MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-240L06
Chromosome	1 (Build37)
Map Location	129,824,769 - 129,946,808
singlet/doublet	doublet
Overlap gene	Rab3gap1, Zranb3, LOC666778, LOC100042670
Upstream gene	LOC383559, Mgat5, LOC667090, Tmem163, Acmsd, Ccnt2, Ysk4
Downstream gene	EG666784, R3hdm1, LOC667109, LOC100042111, Ubxd2, Lct, Mcm6, Dars, LOC620659, Cxcr4
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC383559 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383559
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Mgat5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107895 MGI:894701
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667090 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667090
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 55 ESTs, 7 Proteins pseudo : _no_value

name	Tmem163 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72160 MGI:1919410
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acmsd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:266645 MGI:2386323
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccnt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72949 MGI:1920199
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ysk4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22625 MGI:1203481
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins

name	Rab3gap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226407 MGI:2445001
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zranb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226409 MGI:1918362
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC666778 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666778
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 82 ESTs, 2 Proteins pseudo : _no_value

name	LOC100042670 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042670
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 1440 ESTs, 5 Proteins

name	EG666784 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666784 MGI:3645458
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein

name	R3hdm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226412 MGI:2448514
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667109 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs

name	LOC100042111 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042111
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Ubxd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67812 MGI:1915062
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lct (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226413 MGI:104576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mcm6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17219 MGI:1298227
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dars (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226414 MGI:2442544
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC620659 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620659
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 6663 ESTs, 15 Proteins pseudo : _no_value

name	Cxcr4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12767 MGI:109563
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mgat5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126215533 GeneID:107895 MGI:894701
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mannoside acetylglucosaminyltransferase 5 transcript_id : NM_145128.3

name	Tmem163 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037290 GeneID:72160 MGI:1919410
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 163 transcript_id : NM_028135.1

name	Acmsd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354147 GeneID:266645 MGI:2386323
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : amino carboxymuconate semialdehyde decarboxylase transcript_id : NM_001033041.2

name	Ccnt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56550068 GeneID:72949 MGI:1920199
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin T2 transcript_id : NM_028399.1

name	Ysk4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149234252 GeneID:22625 MGI:1203481
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins product : Yeast Sps1/Ste20-related kinase 4 (S. cerevisiae) transcript_id : XM_001477564.1

name	Rab3gap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378206 GeneID:226407 MGI:2445001
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB3 GTPase activating protein subunit 1 transcript_id : NM_178690.3

name	Zranb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801832 GeneID:226409 MGI:1918362
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs product : zinc finger, RAN-binding domain containing 3 transcript_id : NM_027678.2

name	LOC100042670 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234288 GeneID:100042670
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 1440 ESTs, 5 Proteins product : similar to ribosomal protein L28 transcript_id : XM_001479050.1

name	EG666784 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363902 GeneID:666784 MGI:3645458
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein product : predicted gene, EG666784 transcript_id : XM_994881.1

name	R3hdm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50845429 GeneID:226412 MGI:2448514
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : R3H domain 1 (binds single-stranded nucleic acids) transcript_id : NM_181750.2

name	LOC667109 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234291 GeneID:667109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs product : hypothetical LOC667109 transcript_id : XM_001479097.1

name	Ubxd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85861251 GeneID:67812 MGI:1915062
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UBX domain containing 2 transcript_id : NM_026390.2

name	Lct (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487296 GeneID:226413 MGI:104576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lactase transcript_id : NM_001081078.1

name	Mcm6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678831 GeneID:17219 MGI:1298227
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) transcript_id : NM_008567.1

name	Dars (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21703997 GeneID:226414 MGI:2442544
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aspartyl-tRNA synthetase transcript_id : NM_145507.1

name	Dars (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363909 GeneID:226414 MGI:2442544
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aspartyl-tRNA synthetase transcript_id : NM_177445.3

name	Cxcr4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116268122 GeneID:12767 MGI:109563
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-X-C motif) receptor 4 transcript_id : NM_009911.3

name	Mgat5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46047861 CCDS:CCDS15245.1 GeneID:107895 MGI:894701
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008375 - acetylglucosaminyltransferase activity [Evidence IMP]; GO:0030144 - alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0006487 - protein amino acid N-linked glycosylation [Evidence IDA] codon_start : 1 note : mannoside acetyl glucosaminyltransferase 5; beta1,6N-acetylglucosaminyltransferase V product : mannoside acetylglucosaminyltransferase 5 protein_id : NP_660110.2

name	Tmem163 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037291 GeneID:72160 MGI:1919410
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC72160 protein_id : NP_082411.1

name	Acmsd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74315894 CCDS:CCDS15247.1 GeneID:266645 MGI:2386323
definition	GO_component : GO:0005625 - soluble fraction [Evidence ISS] GO_function : GO:0001760 - aminocarboxymuconate-semialdehyde decarboxylase activity [Evidence ISS] [Evidence IEA]; GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA]; GO:0046874 - quinolinate metabolism [Evidence ISS] codon_start : 1 product : amino carboxymuconate semialdehyde decarboxylase protein_id : NP_001028213.1

name	Ccnt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56550069 CCDS:CCDS15248.1 GeneID:72949 MGI:1920199
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0019901 - protein kinase binding [Evidence IEA] codon_start : 1 product : cyclin T2 protein_id : NP_082675.1

name	Ysk4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149234253 GeneID:22625 MGI:1203481
definition	codon_start : 1 product : Yeast Sps1/Ste20-related kinase 4 protein_id : XP_001477614.1

name	Rab3gap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520087 CCDS:CCDS15249.1 GeneID:226407 MGI:2445001
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : RAB3 GTPase-activating protein product : RAB3 GTPase activating protein subunit 1 protein_id : NP_848805.1

name	Zranb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124430705 GeneID:226409 MGI:1918362
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger, RAN-binding domain containing 3 protein_id : NP_081954.1

name	LOC100042670 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234289 GeneID:100042670
definition	codon_start : 1 product : similar to ribosomal protein L28 protein_id : XP_001479100.1

name	EG666784 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363903 GeneID:666784 MGI:3645458
definition	codon_start : 1 product : similar to LOC635138 protein protein_id : XP_999975.1

name	LOC667109 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234292 GeneID:667109
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479147.1

name	R3hdm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50845430 CCDS:CCDS15250.1 GeneID:226412 MGI:2448514
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA] codon_start : 1 product : R3H domain (binds single-stranded nucleic acids) protein_id : NP_861415.2

name	Ubxd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85861252 CCDS:CCDS15251.1 GeneID:67812 MGI:1915062
definition	codon_start : 1 product : UBX domain containing 2 protein_id : NP_080666.2

name	Lct (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487297 GeneID:226413 MGI:104576
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0015926 - glucosidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 product : lactase-phlorizin hydrolase protein_id : NP_001074547.1

name	Mcm6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678832 CCDS:CCDS15252.1 GeneID:17219 MGI:1298227
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IPI]; GO:0008094 - DNA-dependent ATPase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003697 - single-stranded DNA binding [Evidence IPI] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006268 - DNA unwinding during replication [Evidence IPI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : mini chromosome maintenance deficient 6 product : minichromosome maintenance complex component 6 protein_id : NP_032593.1

name	Dars (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703998 CCDS:CCDS15253.1 GeneID:226414 MGI:2442544
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : aspartyl-tRNA synthetase protein_id : NP_663482.1

name	Dars (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28974984 CCDS:CCDS15253.1 GeneID:226414 MGI:2442544
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : aspartyl-tRNA synthetase protein_id : NP_803228.1

name	Cxcr4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116268123 CCDS:CCDS15254.1 GeneID:12767 MGI:109563
definition	GO_component : GO:0030426 - growth cone [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016493 - C-C chemokine receptor activity [Evidence IEA]; GO:0004950 - chemokine receptor activity [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0001667 - ameboidal cell migration [Evidence IMP]; GO:0007420 - brain development [Evidence IMP]; GO:0006935 - chemotaxis [Evidence IEA]; GO:0006952 - defense response [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007281 - germ cell development [Evidence IMP]; GO:0008354 - germ cell migration [Evidence IMP]; GO:0008045 - motor axon guidance [Evidence IMP]; GO:0001764 - neuron migration [Evidence IDA]; GO:0001569 - patterning of blood vessels [Evidence IMP]; GO:0030334 - regulation of cell migration [Evidence IMP] [Evidence IGI]; GO:0007165 - signal transduction [Evidence IEA]; GO:0042098 - T cell proliferation [Evidence IMP] codon_start : 1 note : fusin; chemokine (C-X-C) receptor 4; leukocyte-expressed seven-transmembrane-domain; chemokine receptor 4 product : chemokine (C-X-C motif) receptor 4 protein_id : NP_034041.2

name	LOC383559 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383559
definition	number : 1 pseudo : _no_value

name	LOC100042111 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042111
definition	number : 3 pseudo : _no_value

name	LOC100042111 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042111
definition	number : 2 pseudo : _no_value

name	LOC100042111 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042111
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:142232
definition	standard_name : D1Jcs10

name	(CDS detail)
type	STS
link
xref	UniSTS:145902
definition	standard_name : AU049455

name	(CDS detail)
type	STS
link
xref	UniSTS:162916
definition	standard_name : RH126208

name	(CDS detail)
type	STS
link
xref	UniSTS:128560
definition	standard_name : D1Mit218.2

name	(CDS detail)
type	STS
link
xref	UniSTS:128559
definition	standard_name : ND

name	(CDS detail)
type	STS
link
xref	UniSTS:164126
definition	standard_name : AI480971

name	(CDS detail)
type	STS
link
xref	UniSTS:234202
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:123813
definition	standard_name : 28.MHAa65T_M13Rev.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128863
definition	standard_name : D1Mit495

name	(CDS detail)
type	STS
link
xref	UniSTS:234208
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:498738
definition	standard_name : Ccnt2

name	(CDS detail)
type	STS
link
xref	UniSTS:209782
definition	standard_name : RH127051

name	(CDS detail)
type	STS
link
xref	UniSTS:260980
definition	standard_name : BQ198886

name	(CDS detail)
type	STS
link
xref	UniSTS:167282
definition	standard_name : RH126586

name	(CDS detail)
type	STS
link
xref	UniSTS:234205
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:210124
definition	standard_name : RH136129

name	(CDS detail)
type	STS
link
xref	UniSTS:124465
definition	standard_name : 42.MMHAP54FLF6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128754
definition	standard_name : D1Mit393

name	(CDS detail)
type	STS
link
xref	UniSTS:123058
definition	standard_name : 10.MMHAP95FRD7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:123522
definition	standard_name : 21.MMHAP45FRG9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:167268
definition	standard_name : RH127016

name	(CDS detail)
type	STS
link
xref	UniSTS:234206
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:211093
definition	standard_name : RH127783

name	(CDS detail)
type	STS
link
xref	UniSTS:161102
definition	standard_name : RH124280

name	(CDS detail)
type	STS
link
xref	UniSTS:163104
definition	standard_name : RH126396

name	(CDS detail)
type	STS
link
xref	UniSTS:234204
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:142283
definition	standard_name : D1Wsu22e

name	(CDS detail)
type	STS
link
xref	UniSTS:235906
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234207
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128956
definition	standard_name : D1Mit99

name	(CDS detail)
type	STS
link
xref	UniSTS:116258
definition	standard_name : D1Mit286

name	(CDS detail)
type	STS
link
xref	UniSTS:271182
definition	standard_name : PMC151816P1

name	(CDS detail)
type	STS
link
xref	UniSTS:141356
definition	standard_name : Cmkar4

name	(CDS detail)
type	STS
link
xref	UniSTS:463203
definition	standard_name : Cxcr4

name	(CDS detail)
type	STS
link
xref	UniSTS:464706
definition	standard_name : Cxcr4

name	(CDS detail)
type	STS
link
xref	UniSTS:272668
definition	standard_name : PMC310750P1

name	(CDS detail)
type	STS
link
xref	UniSTS:270473
definition	standard_name : PMC124533P1

name	(CDS detail)
type	STS
link
xref	UniSTS:271307
definition	standard_name : PMC154343P1

name	(CDS detail)
type	STS
link
xref	UniSTS:128702
definition	standard_name : D1Mit344

name	(CDS detail)
type	STS
link
xref	UniSTS:128703
definition	standard_name : D1Mit344.1

name	(CDS detail)
type	STS
link
xref	UniSTS:123671
definition	standard_name : 25.MHAa92c1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128611
definition	standard_name : D1Mit263

name	(CDS detail)
type	STS
link
xref	UniSTS:128412
definition	standard_name : D19Mit72

name	LOC667090 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234285 GeneID:667090
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 55 ESTs, 7 Proteins product : similar to ribosomal protein L27a pseudo : _no_value transcript_id : XR_034018.1

name	LOC666778 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234290 GeneID:666778
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 82 ESTs, 2 Proteins product : similar to BCL2/adenovirus E1B 19kDa-interacting protein 3-like pseudo : _no_value transcript_id : XR_034049.1

name	LOC620659 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234293 GeneID:620659
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 6663 ESTs, 15 Proteins product : similar to eukaryotic translation elongation factor 1 alpha 1 pseudo : _no_value transcript_id : XR_034075.1

clone name	MSMg01-136N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500N20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-528D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386G01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-263H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429J09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-168C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341P03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-138P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105D11
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-240L06.b	B6Ng01-240L06.g
ACC	GA050802	GA050803
length	1,064	1,107
definition	B6Ng01-240L06.b	B6Ng01-240L06.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(129,945,745 - 129,946,808)	(129,824,769 - 129,825,878)
sequence	gaattccatacaggtatatacaacatattcagatcacacccacctactgc atgcttctgccaacctcccagataacccactggacatgttccctttgaaa tagcgtctcttgtgtagctcagtctggcctccagttggctatgtagacag agatgagccttctgagtgctggatgaccagtatgcaccaccttacccagt ttatacagtgctggggatggaacccagggcctcttgcatgctagacaaac attctgtcaactgagttacatccctagttttctttcccatgtaaccattt gagcaaatcaatttttactgcttttgattttttgttttgggagacaggat ctcactgtttataataggttggcttcaaatgtacagaggtctgtctgcat ctgccttacaagtgctgagattaaagttgtgtggcactacaccctgctaa ttcttacttttcttccatcctttttctgtaattaaaaaaagagttttact tacgtatttgtatgtgcatttgtgtgcaaatctccatggaggccagaaga tatcagatgacccactcagctatctctccagcccatcaacactttttctt taaccaaggcctcctttttcactttgatggtagtggtgctggtgatgctg gtgatgctggtggtgatagtgatgtgtgtcttattttttaaaaggtctag gttctgaatatgcatagtaaatcttttgacagttcttagtcaaaaacttt caaaatgttaccaactgagatttccagttcattttgggttctaaactgat cgctatgtattagcacattaatttacagagtccaagtacttgttcaacca gagacatgctaacagccttgaaaacattttgactctctaaatgtttggat taaccttgcctttggttaatttgtatttgatttcctgtttggaaatcaaa aataactgtcaattttattttcttatcccaccatgtcttagagtttccat tgctgtgaagatagataacaatgaccaaagcactctttttttgttttgtt tggttttggggtct	gaattctttgtaagaaatatgtatccatctttactcaggtgttcagtgca gtacatttctaatggaagaaaaggccagacaacctaaatgtcaacattgt gctgcatgactgtaaagctttcttctagagtcgcttattgctttgtttga ggtggggtattgagacatgaacccagggcctcatgtattccaggcaagtg ctctgccactgagctacaggtgcatacctcaagaaccttaatgtagaaac tgtgcgtgttgggcatggtggcagatgtttttattcccatcactcaggag tcaagaggcagaggcagaggcacagagaggcgcagagaggcagaggcgca gagaggcagagagagagagaggcagagagagagagagagaggcagaggca gaggcacagagaggcagagagagagaggcagagagagagaggcagagaga gagaggcagaggcagaggcgcagagaggcagagagagaggcagagaggca gagagagagaggcagagagagaggcagagagagagaggcagaggcacaga gaggcagaggcagaggcaagaggcagaggcagaggcaagaggcagaggca agagtcagaggcagaggcagaggcaagaggcagaggcaagaggcagaggc aagaggcagaggcagaggcagagacaagaggcagaggcaagaggcagagg cagaggctcagagaggcagaggcgcagagaggcagaggcggacgcagaga ggcagaggcagaggcagaggcaggcagatctcttgtgcattgagctctgc ataggaagctccaggccagccagaactacatagttaaaccctgtctcagc aaacaaacaagattaagtcatagaaactgtattagtaactaggtgttgta atacagcacagaatgctttcaattatgctgatatgtaggtatagaaaaaa gattggagagaaatacagtcaagtggtaatagttttcccaggtatgaaag tacatttttgtttgtttaatttgtttcatcttgtattctaatatctatgg catatacttctattggaagaaaaatacgttgaaagtaactctataattca ggcatta
quality values	Open. 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Hide. 62 49 44 59 62 62 62 62 62 62 59 56 59 56 54 59 59 59 59 59 59 62 62 62 62 59 59 62 62 62 62 59 62 59 62 59 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 49 49 49 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 59 59 62 62 62 62 62 62 62 56 62 59 59 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 49 47 62 62 62 62 62 62 62 62 56 62 62 54 49 47 49 62 62 62 56 56 62 62 43 62 62 62 62 62 54 62 62 62 56 56 62 43 47 62 62 62 62 62 62 62 47 62 56 56 62 47 62 62 62 62 62 62 62 62 62 62 56 56 62 56 62 56 47 56 62 41 62 56 46 62 52 35 62 54 49 54 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 43 62 62 58 58 54 52 58 54 58 45 58 54 58 45 46 52 58 54 52 49 58 41 58 58 58 58 49 45 54 52 58 54 58 54 58 44 54 54 58 54 54 54 58 52 52 52 58 42 45 54 46 54 52 47 54 47 54 58 58 52 50 48 45 16 49 50 50 50 46 19 38 48 48 47 49 58 31 58 48 51 52 58 35 51 51 54 53 53 39 58 58 58 58 51 58 34 58 50 51 51 58 36 51 50 46 58 54 58 50 58 52 53 52 51 32 44 48 38 37 41 26 51 50 50 50 54 22 51 51 50 58 50 51 28 46 42 50 50 51 20 46 50 50 49 51 47 34 49 39 51 50 51 25 51 46 22 50 42 46 18 54 32 49 53 44 15 35 37 39 44 54 23 44 39 42 47 46 29 32 49 24 49 49 51 25 54 37 41 23 49 20 54 40 44 35 40 39 17 51 40 53 42 37 19 54 35 34 33 35 7 28 32 54 37 45 24 44 26 33 35 54 32 52 32 32 12 40 40 31 47 32 31 32 22 33 40 40 32 32 33 30 9 41 36 36 40 34 29 32 51 21 27 46 20 27 31 22 25 25 24 46 25 33 33 30 31 45 32 45 30 31 31 51 26 46 30 18 26 29 31 31 31 32 43 29 42 42 33 29 41 29 31 30 22 24 38 30 31 28 31 42 34 42 38 31 29 37 30 33 29 31 31 30 31 42 34 42 25 17 24 22 27 19 32 29 31 19 26 36 32 27 32 30 41 24 41 31 17 25 23 27 38 20 15 33 31 27 28 24 27 26 32 26 24 31 31 41 36 27 21 44 22 26 19 26 31 35 20 30 14 22 22 32 32 21 37 31 23 38 44 24 28 31 35 24 33 30 26 31 19 31 22 16 27 31 17 12 17 22 32 10 19 31 12 15 17 19 19 22 15 32 34 22 30 23 20 26 17 18 28 23 29 48 33 33 15 13 31 19 20 34 32 34 34 31 29 13 9 21 22 17 11 15 20 17 10 8 11 26 31 38 34 34 34 15 7 21 16 21 11 19 4 9 32 20 24 47 22 14 13 22 8 28 18 22 8 14 11 6 11 17 3 15 20 27 24 8 15 32 29 21 13 29 21 16 8 18 7 12 9 8 22 34 24 18 15 9 27 10 22 30 29 30 23 23 9 28 14 21 9 30 19 8 10 14 25 14 7 3 19 6 23 20 16 9 12 13 12 8 12 17 17 13 11 8 6 3 3 9 11 4 10 10 10 10 12 7 6 5 4 6 9 16 10 12 6 6 3 13 4 7 17 4 5 11 28 27 26 17 2 1 3 2 5 17 9 11 25 8 14 7 7 5 15 6 10 8 5 11 4 3 5 2 9 6 6 17 5 7 13 3 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_129945745_129946808
seq2: B6Ng01-240L06.b_45_1108 (reverse)

seq1  AAACCCCAAAACCAAAC-AAACAAAAAAAGAGTTGCTTTGGTCATTGTGT  49
      | ||||||||||||||| |||||||||||||| ||||||||||||||| |
seq2  AGACCCCAAAACCAAACAAAACAAAAAAAGAG-TGCTTTGGTCATTGT-T  48

seq1  ATCTTATCTTCACAGCAATGGAAACTCTAAGACATGGTGGGATAAAGAAA  99
      ||| ||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATC-TATCTTCACAGCAATGGAAACTCTAAGACATGGTGGGAT-AAGAAA  96

seq1  ATAAAATTGACAGTTATTTTTGATTTCAAAACAAGAAATCAAATACAAAT  149
      ||||||||||||||||||||||||||| ||||| ||||||||||||||||
seq2  ATAAAATTGACAGTTATTTTTGATTTCCAAACAGGAAATCAAATACAAAT  146

seq1  TAACCAAAGGCAA-GTTAAT-CAAACATTTAGAGAGTCAAAATGTTTTCA  197
      ||||||||||||| |||||| |||||||||||||||||||||||||||||
seq2  TAACCAAAGGCAAGGTTAATCCAAACATTTAGAGAGTCAAAATGTTTTCA  196

seq1  AGGCTGTTAGCATGTCTCTGGTTGAACAAGTACTTGGACTCTGTAAATTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGTTAGCATGTCTCTGGTTGAACAAGTACTTGGACTCTGTAAATTA  246

seq1  ATGTGCTAATACATAGCGATCAGTTTAGAACCCAAAATGAACTGGAAATC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTAATACATAGCGATCAGTTTAGAACCCAAAATGAACTGGAAATC  296

seq1  TCAGTTGGTAACATTTTG-AAGTTTTTGACTAAGAACTGTCAAAAGATTT  346
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCAGTTGGTAACATTTTGAAAGTTTTTGACTAAGAACTGTCAAAAGATTT  346

seq1  ACTATGCATATTCAGAACCTAGACCTTTTAAAAAATAAGACACACATCAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGCATATTCAGAACCTAGACCTTTTAAAAAATAAGACACACATCAC  396

seq1  TATCACCACCAGCATCACCAGCATCACCAGCACCACTACCATCAAAGTGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACCACCAGCATCACCAGCATCACCAGCACCACTACCATCAAAGTGA  446

seq1  AAAAGGAGGCCTTGGTTAAAGAAAAAGTGTTGATGGGCTGGAGAGATAGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAGGCCTTGGTTAAAGAAAAAGTGTTGATGGGCTGGAGAGATAGC  496

seq1  TGAGTGGGTCATCTGATATCTTCTGGCCTCCATGGAGATTTGCACACAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGGGTCATCTGATATCTTCTGGCCTCCATGGAGATTTGCACACAAA  546

seq1  TGCACATACAAATACGTAAGTAAAACTCTTTTTTTAATTACAGAAAAAGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATACAAATACGTAAGTAAAACTCTTTTTTTAATTACAGAAAAAGG  596

seq1  ATGGAAGAAAAGTAAGAATTAGCAGGGTGTAGTGCCACACAACTTTAATC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGAAAAGTAAGAATTAGCAGGGTGTAGTGCCACACAACTTTAATC  646

seq1  TCAGCACTTGTAAGGCAGATGCAGACAGACCTCTGTACATTTGAAGCCAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCACTTGTAAGGCAGATGCAGACAGACCTCTGTACATTTGAAGCCAA  696

seq1  CCTATTATAAACAGTGAGATCCTGTCTCCCAAAACAAAAAATCAAAAGCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTATAAACAGTGAGATCCTGTCTCCCAAAACAAAAAATCAAAAGCA  746

seq1  GTAAAAATTGATTTGCTCAAATGGTTACATGGGAAAGAAAACTAGGGATG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAATTGATTTGCTCAAATGGTTACATGGGAAAGAAAACTAGGGATG  796

seq1  TAACTCAGTTGACAGAATGTTTGTCTAGCATGCAAGAGGCCCTGGGTTCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCAGTTGACAGAATGTTTGTCTAGCATGCAAGAGGCCCTGGGTTCC  846

seq1  ATCCCCAGCACTGTATAAACTGGGTAAGGTGGTGCATACTGGTCATCCAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAGCACTGTATAAACTGGGTAAGGTGGTGCATACTGGTCATCCAG  896

seq1  CACTCAGAAGGCTCATCTCTGTCTACATAGCCAACTGGAGGCCAGACTGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGAAGGCTCATCTCTGTCTACATAGCCAACTGGAGGCCAGACTGA  946

seq1  GCTACACAAGAGACGCTATTTCAAAGGGAACATGTCCAGTGGGTTATCTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACACAAGAGACGCTATTTCAAAGGGAACATGTCCAGTGGGTTATCTG  996

seq1  GGAGGTTGGCAGAAGCATGCAGTAGGTGGGTGTGATCTGAATATGTTGTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTTGGCAGAAGCATGCAGTAGGTGGGTGTGATCTGAATATGTTGTA  1046

seq1  TATACCTGTATGGAATTC  1064
      ||||||||||||||||||
seq2  TATACCTGTATGGAATTC  1064

seq1: chr1_129824769_129825878
seq2: B6Ng01-240L06.g_68_1174

seq1  GAATTCTTTGTAAGAAATATGTATCCATCTTTACTCAGGTGTTCAGTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTAAGAAATATGTATCCATCTTTACTCAGGTGTTCAGTGCA  50

seq1  GTACATTTCTAATGGAAGAAAAGGCCAGACAACCTAAATGTCAACATTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTTCTAATGGAAGAAAAGGCCAGACAACCTAAATGTCAACATTGT  100

seq1  GCTGCATGACTGTAAAGCTTTCTTCTAGAGTCGCTTATTGCTTTGTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCATGACTGTAAAGCTTTCTTCTAGAGTCGCTTATTGCTTTGTTTGA  150

seq1  GGTGGGGTATTGAGACATGAACCCAGGGCCTCATGTATTCCAGGCAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGTATTGAGACATGAACCCAGGGCCTCATGTATTCCAGGCAAGTG  200

seq1  CTCTGCCACTGAGCTACAGGTGCATACCTCAAGAACCTTAATGTAGAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCACTGAGCTACAGGTGCATACCTCAAGAACCTTAATGTAGAAAC  250

seq1  TGTGCGTGTTGGGCATGGTGGCAGATGTTTTTATTCCCATCACTCAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCGTGTTGGGCATGGTGGCAGATGTTTTTATTCCCATCACTCAGGAG  300

seq1  TCAAGAGGCAGAGGCAGAGGCACAGAGAGGCGCAGAGAGGCAGAGGCGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGGCAGAGGCAGAGGCACAGAGAGGCGCAGAGAGGCAGAGGCGCA  350

seq1  GAGAGGCAGAGAGAGAGAGAGGCAGAGAGAGAGAGAGAGAGGCAGAGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCAGAGAGAGAGAGAGGCAGAGAGAGAGAGAGAGAGGCAGAGGCA  400

seq1  GAGGCACAGAGAGGCAGAGAGAGAGAGGCAGAGAGAGAGAGGCAGAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCACAGAGAGGCAGAGAGAGAGAGGCAGAGAGAGAGAGGCAGAGAGA  450

seq1  GAGAGGCAGAGGCAGAGGCGCAGAGAGGCAGAGAGAGAGGCAGAGAGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCAGAGGCAGAGGCGCAGAGAGGCAGAGAGAGAGGCAGAGAGGCA  500

seq1  GAGAGAGAGAGGCAGAGAGAGAGGCAGAGAGAGAGAGGCAGAGGCACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGGCAGAGAGAGAGGCAGAGAGAGAGAGGCAGAGGCACAGA  550

seq1  GAGGCAGAGGCAGAGGCAAGAGGCAGAGGCAGAGGCAAGAGGCAGAGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGGCAGAGGCAAGAGGCAGAGGCAGAGGCAAGAGGCAGAGGCA  600

seq1  AGAGTCAGAGGCAGAGGCAGAGGCAAGAGGCAGAGGCAAGAGGCAGAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCAGAGGCAGAGGCAGAGGCAAGAGGCAGAGGCAAGAGGCAGAGGC  650

seq1  AAGAGGCAGAGGCAGAGGCAGAGACAAGAGGCAGAGGCAAGAGGCAGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGCAGAGGCAGAGGCAGAGACAAGAGGCAGAGGCAAGAGGCAGAGG  700

seq1  CAGAGGCTCAGAGAGGCAGAGGCGCAGAGAGGCAGAGGCGGACGCAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCTCAGAGAGGCAGAGGCGCAGAGAGGCAGAGGCGGACGCAGAGA  750

seq1  GGCAGAGGCAGAGGCAGAGGCAGGCAGATCTCTTGTGCATTGAGCTCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGCAGAGGCAGAGGCAGGCAGATCTCTTGTGCATTGAGCTCTGC  800

seq1  ATAGGAAGCTCCAGGCCAGCCAGAACTACATAGTTAAACCCTGTCTCAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAGCTCCAGGCCAGCCAGAACTACATAGTTAAACCCTGTCTCAGC  850

seq1  AAACAAACAAGATTAAGTCATAGAAACTGTATTAGTAACTAGGTGTTGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAAGATTAAGTCATAGAAACTGTATTAGTAACTAGGTGTTGTA  900

seq1  ATACAGCACAGAATGCTTTCAATTATGCTGATATGTAGGTATAGAAAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGCACAGAATGCTTTCAATTATGCTGATATGTAGGTATAGAAAAAA  950

seq1  GATTGGAGAGAAATACAGTCAAGTGGTAATAGTTTTCCCAGGTATGAAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGAGAGAAATACAGTCAAGTGGTAATAGTTTTCCCAGGTATGAAAG  1000

seq1  TACATTTTTGTTTGTTT-ATTTGTTTCATCTTTGTATTTCTTAAATTATC  1049
      ||||||||||||||||| |||||||||||| ||||| ||||   | ||||
seq2  TACATTTTTGTTTGTTTAATTTGTTTCATC-TTGTA-TTCT---AATATC  1045

seq1  TAT-GCATATACTTCTATTTGAAGAAAAATACCTTTAAAGT-ACTCTATA  1097
      ||| ||||||||||||||| |||||||||||| || ||||| ||||||||
seq2  TATGGCATATACTTCTATTGGAAGAAAAATACGTTGAAAGTAACTCTATA  1095

seq1  ATTTCAGGCATTA  1110
      | |||||||||||
seq2  A-TTCAGGCATTA  1107

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information