BAC Information

Click to search

BAC

Clone NameB6Ng01-241G24
Chromosome1 (Build37)
Map Location 151,480,273 - 151,481,378
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042792, LOC435647
Downstream geneLOC100042813, Pla2g4a, Ptgs2, LOC676712, LOC100043257, LOC100043261, Pdc, BC003331, Tpr, EG625534
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241G24.bB6Ng01-241G24.g
ACCGA051351GA051352
length1,095912
definitionB6Ng01-241G24.b B6Ng01-241G24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatgtgtgttatttctttaaggcagtaatagtgcaaaatggctt
tttatttttaaaattatttatgtttaatatgtattttggcatcatattca
tctattcatcacaagcatgcagtcatcacaaacaccagaagagggcatta
gatccctgggagctgcacttagagacaattctgagccatcattgtgggtg
atgggaattgaatcctggtcatctggtggagtagccaatgctcttaaccg
tcgaaccatgtctcttactccatgactttatttttttaattctattgaac
attagtaaaatagcaattagacatgatcaatgactgactgagtgtatttt
tcacattgaccctattagaaaatgtgggttttaaaatttgtttttggtgt
aaaagttttctcacttgatcattttcccttaaatgatctgcttaaaacta
tagagttggaactattcaagtgtttcagaatctatcttaaactaattgaa
attggcttattttttaattttttaattcattccaatgaaatgatttttgt
tttaatgataaataataaaactatatcagattattttatgatagcattaa
taattataaatatatttaatgaaatatattagcaagagaaatataccaac
ataaatataacagccagaaatagaaattcactggttgtctgaattaagta
tagctccattagacatgaattcaataaggaactgaaaacatggcttgctt
ttggtgcaccatgtaagatgtccatagacaactctatacttgaataaggt
ttcatatatccttaagaaatacatggcattattaaaaagacacagataaa
caggtttgttttaaaacatgctgtatctatctgttgcctccaaggaaaac
actccattgtcaaagaaatactatgctgagagaggtgaagagatatggca
agcagaatgatcacaaacaaatagactacttctctatgtctgacaaatag
acttcaacaaaattagataaaagagatttaacataccacttcattatgat
taaatgacattcattaaaaggcacattagaggaataaacatgtgt

gaattctttgtttagctctgagcaccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacagtgtcttttgccttacagaagctttgcaatttca
tgaggtcccatttgttgattctcaatcttacagaacaagccatttcaaga
actcctaaacctgataaacagcttcagtgaagtagctggatataaaatta
actcaaacaagtcaatggcctttctgtacacaaaggataaacaggctgag
aaagaaattagggaaacaacacccttctcaatagtcacaaataatataaa
ataccttggcgtgactctaactaaggaagtgaaagatctgtatgataaga
acttcaagtctctgaagaaagaaattaaagaaatctttctcagaagatgg
aaagatctccaaggctcatggattggcaggatcaatatagtaaaaatggc
tatcttgccaaaagcaatctacagattcaatgcaatccccatcaaaattc
caactcaattcttcaatgaattagaaagggcaatctgcaaattcatctgg
aataacaaaagtcctaggatagcaaaaactcttctcaaggataaaagaac
ctctggtggaatcaccctgcctgacctaaagctgtactacagagcaattg
tgataaaaactgcatggtactggtatagagacagacaagtagaccaatgg
aatagaattgaagacccagaaatgaacccacacacttgatctttgacaag
ggagctaaaaccatccagtggaaaaaagacagcattttcaacaaatggtg
ctggcacactgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_151480273_151481378
seq2: B6Ng01-241G24.b_47_1141

seq1  GAATTCAATGTGTGTTATTTCTTTAAGGCAGTAATAGTGCAAAATGGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGTGTGTTATTTCTTTAAGGCAGTAATAGTGCAAAATGGCTT  50

seq1  TTTATTTTTAAAATTATTTATGTTTAATATGTATTTTGGCATCATATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTAAAATTATTTATGTTTAATATGTATTTTGGCATCATATTCA  100

seq1  TCTATTCATCACAAGCATGCAGTCATCACAAACACCAGAAGAGGGCATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCATCACAAGCATGCAGTCATCACAAACACCAGAAGAGGGCATTA  150

seq1  GATCCCTGGGAGCTGCACTTAGAGACAATTCTGAGCCATCATTGTGGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCTGGGAGCTGCACTTAGAGACAATTCTGAGCCATCATTGTGGGTG  200

seq1  ATGGGAATTGAATCCTGGTCATCTGGTGGAGTAGCCAATGCTCTTAACCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAATTGAATCCTGGTCATCTGGTGGAGTAGCCAATGCTCTTAACCG  250

seq1  TCGAACCATGTCTCTTACTCCATGACTTTATTTTTTTAATTCTATTGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACCATGTCTCTTACTCCATGACTTTATTTTTTTAATTCTATTGAAC  300

seq1  ATTAGTAAAATAGCAATTAGACATGATCAATGACTGACTGAGTGTATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTAAAATAGCAATTAGACATGATCAATGACTGACTGAGTGTATTTT  350

seq1  TCACATTGACCCTATTAGAAAATGTGGGTTTTAAAATTTGTTTTTGGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTGACCCTATTAGAAAATGTGGGTTTTAAAATTTGTTTTTGGTGT  400

seq1  AAAAGTTTTCTCACTTGATCATTTTCCCTTAAATGATCTGCTTAAAACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTTTCTCACTTGATCATTTTCCCTTAAATGATCTGCTTAAAACTA  450

seq1  TAGAGTTGGAACTATTCAAGTGTTTCAGAATCTATCTTAAACTAATTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTTGGAACTATTCAAGTGTTTCAGAATCTATCTTAAACTAATTGAA  500

seq1  ATTGGCTTATTTTTTAATTTTTTAATTCATTCCAATGAAATGATTTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTTATTTTTTAATTTTTTAATTCATTCCAATGAAATGATTTTTGT  550

seq1  TTTAATGATAAATAATAAAACTATATCAGATTATTTTATGATAGCATTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGATAAATAATAAAACTATATCAGATTATTTTATGATAGCATTAA  600

seq1  TAATTATAAATATATTTAATGAAATATATTAGCAAGAGAAATATACCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATAAATATATTTAATGAAATATATTAGCAAGAGAAATATACCAAC  650

seq1  ATAAATATAACAGCCAGAAATAGAAATTCACTGGTTGTCTGAATTAAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATAACAGCCAGAAATAGAAATTCACTGGTTGTCTGAATTAAGTA  700

seq1  TAGCTCCATTAGACATGAATTCAATAAGGAACTGAAAACATGGCTTGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCCATTAGACATGAATTCAATAAGGAACTGAAAACATGGCTTGCTT  750

seq1  TTGGTGCACCATGTAAGATGTCCATAGACAACTCTATACTTGAATAAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGCACCATGTAAGATGTCCATAGACAACTCTATACTTGAATAAGGT  800

seq1  TTCATATATCCTTAAGAAATACATGGCATTATTAAAAAGACACAGATAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATATCCTTAAGAAATACATGGCATTATTAAAAAGACACAGATAAA  850

seq1  CAGGTTTGTTTTAAAACATGCTGTATCTATCTGTTGCCTCCAAGGAAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTGTTTTAAAACATGCTGTATCTATCTGTTGCCTCCAAGGAAAAC  900

seq1  ACTCCATTGTCAAAGAAATACTATGCTGAGAGAGGTGAAGAAGATATGGC  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACTCCATTGTCAAAGAAATACTATGCTGAGAGAGGTGAAG-AGATATGGC  949

seq1  AAGCAGAATGAACCACAAAACAAATAAGAACTACTTCTCTAATGTCTGAC  1000
      |||||||||| | ||| |||||||||   ||||||||||| |||||||||
seq2  AAGCAGAATG-ATCAC-AAACAAATA--GACTACTTCTCT-ATGTCTGAC  994

seq1  AAAATAGACTTCAAACAAAAATTAGATAAAAGAGATTTTAACATACCACT  1050
       |||||||||||||   |||||||||||||||||| ||||||||||||||
seq2  -AAATAGACTTCAA--CAAAATTAGATAAAAGAGA-TTTAACATACCACT  1040

seq1  TCATTATGATTAAATGAACAATCCATTAAAA-GCACATTAGAGGAATAAA  1099
      |||||||||||||||||   || |||||||| ||||||||||||||||||
seq2  TCATTATGATTAAATGA--CATTCATTAAAAGGCACATTAGAGGAATAAA  1088

seq1  CATGTGT  1106
      |||||||
seq2  CATGTGT  1095


| Home | SequenceCutter | Blast | Download |