcccagcaccgtgcttt
gctgtgctcatttagaaacaaggagaatatttaatttgctaaaacacatt
ttatgagagaaattacctaaaatgaggccatatgttctttggctctgaag
acagaaacagagatagattttgtggggcaaaaactgaagtgcataaaacc
atggaaaaattagagagacaattttttttcatgagagctctgaatttacc
accaccattcactgtctcttaatatacatgtgtctgtttgtccacaatag
tggaagcactcatgtgcaaaaacatgaacaattacaataaagggactgcc
aaacatttgagagagtgaggaggtggtatatggaggatgaagg

gaattctttccttctcttctgtggtgaaaataacctgcaaaagctgtagg
caatcatcccaagtgggctgatgagagaacattaatgattctaccaggca
ggttagtccagctggattttctgaaaaagtaggatggttagatttccagt
tatagagatcagctgatgagaatggccagtactgaaaagtctggagagag
tgagggtcctaaggtggccccactgtgcacaaaggaaaggcagacatggt
gttgggaaccttatctgtgaagggaccctgtacacacaggcttcaggtcc
cagctgcctgtccttccactgtgccaccaccgactccaggggcagcctct
agatgtcatggacgcacaggaaccagagggggcatcgggatagatcttgg
ggggagctgaggaccaaggtgaaggctccattttgggaggaacctttggt
ttcacttttggttcatggagagccagggcttgggagcctggcttctgctg
tgggatccacggtttgacccatgggggtggattctggacgaggtcttgcc
acacagttatagagggctgctggtccaggtgggacccaggttagtcctga
aagacaacagctttaacttcaaaaattacagtcaagtaaaaaattgtcca
tcactgggaagagaggccccttggtattgcaaactttatatgccccagta
caggggaatgccagggcccaagaagtgggagtgggtgagtagggggagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_14806712_14807210
seq2: B6Ng01-239N12.b_46_544

seq1  GAATTCCTTGGTCCTGACAAGGCAGAAAACTATTTCTTCACGAGCAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGGTCCTGACAAGGCAGAAAACTATTTCTTCACGAGCAGACA  50

seq1  ACAGAAGGTATTAAGCTAGATGTAGGGTTCTCATTCTTGTAGCTTAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGGTATTAAGCTAGATGTAGGGTTCTCATTCTTGTAGCTTAGAAG  100

seq1  TCTTAGCTCCATACTCTAAGACTCCACTGCCTTAGGCAGTCCCAGCACCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGCTCCATACTCTAAGACTCCACTGCCTTAGGCAGTCCCAGCACCG  150

seq1  TGCTTTGCTGTGCTCATTTAGAAACAAGGAGAATATTTAATTTGCTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGCTGTGCTCATTTAGAAACAAGGAGAATATTTAATTTGCTAAAA  200

seq1  CACATTTTATGAGAGAAATTACCTAAAATGAGGCCATATGTTCTTTGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTTATGAGAGAAATTACCTAAAATGAGGCCATATGTTCTTTGGCT  250

seq1  CTGAAGACAGAAACAGAGATAGATTTTGTGGGGCAAAAACTGAAGTGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGACAGAAACAGAGATAGATTTTGTGGGGCAAAAACTGAAGTGCAT  300

seq1  AAAACCATGGAAAAATTAGAGAGACAATTTTTTTTCATGAGAGCTCTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCATGGAAAAATTAGAGAGACAATTTTTTTTCATGAGAGCTCTGAA  350

seq1  TTTACCACCACCATTCACTGTCTCTTAATATACATGTGTCTGTTTGTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCACCACCATTCACTGTCTCTTAATATACATGTGTCTGTTTGTCCA  400

seq1  CAATAGTGGAAGCACTCATGTGCAAAAACATGAACAATTACAATAAAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGTGGAAGCACTCATGTGCAAAAACATGAACAATTACAATAAAGGG  450

seq1  ACTGCCAAACATTTGAGAGAGTGAGGAGGTGGTATATGGAGGATGAAGG  499
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCAAACATTTGAGAGAGTGAGGAGGTGGTATATGGAGGATGAAGG  499


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