BAC Information

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BAC

Clone NameB6Ng01-242H16
Chromosome1 (Build37)
Map Location 68,787,325 - 68,788,518
singlet/doubletsinglet
Overlap geneErbb4
Upstream genenone
Downstream geneLOC667842, EG241084, Ikzf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242H16.bB6Ng01-242H16.g
ACCGA052110GA052111
length9481,190
definitionB6Ng01-242H16.b B6Ng01-242H16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagagacccccaaattcaatcta
agagtgattgtttacctctataacagttgttgccaataatgaacgtgcag
gcttaacctacttagcactttattttcatagattgtaaagcatcagccag
gtaaggcaactgagcacttttcaccctgaaaaccctgcatagcaccttcc
atcagtatgactgctatctggcaagatgaaggcatctttgttccaactgt
atttctctatatcatccaaccaagatgtatggtatcttcagaaatagggt
cataattcctagttctggaggaatcaagagcaataacgagagcctatcct
gttttgtgagatcctatgacctccctgaacagtgattcataaggagttag
gcaacatgtggcactggggtttttgtttaatggcacataactccaaagag
aagcattttattttagccacacagagtatgttggttttttttttcaactt
gacatacagacacattggaagggtaaccatgtattggttaattactttca
tcaggttggcctatgggcaagtgtggggaattttttttttttattact

gaattctttaatttatcctttaagaaaataaatttgtaataattgcattt
tctgtgcttgtacaaaagcacacaagaggatgatttaatctaatacacac
acacacacatacacacacacacacacacacacacatatatatataaaatt
tggaatatatagtttatcctattttttgataattatctccatgtaactaa
gactgaaagattagagcaacaacatttaaaagttatttcaataccataca
gtaagctgttctagcacatcatgttagcgatacatatatgcacataaaac
ccaacctcaaaaataccatttttaaaatgtgttaagtaagcatcttgata
taaatattttttaaagtatgccagaaataagtttgtaacaaattgctgat
attaactgagttatccacacgcatcttcatgtatgttcaaagaaagtggt
ctgctggtgcacataataatattccacatttgatcagtgggttatgtttt
tgttcatatgtaagcccatgaagatacacatagagatgcctctgttgcgt
gtatactggtacctattttttcttgcacactcattttaaatattattttt
cagaatacaaaaatacagtatataaacacatctgtacagagaaatgtaca
tttaatatgcattactttctatacatgacttggtacagattaattttcaa
taggcgaaaacattggaatatgaatttcacaaaattacccatcaacttaa
agggtgtattatgtatgtgttttcttaaagtaagttacatagtataccca
gaataaaacacaaataacatcaaagatgctgcagacagagattgatagag
aagtcaaaacacaatttcttgtcttatatagagaactgacaataacaatg
ggggtaggatacagcagatgggagaaaatatcctgtggaatgcttcctaa
tatttaagactatctaaagcctattttttcctataagtacatcaaaaata
acaaaaaaaatgtaaaagttttgaaggctctagatgaaatcacagcacta
tgtgaggttgggaaaacatgactatgacaagtctatagaggggatatccc
atcagagctcatctactccatgtccatgatgatccatggctaatccacga
aacacatcatcaacgcgccacaagtggtccatataaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_68787325_68788518
seq2: B6Ng01-242H16.g_64_1253

seq1  GAATTCTTTAATTTATCCTTTAAGAAAATAAATTTGTAATAATTGCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAATTTATCCTTTAAGAAAATAAATTTGTAATAATTGCATTT  50

seq1  TCTGTGCTTGTACAAAAGCACACAAGAGGATGATTTAATCTAATACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCTTGTACAAAAGCACACAAGAGGATGATTTAATCTAATACACAC  100

seq1  ACACACACATACACACACACACACACACACACACATATATATATAAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACATACACACACACACACACACACACACATATATATATAAAATT  150

seq1  TGGAATATATAGTTTATCCTATTTTTTGATAATTATCTCCATGTAACTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATATATAGTTTATCCTATTTTTTGATAATTATCTCCATGTAACTAA  200

seq1  GACTGAAAGATTAGAGCAACAACATTTAAAAGTTATTTCAATACCATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAAAGATTAGAGCAACAACATTTAAAAGTTATTTCAATACCATACA  250

seq1  GTAAGCTGTTCTAGCACATCATGTTAGCGATACATATATGCACATAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCTGTTCTAGCACATCATGTTAGCGATACATATATGCACATAAAAC  300

seq1  CCAACCTCAAAAATACCATTTTTAAAATGTGTTAAGTAAGCATCTTGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCTCAAAAATACCATTTTTAAAATGTGTTAAGTAAGCATCTTGATA  350

seq1  TAAATATTTTTTAAAGTATGCCAGAAATAAGTTTGTAACAAATTGCTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTTTTTAAAGTATGCCAGAAATAAGTTTGTAACAAATTGCTGAT  400

seq1  ATTAACTGAGTTATCCACACGCATCTTCATGTATGTTCAAAGAAAGTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTGAGTTATCCACACGCATCTTCATGTATGTTCAAAGAAAGTGGT  450

seq1  CTGCTGGTGCACATAATAATATTCCACATTTGATCAGTGGGTTATGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGTGCACATAATAATATTCCACATTTGATCAGTGGGTTATGTTTT  500

seq1  TGTTCATATGTAAGCCCATGAAGATACACATAGAGATGCCTCTGTTGCGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATATGTAAGCCCATGAAGATACACATAGAGATGCCTCTGTTGCGT  550

seq1  GTATACTGGTACCTATTTTTTCTTGCACACTCATTTTAAATATTATTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACTGGTACCTATTTTTTCTTGCACACTCATTTTAAATATTATTTTT  600

seq1  CAGAATACAAAAATACAGTATATAAACACATCTGTACAGAGAAATGTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATACAAAAATACAGTATATAAACACATCTGTACAGAGAAATGTACA  650

seq1  TTTAATATGCATTACTTTCTATACATGACTTGGTACAGATTAATTTTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATATGCATTACTTTCTATACATGACTTGGTACAGATTAATTTTCAA  700

seq1  TAGGCGAAAACATTGGAATATGAATTTCACAAAATTACCCATCAACTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCGAAAACATTGGAATATGAATTTCACAAAATTACCCATCAACTTAA  750

seq1  AGGGTGTATTATGTATGTGTTTTCTTAAAGTAAGTTACATAGTATACCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGTATTATGTATGTGTTTTCTTAAAGTAAGTTACATAGTATACCCA  800

seq1  GAATAAAACACAAATAACATCAAAGATGCTGCAGACAGAGATTGATAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAACACAAATAACATCAAAGATGCTGCAGACAGAGATTGATAGAG  850

seq1  AAGTCAAAACACAATTTCTTGTCTTATATAGAGAACTGACAAATAACAAT  900
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAGTCAAAACACAATTTCTTGTCTTATATAGAGAACTGAC-AATAACAAT  899

seq1  GGGGGTAGGATACAGCAGATGGGAGAAAATAATCCTGTGGAATGCTTCCT  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGGGGTAGGATACAGCAGATGGGAGAAAAT-ATCCTGTGGAATGCTTCCT  948

seq1  AATATTTAAGACTATCTTAAAGCCTA-TTTTTCCTATAAGTACATCAAAA  999
      |||||||||||||||| ||||||||| |||||||||||||||||||||||
seq2  AATATTTAAGACTATC-TAAAGCCTATTTTTTCCTATAAGTACATCAAAA  997

seq1  ATAAC-AAAAAAATGTAAAAGTTTTGAAGGCTCTAGATGAAATCCACAGC  1048
      ||||| ||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATAACAAAAAAAATGTAAAAGTTTTGAAGGCTCTAGATGAAAT-CACAGC  1046

seq1  ACTATTGTGAGGTTGGGAAAACATTGACTAATGGACAAAGTCTATAGA-G  1097
      |||| |||||||||||||||||| ||||||   ||| ||||||||||| |
seq2  ACTA-TGTGAGGTTGGGAAAACA-TGACTA--TGAC-AAGTCTATAGAGG  1091

seq1  GGATATCCCAATCCAAGAGCTTCATCTACTCCATTGTCCATTGATGATAC  1147
      ||||||||| |||  ||||| |||||||||||| |||||| ||||||| |
seq2  GGATATCCC-ATC--AGAGC-TCATCTACTCCA-TGTCCA-TGATGAT-C  1134

seq1  AATGCCTAA-CCAC-AGACACA-CATTCACG---CACA---TGTCCATAT  1188
       ||| |||| |||| | ||||| |||  |||   ||||    ||||||||
seq2  CATGGCTAATCCACGAAACACATCATCAACGCGCCACAAGTGGTCCATAT  1184

seq1  AATATG  1194
      || |||
seq2  AAAATG  1190


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