BAC Information

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BAC

Clone NameB6Ng01-240J13
Chromosome1 (Build37)
Map Location 126,928,257 - 126,929,433
singlet/doubletsinglet
Overlap genenone
Upstream geneDpp10, LOC666998
Downstream geneActr3, Slc35f5, Lypd1, E030049G20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240J13.bB6Ng01-240J13.g
ACCGA050726GA050727
length2011,158
definitionB6Ng01-240J13.b B6Ng01-240J13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aggaaccacacaaacagctgcatgtgtaaccctagcattgtggaggagag
cagggacagggggatcagtgggtcttactgactgcagcctagctcaaaga
taaataatagacctatacgaagggaataaaatgaggagtcataaaacagg
acatttgacaacctcctagatcatagaggtagagagggagagaaagagag
a
gaattcaactggggataagtagatgatgttataaacagagggagtttact
aagcaagaaagatacttctgagactggccaggtgatatgcatttgctcat
ggccaatgtccatgatgcccccccctctatatatatggtctcaccttagt
cagaaaagaaataaaaaaaaaaaaccaaatctctagaggcccaagggaac
agagctgcaagacttggccacaggggaagcagtcctagaactgatagagc
atctccagatcttggttaccctgcctaaacctcaattactctagcaccca
acctatgcacaggaagaaaccaaatggaccaaggggaagaggcaaactgg
aagcaagtggctgcttattcttcctggccagcagacccctgctgttatca
gaagagaaatggtcaccaaactctctcaggcgacccatctgggagtgact
aactgctgagttaataagacccaaatattccagacaaaaaattccctaga
tttggattacctctctttcaaaatggtatagtcttcatagccaaagtttt
cctaaatttggaaaaggtcctaaatgttaattaaaaacaccattgtgccc
agaggctccaaagctcagggcaggtaacaaggataaatagaaagaaaaag
ttaagttaatatgtccttgagactggtgaaaattaggccaactgcctacc
tgttgctctcatgaaggccagatataccccatattaagacatttatatgg
caaaaattacttttcccttctcaaattcttgcagatcctgcaacagaccc
agagtactaatcatcaaatggtttgagaggcgcacccttgcctttgtctg
agcctacctactagttccagcctggcagtcttacatggttagagagggtc
ctcacttagagcccacagccagtgtgaaaagggcccatagcctataattc
tcacccctactgaagtgaaggtcaccagtgtccccatgggcctaccacct
cagctaaaggagattacatcagatgacaatgggtgtcacagagctcaacc
ctaagataagagtgattacctatgctgtcatgttgtctgtttgtctccat
ggaaaagcccatctcatagcagctttgagatccagatccactggagaccc
aacccacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_126928257_126929433
seq2: B6Ng01-240J13.g_64_1221 (reverse)

seq1  GGTGGGTTGGGTCT-CAGTGGATCTGTA-CTCAAAGCCTGGCTTATGAGA  48
      |||||||||||||| ||||||||||| | ||||||| |||   |||||||
seq2  GGTGGGTTGGGTCTCCAGTGGATCTGGATCTCAAAG-CTG--CTATGAGA  47

seq1  ATTTGGGGCCTTCTCCATGGGGAGACAAAACAGGACAACCATGACAACCA  98
         ||||  ||| |||||  |||||| ||||| ||||| |||||| | ||
seq2  ---TGGG--CTTTTCCAT--GGAGAC-AAACA-GACAA-CATGAC-AGCA  86

seq1  TAGGGTTATCACTCTTATCCTTAGGGGTTGGAGGCTCTGGTGACCACCCA  148
      || ||| ||||||||||| |||| ||||||   ||||| |||| ||||||
seq2  TA-GGTAATCACTCTTAT-CTTA-GGGTTG--AGCTCT-GTGA-CACCCA  129

seq1  TTGTCATCTGATGTAATCTCCTTTAGCTGGAGGTGGTAGGCCCATGGGGA  198
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTGTCATCTGATGTAATCTCCTTTAGCT-GAGGTGGTAGGCCCATGGGGA  178

seq1  CACTGGTGACCTTCACTTCAGTAGGGGTGAGAATTATAGGCTATGGG-CC  247
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CACTGGTGACCTTCACTTCAGTAGGGGTGAGAATTATAGGCTATGGGCCC  228

seq1  TTTTCACACTGGCTGTGGGCTCTAAGTGAGGACCCTCTCTAACCATGTAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACACTGGCTGTGGGCTCTAAGTGAGGACCCTCTCTAACCATGTAA  278

seq1  GACTGCCAGGCTGGAACTAGTAGGTAGGCTCAGACAAAGGCAAGGGTGCG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCCAGGCTGGAACTAGTAGGTAGGCTCAGACAAAGGCAAGGGTGCG  328

seq1  CCTCTCAAACCATTTGATGATTAGTACTCTGGGTCTGTTGCAGGATCTGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAAACCATTTGATGATTAGTACTCTGGGTCTGTTGCAGGATCTGC  378

seq1  AAGAATTTGAGAAGGGAAAAGTAATTTTTGCCATATAAATGTCTTAATAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTGAGAAGGGAAAAGTAATTTTTGCCATATAAATGTCTTAATAT  428

seq1  GGGGTATATCTGGCCTTCATGAGAGCAACAGGTAGGCAGTTGGCCTAATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTATATCTGGCCTTCATGAGAGCAACAGGTAGGCAGTTGGCCTAATT  478

seq1  TTCACCAGTCTCAAGGACATATTAACTTAACTTTTTCTTTCTATTTATCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCAGTCTCAAGGACATATTAACTTAACTTTTTCTTTCTATTTATCC  528

seq1  TTGTTACCTGCCCTGAGCTTTGGAGCCTCTGGGCACAATGGTGTTTTTAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTACCTGCCCTGAGCTTTGGAGCCTCTGGGCACAATGGTGTTTTTAA  578

seq1  TTAACATTTAGGACCTTTTCCAAATTTAGGAAAACTTTGGCTATGAAGAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATTTAGGACCTTTTCCAAATTTAGGAAAACTTTGGCTATGAAGAC  628

seq1  TATACCATTTTGAAAGAGAGGTAATCCAAATCTAGGGAATTTTTTGTCTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCATTTTGAAAGAGAGGTAATCCAAATCTAGGGAATTTTTTGTCTG  678

seq1  GAATATTTGGGTCTTATTAACTCAGCAGTTAGTCACTCCCAGATGGGTCG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTGGGTCTTATTAACTCAGCAGTTAGTCACTCCCAGATGGGTCG  728

seq1  CCTGAGAGAGTTTGGTGACCATTTCTCTTCTGATAACAGCAGGGGTCTGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGAGAGTTTGGTGACCATTTCTCTTCTGATAACAGCAGGGGTCTGC  778

seq1  TGGCCAGGAAGAATAAGCAGCCACTTGCTTCCAGTTTGCCTCTTCCCCTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGGAAGAATAAGCAGCCACTTGCTTCCAGTTTGCCTCTTCCCCTT  828

seq1  GGTCCATTTGGTTTCTTCCTGTGCATAGGTTGGGTGCTAGAGTAATTGAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCATTTGGTTTCTTCCTGTGCATAGGTTGGGTGCTAGAGTAATTGAG  878

seq1  GTTTAGGCAGGGTAACCAAGATCTGGAGATGCTCTATCAGTTCTAGGACT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGGCAGGGTAACCAAGATCTGGAGATGCTCTATCAGTTCTAGGACT  928

seq1  GCTTCCCCTGTGGCCAAGTCTTGCAGCTCTGTTCCCTTGGGCCTCTAGAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCCTGTGGCCAAGTCTTGCAGCTCTGTTCCCTTGGGCCTCTAGAG  978

seq1  ATTTGGTTTTTTTTTTTTATTTCTTTTCTGACTAAGGTGAGACCATATAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTTTTTTTTTTTTATTTCTTTTCTGACTAAGGTGAGACCATATAT  1028

seq1  ATAGAGGGGGGGGCATCATGGACATTGGCCATGAGCAAATGCATATCACC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGGGGGGGGCATCATGGACATTGGCCATGAGCAAATGCATATCACC  1078

seq1  TGGCCAGTCTCAGAAGTATCTTTCTTGCTTAGTAAACTCCCTCTGTTTAT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGTCTCAGAAGTATCTTTCTTGCTTAGTAAACTCCCTCTGTTTAT  1128

seq1  AACATCATCTACTTATCCCCAGTTGAATTC  1177
      ||||||||||||||||||||||||||||||
seq2  AACATCATCTACTTATCCCCAGTTGAATTC  1158