BAC Information

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BAC

Clone NameB6Ng01-239O13
Chromosome1 (Build37)
Map Location 187,637,316 - 187,638,246
singlet/doubletsinglet
Overlap genenone
Upstream geneMosc2, LOC100039079, C130074G19Rik, Mark1, Iars2, Bpnt1, Eprs, 9630028B13Rik, LOC100039138, Slc30a10, 5033404E19Rik
Downstream geneLOC677785, Lyplal1, Tgfb2, Rrp15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-239O13.bB6Ng01-239O13.g
ACCGA050211GA050212
length9311,214
definitionB6Ng01-239O13.b B6Ng01-239O13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacaaagcggtctaaatctttctctggtcctttgttttcccttg
gttttgagggagggtctcccatggcccaggctgtgtagctccgtagctca
agctgagtttgaacttgtcctcctcttgtcctgagattgtacattaccca
gcatgcccagccgctttgaacctagagttatcacttcagcagcagtcaca
gagtcctcaataggaatagattccacctcagggacaaactgccatagctt
acctaagcagttcagcccctgagttccatcctgagacactgccaccccat
cctctcattctgagacactgccaccccatcctttcatcctgagacgctgc
cacctcatcccctcatcctgagattctgccaccccatcctctcatcctga
gatgctgccatcccatcttccgaggttgctctgtttctcaccctgtctct
gccacaccgtctatgagagtgagactcctccatgtcttctaaacctccgt
tggcctccgatgacttatttatttcgaattaaaaaaaaaaatacatggct
tgagagtttcaaacatgtctatgctttgatcgttttaaatccctgctacc
tgcagttctccagggtcttctccatgtctccttccctaccgcatactctt
ttagtctttttcttctatatctataatctgctaaatctgaaattagtgct
acccaactgtgcatggatgtgaagccatctactggagcatggccaaccct
tcaggggccacactcttgaaggaaactgacttgtcacttcctcagaagct
gtcaactataatagttccttgtttacgggtagggcctattgagccccttc
ccactaaatcagagacttttaaagagattttaaaattattatttttttgt
gcatgtatgtacgtgtgtggggtgtgtgtgt
gaattcagtgagaaggttacccattcagtaacattcaaatttacttctag
tagagttggtgaaactaattaggcattacaaagaacgtagctagaatacc
tcaggcctagtctgcagagtgattacttaggacagtagccagtctcactc
aaaacaagggaatacacaatggcctagtgaataggtagatttaccatgaa
agagttagggaatccccctgagacaggttttttcactagacccaaagaaa
cagcataaatcaggcatttactaagaacccctggtggtgggcttaacaat
agactatcattacacctggctcccttcttagtggtaagccttcttagggt
atggtccccaccatcttttgatgtatacattccttttgtattgtgtcact
ataactcggtggatgtatctcgcctggtttcttgttattcttctgtataa
aaagtttgatgctcgacttgaaaaattacactcagattctacacactctc
tccactctctcttgtcacttttgtcattcgccaactcctttgcccacctg
caaggagacccattccacgcagataggagacccaagaaaggggttagtct
gcagcaagctcccattttttaattgggctatttggtttgttggtgtctaa
tttcttgagttctttgtaaattttggatatgaaccctctaccagatgtag
gattggtgaagattctttcccaatctgtaggctattttgtcctattgaca
gtgtcctttgccttacagaagctttacagtttcatgagatcccatttatc
cattgtcgatattagtgtctgagccactggtagtctgttcaaggagttgt
ctcctgtaacaatgcattaaagggtattttccacttttttcttctgtaat
atttagtctatctgcttttatgttgaagtccttgattcactttggacatg
agttctgtaccagggagattagtatggattctattttcaattctttctac
atgtagaacattccaggttagaccaagcatcattttgtcaaagatgctgt
cttcttatgaatggttttggcttctttataaaaaaaatgtctcttgtagg
ttgttttttattttccaggtctcaattagttccaattggaatcacatggc
tggatctgttacaattactggcacagatttttaatatcactatatgtgtg
tctccgtggtgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_187637316_187638246
seq2: B6Ng01-239O13.b_46_976

seq1  GAATTCTACAAAGCGGTCTAAATCTTTCTCTGGTCCTTTGTTTTCCCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAAAGCGGTCTAAATCTTTCTCTGGTCCTTTGTTTTCCCTTG  50

seq1  GTTTTGAGGGAGGGTCTCCCATGGCCCAGGCTGTGTAGCTCCGTAGCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAGGGAGGGTCTCCCATGGCCCAGGCTGTGTAGCTCCGTAGCTCA  100

seq1  AGCTGAGTTTGAACTTGTCCTCCTCTTGTCCTGAGATTGTACATTACCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGTTTGAACTTGTCCTCCTCTTGTCCTGAGATTGTACATTACCCA  150

seq1  GCATGCCCAGCCGCTTTGAACCTAGAGTTATCACTTCAGCAGCAGTCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCCCAGCCGCTTTGAACCTAGAGTTATCACTTCAGCAGCAGTCACA  200

seq1  GAGTCCTCAATAGGAATAGATTCCACCTCAGGGACAAACTGCCATAGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCTCAATAGGAATAGATTCCACCTCAGGGACAAACTGCCATAGCTT  250

seq1  ACCTAAGCAGTTCAGCCCCTGAGTTCCATCCTGAGACACTGCCACCCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAGCAGTTCAGCCCCTGAGTTCCATCCTGAGACACTGCCACCCCAT  300

seq1  CCTCTCATTCTGAGACACTGCCACCCCATCCTTTCATCCTGAGACGCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCATTCTGAGACACTGCCACCCCATCCTTTCATCCTGAGACGCTGC  350

seq1  CACCTCATCCCCTCATCCTGAGATTCTGCCACCCCATCCTCTCATCCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCATCCCCTCATCCTGAGATTCTGCCACCCCATCCTCTCATCCTGA  400

seq1  GATGCTGCCATCCCATCTTCCGAGGTTGCTCTGTTTCTCACCCTGTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGCCATCCCATCTTCCGAGGTTGCTCTGTTTCTCACCCTGTCTCT  450

seq1  GCCACACCGTCTATGAGAGTGAGACTCCTCCATGTCTTCTAAACCTCCGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACCGTCTATGAGAGTGAGACTCCTCCATGTCTTCTAAACCTCCGT  500

seq1  TGGCCTCCGATGACTTATTTATTTCGAATTAAAAAAAAAAATACATGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCCGATGACTTATTTATTTCGAATTAAAAAAAAAAATACATGGCT  550

seq1  TGAGAGTTTCAAACATGTCTATGCTTTGATCGTTTTAAATCCCTGCTACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTTTCAAACATGTCTATGCTTTGATCGTTTTAAATCCCTGCTACC  600

seq1  TGCAGTTCTCCAGGGTCTTCTCCATGTCTCCTTCCCTACCGCATACTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTCTCCAGGGTCTTCTCCATGTCTCCTTCCCTACCGCATACTCTT  650

seq1  TTAGTCTTTTTCTTCTATATCTATAATCTGCTAAATCTGAAATTAGTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTTTTTCTTCTATATCTATAATCTGCTAAATCTGAAATTAGTGCT  700

seq1  ACCCAACTGTGCATGGATGTGAAGCCATCTACTGGAGCATGGCCAACCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACTGTGCATGGATGTGAAGCCATCTACTGGAGCATGGCCAACCCT  750

seq1  TCAGGGGCCACACTCTTGAAGGAAACTGACTTGTCACTTCCTCAGAAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGCCACACTCTTGAAGGAAACTGACTTGTCACTTCCTCAGAAGCT  800

seq1  GTCAACTATAATAGTTCCTTGTTTACGGGTAGGGCCTATTGAGCCCCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACTATAATAGTTCCTTGTTTACGGGTAGGGCCTATTGAGCCCCTTC  850

seq1  CCACTAAATCAGAGACTTTTAAAGAGATTTTAAAAATTATTA-TTTTTTG  899
      ||||||||||||||||||||||||||||||| |||||||||| |||||||
seq2  CCACTAAATCAGAGACTTTTAAAGAGATTTT-AAAATTATTATTTTTTTG  899

seq1  TGCATGTATGTACGTGTGTGGGGTGTGTGTGT  931
      ||||||||||||||||||||||||||||||||
seq2  TGCATGTATGTACGTGTGTGGGGTGTGTGTGT  931