BAC Information

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BAC

Clone NameB6Ng01-240G08
Chromosome1 (Build37)
Map Location 95,867,058 - 95,868,121
singlet/doubletsinglet
Overlap geneEG666009
Upstream geneGpr35, Aqp12, Kif1a, Agxt, 2310007B03Rik, E030010N08Rik, Sned1, Mterfd2, LOC665966, Pask, Ppp1r7, Tmem16g, Hdlbp, Sept2, Farp2, Stk25, Bok, Thap4, Atg4b, Dtymk, Ing5, D2hgdh, Gal3st2, LOC100041596
Downstream geneEG619597, Neu4, Pdcd1, LOC666012, LOC666025, LOC100040685
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240G08.bB6Ng01-240G08.g
ACCGA050578GA050579
length1,0251,060
definitionB6Ng01-240G08.b B6Ng01-240G08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgttcatgtggctatattcttttaggtttgttaaaagattgctt
tcttgttttttctagagcttaggttcttttcttgtgttggcattttccct
ttattatcctttgaagggctggatttgtgtatagatattttgtgaatttg
gttttgtcatggaataccttggtttctccctctatggtaattcagagttt
tactgggcatagtagcttgggctggcatttgtgttcttatagggtctgta
tgacatcttcccatgatcttctggctttcatacactctgggaagaagtca
ggtgtaattctgataggtctgcctttatatgtcacttaacctttttcccg
tactgcttttagtattctatatttatttagtgcatttggtgttttgatta
ttatgtgatgggaggaacttcttttctgatccacactatttggagttctg
taggcttcttgtatgttcatgagcatctctttctttaggttggggaagtt
ttttctataatttttgaagatatttactggccctttaagttggaaatctc
ccttctcatctatacctattatccttacgtttggtcttctcattgtgtcc
tggatttcctggatgttttgggttaggatccttttgcatttttcatttcc
tttgattgttgtgtcagtgttttctatggtatcttctgcatctgagattc
tctcttctatctcttgttatctattggtgatacttgcatctatggctcct
gacttctttcctaggttttctatctccagagttgtctcccttttttgatt
tttttattgtttctatttccattttttagatcctgggatggttttgttca
attctttcacctgtttggatctgtttccctgtaatttttaaagggatttt
tgtgttttcctctttaaggacttctacctgttttacctgtttttgtctta
tattttttttaaagggaagttatttatgtccttcttatacttctccatca
tcattatgagaaggtgactttggga
gaattcagactgaggcggggtagggaagtttattcgaggactgttatttc
tggcagctgtggtctttatgaccactactctgttcctacagatagggaaa
gggccaggtggtcttgaatttgttttcacgggcagggaaaaggaaaattc
ttgaagcagcaggagacagtaggagatagaagctgctgtatacagcttgc
agcaggaaacaaggggaagcaagctttgcaaatagctttaatgtatgtac
atcaggcaagctaaaaattataattctttatttgtattcgcgggcattaa
tctttaaggcacagtgtccaccttctgcaggaatgggcctttcatctcag
acctctttctgatctcctttatctctatttttatttttcactattaatct
ctttacttgtcactgtcatctatctctcttgagtctgctgaagctttgct
ctggttttaccttttgttttaacctgttaccttggtcagataaggcatgg
ctgggccttgtggccttttgtggaactccctcactctaggtctgtgggcg
gggccgatggtccactgaaagaaaatgagattttgtatcttgtgattcat
gtaaaagagttgtctatgagcccgaggcctggggccaagaacaaagcaga
acagacagggctgttgttaagacattcctaagaacagcttgattgtacaa
gcagggctatctcgtctgggtcaacaccacctggctggaacctcccctct
gtctactgccccttgatgccgggtaaaggcatacttcaactggttgctat
gtgagcaagataagccccccagccaacaggaacaaagtcctgatgccctt
ttgctaacatgtaatctttctgttaatgtttaaataagccaatagtgtgt
cactatgctgaatttccacacccctaagtcccttaccccataaaacccct
agctttcgagcctcgtggccgacatccattatctcctggtgtgggatgca
tgttggtccgagctccgtcataaatgtctcatgtaattacatcagatacg
ttctttgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_95867058_95868121
seq2: B6Ng01-240G08.g_62_1121

seq1  GAATTCAGACTGAGGCGGGGTAGGGAAGTTTATTCGAGGACTGTTATTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACTGAGGCGGGGTAGGGAAGTTTATTCGAGGACTGTTATTTC  50

seq1  TGGCAGCTGTGGTCTTTATGACCACTACTCTGTTCCTACAGATAGGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCTGTGGTCTTTATGACCACTACTCTGTTCCTACAGATAGGGAAA  100

seq1  GGGCCAGGTGGTCTTGAATTTGTTTTCACGGGCAGGGAAAAGGAAAATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGGTGGTCTTGAATTTGTTTTCACGGGCAGGGAAAAGGAAAATTC  150

seq1  TTGAAGCAGCAGGAGACAGTAGGAGATAGAAGCTGCTGTATACAGCTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGCAGCAGGAGACAGTAGGAGATAGAAGCTGCTGTATACAGCTTGC  200

seq1  AGCAGGAAACAAGGGGAAGCAAGCTTTGCAAATAGCTTTAATGTATGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAAACAAGGGGAAGCAAGCTTTGCAAATAGCTTTAATGTATGTAC  250

seq1  ATCAGGCAAGCTAAAAATTATAATTCTTTATTTGTATTCGCGGGCATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGCAAGCTAAAAATTATAATTCTTTATTTGTATTCGCGGGCATTAA  300

seq1  TCTTTAAGGCACAGTGTCCACCTTCTGCAGGAATGGGCCTTTCATCTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAGGCACAGTGTCCACCTTCTGCAGGAATGGGCCTTTCATCTCAG  350

seq1  ACCTCTTTCTGATCTCCTTTATCTCTATTTTTATTTTTCACTATTAATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTTCTGATCTCCTTTATCTCTATTTTTATTTTTCACTATTAATCT  400

seq1  CTTTACTTGTCACTGTCATCTATCTCTCTTGAGTCTGCTGAAGCTTTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTTGTCACTGTCATCTATCTCTCTTGAGTCTGCTGAAGCTTTGCT  450

seq1  CTGGTTTTACCTTTTGTTTTAACCTGTTACCTTGGTCAGATAAGGCATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTTACCTTTTGTTTTAACCTGTTACCTTGGTCAGATAAGGCATGG  500

seq1  CTGGGCCTTGTGGCCTTTTGTGGAACTCCCTCACTCTAGGTCTGTGGGCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCTTGTGGCCTTTTGTGGAACTCCCTCACTCTAGGTCTGTGGGCG  550

seq1  GGGCCGATGGTCCACTGAAAGAAAATGAGATTTTGTATCTTGTGATTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCGATGGTCCACTGAAAGAAAATGAGATTTTGTATCTTGTGATTCAT  600

seq1  GTAAAAGAGTTGTCTATGAGCCCGAGGCCTGGGGCCAAGAACAAAGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGAGTTGTCTATGAGCCCGAGGCCTGGGGCCAAGAACAAAGCAGA  650

seq1  ACAGACAGGGCTGTTGTTAAGACATTCCTAAGAACAGCTTGATTGTACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAGGGCTGTTGTTAAGACATTCCTAAGAACAGCTTGATTGTACAA  700

seq1  GCAGGGCTATCTCGTCTGGGTCAACACCACCTGGCTGGAACCTCCCCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGCTATCTCGTCTGGGTCAACACCACCTGGCTGGAACCTCCCCTCT  750

seq1  GTCTACTGCCCCTTGATGCCGGGTAAAGGCATACTTCAACTGGTTGCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACTGCCCCTTGATGCCGGGTAAAGGCATACTTCAACTGGTTGCTAT  800

seq1  GTGAGCAAGATAAGCCCCCCAGCCAACAGGAACAAAGTCCTGATGCCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCAAGATAAGCCCCCCAGCCAACAGGAACAAAGTCCTGATGCCCTT  850

seq1  TTGCTAACATGTAATCTTTCTGTTAATGTTTAAATAAGCCAATAGTGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAACATGTAATCTTTCTGTTAATGTTTAAATAAGCCAATAGTGTGT  900

seq1  CACTATGCTGAA-TTCCACACCCCTAAGTCCCTTACCCCATAAAAACCCC  949
      |||||||||||| |||||||||||||||||||||||||||| ||||||||
seq2  CACTATGCTGAATTTCCACACCCCTAAGTCCCTTACCCCAT-AAAACCCC  949

seq1  TAGCTTTCGAGCCTCGTGGCCGACATCCATTATCTCCT-GTGTGGGATGC  998
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAGCTTTCGAGCCTCGTGGCCGACATCCATTATCTCCTGGTGTGGGATGC  999

seq1  ATGTTGGTCCGGAGCTCCGTCATTAAATGTCCTCATGTAATTACATCAGG  1048
      |||||||||| ||||||||||| ||||||| ||||||||||||||||| |
seq2  ATGTTGGTCC-GAGCTCCGTCA-TAAATGT-CTCATGTAATTACATCA-G  1045

seq1  ATACGGTCCTTTGTGA  1064
      |||| || ||||||||
seq2  ATAC-GTTCTTTGTGA  1060