BAC Information

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BAC

Clone NameB6Ng01-241K07
Chromosome1 (Build37)
Map Location 75,571,532 - 75,766,936
singlet/doubletdoublet
Overlap geneLOC383531
Upstream geneUsp37, Rqcd1, Plcd4, Zfp142, Bcs1l, Rnf25, Stk36, Ttll4, Cyp27a1, Prkag3, Wnt6, Wnt10a, LOC100042901, Cdk5r2, Fev, Cryba2, Ccdc108, Ihh, Nhej1, Slc23a3, 1810031K17Rik, BC038286, Zfand2b, Abcb6, Atg9a, D1Ertd161e, Stk16, Tuba4a, A630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik, AW822216, Inha, Stk11ip, Slc4a3, LOC100039069
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241K07.bB6Ng01-241K07.g
ACCGA051504GA051505
length1,190980
definitionB6Ng01-241K07.b B6Ng01-241K07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,571,532 - 75,572,711)(75,766,101 - 75,766,936)
sequence
gaattcaagtcatcaattttcttaatgtagctaccacgggttgatgctgg
gtgaataagaagaatggcccacttcacgggtccagcaggctttgatctgg
agagcaaacgtttgaagaacagatggcaggacactaagggtgagaaatgt
cccgtggcacaatctgttttaagaatagctggcaccagtcaaaacctggg
tgacattcctctggccagtctgactcagaggcagctcatagctagtgcct
tgtatacattaggagcttactatatgttttaatcagcagctgtctggaaa
tccttcagattcagcgaaaccttcaaaatctatctagactccgatgctca
gtaactccttaactgctgttatcatggtctgattcccctaccatctttga
cctggccgcctccaccagccttaaaactggtctttctgcatctaccctca
ggttctagaggagtttattcttttttatatacacgtttaaaatcttttac
atctaatcttttatttacttaatatgtttgaggaggagagcgcacgtgcc
acaggacatgtgtggggtaagagcacagcctttgagaatcagctctctcc
ttctaccgtattggtcctggggatcgaactcaggtcatcaggcttggtga
caaacacttctacacattaggccctcttgctggccccaaaattcttttta
aacacagtaagtgtcttaatctgtttctttttgctgtaacacgatacggg
agacttgttaatttataaagaaaaacatttctctggctcatgattatgga
gtttggaaatctaagaggaaggcacagacttgtccttggcatctggagag
ggactttcatgagatcatatagaacagcggaagatattgtgtggtgagat
ggagtacacacaccagtgtgcttctctcttctgtccttataaagctacta
atgttattaaaggaccccataccacccttcatagtcttattcagccttaa
ttattcccccaaggaccccactgccaagtgccatcggtgtattgaaatta
ggggacctaggttccaatataagaaggctctaggggggattgcaattcca
attcatgaccacgcctaaggaagtcattaagaatatcataccgccacatc
gcgtgtctgagaaacttgtcctggaagcacccattctcac
gaattcaaaataaataaatcatttttaagtcaagatagaaaattttctat
cctttaagaaagcgagatcacatggagggggtaagggggcttcggagaaa
gagtgaagtctgaagtgtcagaaaaacatacataggacaagatcaaagaa
gggaaagggggaagttacatttttctgagtaactcagaaaaacggacaga
cttacaaagctgcatgcatatggttctgaaagagagtgtactggggcagg
aattctagcaaggagaagtatatcctctccttaaagagataattattcct
cctgtctctttctcatgacttaaggtgttggtctcttgggcagatgatta
acatgcccaactggaatgttaggcttccactcgggtcagagattcagttc
tcttaaccagaagatgttttcccttaatgagcttcagtgcaaccatactg
atggcccagtcagtaaaaggcctgctccataaacagtaagacctaactag
acccacatagaaggtaggagcagaagaacatgtctataacaccagcgctg
gaggggcagagacaggtagatccctgaagttcacaggccagccggcctga
ccatatttgataaactcaaggtcagtgggagatcctgtcccagaaacaag
gtgggcaaggttcaggaaacatctcagaagaggaggtggacacaacataa
aagcaggatgggaagaagggctgtggggagccgtcttctgacagcacacg
gaacaggctgtggaatgctatcttctggatagtacatggacatgatgctg
atgaacttagcagctgtgcttgcacaagagttagacgagatcaagccaac
cagaattttacaccattggaaagaggtgtcctccagggcccactcctacc
gaggaatgtttggcaaatagctgcagggaggggaaatcattatttttaag
gtgtggccatcatagatttcccatgttcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_75571532_75572711
seq2: B6Ng01-241K07.b_47_1236

seq1  GAATTCAAGTCATCAATTTTCTTAATGTAGCTACCACGGGTTGATGCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTCATCAATTTTCTTAATGTAGCTACCACGGGTTGATGCTGG  50

seq1  GTGAATAAGAAGAATGGCCCACTTCACGGGTCCAGCAGGCTTTGATCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATAAGAAGAATGGCCCACTTCACGGGTCCAGCAGGCTTTGATCTGG  100

seq1  AGAGCAAACGTTTGAAGAACAGATGGCAGGACACTAAGGGTGAGAAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAACGTTTGAAGAACAGATGGCAGGACACTAAGGGTGAGAAATGT  150

seq1  CCCGTGGCACAATCTGTTTTAAGAATAGCTGGCACCAGTCAAAACCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTGGCACAATCTGTTTTAAGAATAGCTGGCACCAGTCAAAACCTGGG  200

seq1  TGACATTCCTCTGGCCAGTCTGACTCAGAGGCAGCTCATAGCTAGTGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTCCTCTGGCCAGTCTGACTCAGAGGCAGCTCATAGCTAGTGCCT  250

seq1  TGTATACATTAGGAGCTTACTATATGTTTTAATCAGCAGCTGTCTGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACATTAGGAGCTTACTATATGTTTTAATCAGCAGCTGTCTGGAAA  300

seq1  TCCTTCAGATTCAGCGAAACCTTCAAAATCTATCTAGACTCCGATGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCAGATTCAGCGAAACCTTCAAAATCTATCTAGACTCCGATGCTCA  350

seq1  GTAACTCCTTAACTGCTGTTATCATGGTCTGATTCCCCTACCATCTTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTCCTTAACTGCTGTTATCATGGTCTGATTCCCCTACCATCTTTGA  400

seq1  CCTGGCCGCCTCCACCAGCCTTAAAACTGGTCTTTCTGCATCTACCCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCCGCCTCCACCAGCCTTAAAACTGGTCTTTCTGCATCTACCCTCA  450

seq1  GGTTCTAGAGGAGTTTATTCTTTTTTATATACACGTTTAAAATCTTTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTAGAGGAGTTTATTCTTTTTTATATACACGTTTAAAATCTTTTAC  500

seq1  ATCTAATCTTTTATTTACTTAATATGTTTGAGGAGGAGAGCGCACGTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATCTTTTATTTACTTAATATGTTTGAGGAGGAGAGCGCACGTGCC  550

seq1  ACAGGACATGTGTGGGGTAAGAGCACAGCCTTTGAGAATCAGCTCTCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGACATGTGTGGGGTAAGAGCACAGCCTTTGAGAATCAGCTCTCTCC  600

seq1  TTCTACCGTATTGGTCCTGGGGATCGAACTCAGGTCATCAGGCTTGGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCGTATTGGTCCTGGGGATCGAACTCAGGTCATCAGGCTTGGTGA  650

seq1  CAAACACTTCTACACATTAGGCCCTCTTGCTGGCCCCAAAATTCTTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACTTCTACACATTAGGCCCTCTTGCTGGCCCCAAAATTCTTTTTA  700

seq1  AACACAGTAACTGTCTTAATCTGTTTCTTTTTGCTGTAACACGATACGGG  750
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AACACAGTAAGTGTCTTAATCTGTTTCTTTTTGCTGTAACACGATACGGG  750

seq1  AGACTTGTTAATTTATAAAGAAAAACATTTCTCTGGCTCATGATTATGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGTTAATTTATAAAGAAAAACATTTCTCTGGCTCATGATTATGGA  800

seq1  GTTTGGAAATCTAAGAGGAAGGCACAGACTTGTCCTTGGCATCTGGAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGAAATCTAAGAGGAAGGCACAGACTTGTCCTTGGCATCTGGAGAG  850

seq1  GGAC-TTCATGAGATCATATAGAACAGCGGAAGATATTGTGTGGTGAGAT  899
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTCATGAGATCATATAGAACAGCGGAAGATATTGTGTGGTGAGAT  900

seq1  GGAGTACACACACCAGTGTGCTTCTCTCTTTCTGTTCTTATAAAGCTACT  949
      |||||||||||||||||||||||||||| |||||| ||||||||||||||
seq2  GGAGTACACACACCAGTGTGCTTCTCTC-TTCTGTCCTTATAAAGCTACT  949

seq1  AATGTTATTAAGGGACCCCATACCACCC-TCATAGTCTTATTCAGCCTTA  998
      ||||||||||| |||||||||||||||| |||||||||||||||||||||
seq2  AATGTTATTAAAGGACCCCATACCACCCTTCATAGTCTTATTCAGCCTTA  999

seq1  ATTATTCCCCCAA-GACCCCACTGCCAAGTGCCATCGGTGTA-TGAATTT  1046
      ||||||||||||| |||||||||||||||||||||||||||| |||| ||
seq2  ATTATTCCCCCAAGGACCCCACTGCCAAGTGCCATCGGTGTATTGAAATT  1049

seq1  A-GGGACTAAGTTTTCAATAT-AGAA-GCTCTAGGGGG--ATGCA--TTC  1089
      | |||||  || || |||||| |||| |||||||||||   ||||  | |
seq2  AGGGGACCTAGGTTCCAATATAAGAAGGCTCTAGGGGGGATTGCAATTCC  1099

seq1  AAATCATGACAACAGCTAAGGGAAGTCATTTAAAGAAAAATCATAACGCC  1139
      || ||||||| ||  |||| ||||||||||  ||| || |||||| ||||
seq2  AATTCATGACCACGCCTAA-GGAAGTCATT--AAG-AATATCATACCGCC  1145

seq1  ACATCGCTGTTCTGAGAACC---TGCTGGAAGCACCCA-TCTCAC  1180
      |||||||   |||||||| |   | ||||||||||||| ||||||
seq2  ACATCGCGTGTCTGAGAAACTTGTCCTGGAAGCACCCATTCTCAC  1190

seq1: chr1_75766101_75766936
seq2: B6Ng01-241K07.g_64_898 (reverse)

seq1  TCTAACTCTTGTGCAAGCACAGCTGCTAAGTTCATCAGCATCATGTCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACTCTTGTGCAAGCACAGCTGCTAAGTTCATCAGCATCATGTCCAT  50

seq1  GTACTATCCAGAAGATAGCATTCCACAGCCTGTTCCGTGTGCTGTTCAGA  100
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTACTATCCAGAAGATAGCATTCCACAGCCTGTTCCGTGTGCTG-TCAGA  99

seq1  AGACGGCTCCCCACAGCCCTTCTTCCCATCCTGCTTTTATGTTGTGTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGGCTCCCCACAGCCCTTCTTCCCATCCTGCTTTTATGTTGTGTCCA  149

seq1  CCTCCTCTTCTGAGATGTTTCCTGAACCTTGCCCACCTTGTTTCTGGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCTTCTGAGATGTTTCCTGAACCTTGCCCACCTTGTTTCTGGGAC  199

seq1  AGGATCTCCCACTGACCTTGAGTTTATCAAATATGGTCAGGCCGGCTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTCCCACTGACCTTGAGTTTATCAAATATGGTCAGGCCGGCTGGC  249

seq1  CTGTGAACTTCAGGGATCTACCTGTCTCTGCCCCTCCAGCGCTGGTGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAACTTCAGGGATCTACCTGTCTCTGCCCCTCCAGCGCTGGTGTTA  299

seq1  TAGACATGTTCTTCTGCTCCTACCTTCTATGTGGGTCTAGTTAGGTCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATGTTCTTCTGCTCCTACCTTCTATGTGGGTCTAGTTAGGTCTTA  349

seq1  CTGTTTATGGAGCAGGCCTTTTACTGACTGGGCCATCAGTATGGTTGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTATGGAGCAGGCCTTTTACTGACTGGGCCATCAGTATGGTTGCAC  399

seq1  TGAAGCTCATTAAGGGAAAACATCTTCTGGTTAAGAGAACTGAATCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTCATTAAGGGAAAACATCTTCTGGTTAAGAGAACTGAATCTCTG  449

seq1  ACCCGAGTGGAAGCCTAACATTCCAGTTGGGCATGTTAATCATCTGCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGAGTGGAAGCCTAACATTCCAGTTGGGCATGTTAATCATCTGCCCA  499

seq1  AGAGACCAACACCTTAAGTCATGAGAAAGAGACAGGAGGAATAATTATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACCAACACCTTAAGTCATGAGAAAGAGACAGGAGGAATAATTATCT  549

seq1  CTTTAAGGAGAGGATATACTTCTCCTTGCTAGAATTCCTGCCCCAGTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGGAGAGGATATACTTCTCCTTGCTAGAATTCCTGCCCCAGTACA  599

seq1  CTCTCTTTCAGAACCATATGCATGCAGCTTTGTAAGTCTGTCCGTTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTCAGAACCATATGCATGCAGCTTTGTAAGTCTGTCCGTTTTTC  649

seq1  TGAGTTACTCAGAAAAATGTAACTTCCCCCTTTCCCTTCTTTGATCTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTACTCAGAAAAATGTAACTTCCCCCTTTCCCTTCTTTGATCTTGT  699

seq1  CCTATGTATGTTTTTCTGACACTTCAGACTTCACTCTTTCTCCGAAGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGTATGTTTTTCTGACACTTCAGACTTCACTCTTTCTCCGAAGCCC  749

seq1  CCTTACCCCCTCCATGTGATCTCGCTTTCTTAAAGGATAGAAAATTTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACCCCCTCCATGTGATCTCGCTTTCTTAAAGGATAGAAAATTTTCT  799

seq1  ATCTTGACTTAAAAATGATTTATTTATTTTGAATTC  836
      ||||||||||||||||||||||||||||||||||||
seq2  ATCTTGACTTAAAAATGATTTATTTATTTTGAATTC  835