BAC Information

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BAC

Clone NameB6Ng01-242K14
Chromosome1 (Build37)
Map Location 75,596,398 - 75,756,129
singlet/doubletdoublet
Overlap geneLOC383531
Upstream genePlcd4, Zfp142, Bcs1l, Rnf25, Stk36, Ttll4, Cyp27a1, Prkag3, Wnt6, Wnt10a, LOC100042901, Cdk5r2, Fev, Cryba2, Ccdc108, Ihh, Nhej1, Slc23a3, 1810031K17Rik, BC038286, Zfand2b, Abcb6, Atg9a, D1Ertd161e, Stk16, Tuba4a, A630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik, AW822216, Inha, Stk11ip, Slc4a3, LOC100039069
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242K14.bB6Ng01-242K14.g
ACCGA052247GA052248
length1,067930
definitionB6Ng01-242K14.b B6Ng01-242K14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,596,398 - 75,597,467)(75,755,606 - 75,756,129)
sequence
gaattctttcttagtcatgctgaaacagaagactcattcttaccttgctc
ttggtacataaataaaccacaggttggagcttgctatcaacaccacaagc
ctttccctaagcctgccagtgtgtatctctcagaccctaggtcacttcca
agctgcagaatcagttaacaagttcaggaagtttgtcatgttacagtagc
cctgcctgactctgtggaggtgccttagaaatagagatgtctctgcctgg
ggtagaagctacccaaatataaaagatctaatccagttggacaggccaat
cgcctggctaagggaccacctctcagggagatggggctacctgtaggaag
acagatatactttaagccatgataaagggccaggagaaagaattatccct
ttgatgcgatagagaacattttcttcctgccccctaagggcagtttctta
gagaaccacaggcatatagctcttaactttgctgactcacctggaaaagc
ctccttttttcctgttctcctctcttttctaagtttgcttccctgacacc
ttggccgtgacgctcccttccctatcacagagctgcttatcttttgacct
ccctccatgctggtttaactccagcagacttacactttcttctccatttt
cctcctccaggaagctacctgcatttacatctttctcgtcctggggctac
taaagttgtctttgagcttcggtttgagtcggattttaaatgcgtttact
gatgagactggtttccttggtgtcatgctaccctgggtcctctaaacagg
accattggaaaggtaacccaactaccacatccagtgaccccatccaacac
agggaacctgatcatttccccaattttgtaagtggcagtaaaggttacct
ctcctgagacgggagtgaccaggacagtggggaggagaggccattgctgt
aagaggagggggctcaactcgtggtcttgccataaatcagaaatgtcgtc
ttcatttcctagcctggctgtcagccagaaatacaaaaaagttttggctc
tgatcctgttttgtctc
gaattcaatttatacatcttgtacaacaatagccaaaatgtaggagccac
ccaaatgcccctccataaataaatggataaacaaaatatgatatatatat
atatacattctatgaaatattttattagtctaaaagagggatgaaattca
gatatatgctaaccatgggttgaggacattatgctaagggaaataagaca
gacacaaagggacaatgttatttgatttcacatgcatgagtatataaaag
aagcaaacccatataagtaaaaaataggatcaaggttaataggggctaga
aggagggatattcgggagtcagtgcattaaattaattaaagggacaaagt
ttatatttggagtgatttttttttaagttccagaaattaacatttatggc
cactctaccatgtgagtgtgtttaatagcactagacatgttaaatgagat
atttgtgtaaacccaaattttaaaaaaatgttaatcagaaagaatgatgc
tgttactacacgacttattccatctgatattacagagtgacagcactcag
cacagcctggtaccggcacaaaaacagacatttaaactaagaaaacataa
tagaaggcccagcagatgaatctacatgttcacagaaaatggatcactag
cacaagttgcaggaaaataaaggaaagacggttgtcaatgacccatgctg
ggaaagctaggtttccaggttcagataaatgaaattgcacccatttggct
ccacactgtactaaaatcaatttaacgtacactagaaggttaagcacaag
gcctgaatctgtgaacttattagaagaaaacataggggagtcgtctgaag
atttttctgagcaatgagttttgtttgtttccttggtttgtttgtttgct
tgttttcttactataaccccaaagcacatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_75596398_75597467
seq2: B6Ng01-242K14.b_46_1112

seq1  GAATTCTTTCTTAGTCATGCTGAAACAGAAGACTCATTCTTACCTTGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTAGTCATGCTGAAACAGAAGACTCATTCTTACCTTGCTC  50

seq1  TTGGTACATAAATAAACCACAGGTTGGAGCTTGCTATCAACACCACAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTACATAAATAAACCACAGGTTGGAGCTTGCTATCAACACCACAAGC  100

seq1  CTTTCCCTAAGCCTGCCAGTGTGTATCTCTCAGACCCTAGGTCACTTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCTAAGCCTGCCAGTGTGTATCTCTCAGACCCTAGGTCACTTCCA  150

seq1  AGCTGCAGAATCAGTTAACAAGTTCAGGAAGTTTGTCATGTTACAGTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCAGAATCAGTTAACAAGTTCAGGAAGTTTGTCATGTTACAGTAGC  200

seq1  CCTGCCTGACTCTGTGGAGGTGCCTTAGAAATAGAGATGTCTCTGCCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTGACTCTGTGGAGGTGCCTTAGAAATAGAGATGTCTCTGCCTGG  250

seq1  GGTAGAAGCTACCCAAATATAAAAGATCTAATCCAGTTGGACAGGCCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAAGCTACCCAAATATAAAAGATCTAATCCAGTTGGACAGGCCAAT  300

seq1  CGCCTGGCTAAGGGACCACCTCTCAGGGAGATGGGGCTACCTGTAGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTGGCTAAGGGACCACCTCTCAGGGAGATGGGGCTACCTGTAGGAAG  350

seq1  ACAGATATACTTTAAGCCATGATAAAGGGCCAGGAGAAAGAATTATCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATATACTTTAAGCCATGATAAAGGGCCAGGAGAAAGAATTATCCCT  400

seq1  TTGATGCGATAGAGAACATTTTCTTCCTGCCCCCTAAGGGCAGTTTCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGCGATAGAGAACATTTTCTTCCTGCCCCCTAAGGGCAGTTTCTTA  450

seq1  GAGAACCACAGGCATATAGCTCTTAACTTTGCTGACTCACCTGGAAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACCACAGGCATATAGCTCTTAACTTTGCTGACTCACCTGGAAAAGC  500

seq1  CTCCTTTTTTCCTGTTCTCCTCTCTTTTCTAAGTTTGCTTCCCTGACACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTTTTCCTGTTCTCCTCTCTTTTCTAAGTTTGCTTCCCTGACACC  550

seq1  TTGGCCGTGACGCTCCCTTCCCTATCACAGAGCTGCTTATCTTTTGACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCGTGACGCTCCCTTCCCTATCACAGAGCTGCTTATCTTTTGACCT  600

seq1  CCCTCCATGCTGGTTTAACTCCAGCAGACTTACACTTTCTTCTCCATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCATGCTGGTTTAACTCCAGCAGACTTACACTTTCTTCTCCATTTT  650

seq1  CCTCCTCCAGGAAGCTACCTGCATTTACATCTTTCTCGTCCTGGGGCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCAGGAAGCTACCTGCATTTACATCTTTCTCGTCCTGGGGCTAC  700

seq1  TAAAGTTGTCTTTGAGCTTCGGTTTGAGTCGGATTTTAAATGCGTTTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTGTCTTTGAGCTTCGGTTTGAGTCGGATTTTAAATGCGTTTACT  750

seq1  GATGAGACTGGTTTCCTTGGTGTCATGCTACCCTGGGTCCTCTAAACAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGACTGGTTTCCTTGGTGTCATGCTACCCTGGGTCCTCTAAACAGG  800

seq1  ACCATTGGAAAGGTAACCCAACTACCACATCCAGTGACCCCATCCAACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGGAAAGGTAACCCAACTACCACATCCAGTGACCCCATCCAACAC  850

seq1  AGGGAACCTGATCATTTCCCCAATTTTGTAAGTGGCAGTAAAGGTTACCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAACCTGATCATTTCCCCAATTTTGTAAGTGGCAGTAAAGGTTACCT  900

seq1  CTCCTGAGACGGGAGTGACCAGGACAGTGGGGAGGAGAGGCCATTGCTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGAGACGGGAGTGACCAGGACAGTGGGGAGGAGAGGCCATTGCTGT  950

seq1  AAGGAGA-GGGGCTCAACTCGTGGCCTTGCCCATAAACCAGAAATGTCGT  999
      |||  || |||||||||||||||| |||| ||||||| ||||||||||||
seq2  AAGAGGAGGGGGCTCAACTCGTGGTCTTG-CCATAAATCAGAAATGTCGT  999

seq1  CTTCA-TTCCTAGCCTGGCTGTCAGCCAGAAATACAAAAAAGGTTTTTGG  1048
      ||||| ||||||||||||||||||||||||||||||||||||   ||| |
seq2  CTTCATTTCCTAGCCTGGCTGTCAGCCAGAAATACAAAAAAG---TTTTG  1046

seq1  GCTCTGATCCCTGTTTTGTCTC  1070
      |||||||| |||||||||||||
seq2  GCTCTGAT-CCTGTTTTGTCTC  1067

seq1: chr1_75755606_75756129
seq2: B6Ng01-242K14.g_69_592 (reverse)

seq1  GATGGAATAAGTCGTGTAGTAACAGCATCATTCTTTCTGATTAACATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAATAAGTCGTGTAGTAACAGCATCATTCTTTCTGATTAACATTTT  50

seq1  TTTAAAATTTGGGTTTACACAAATATCTCATTTAACATGTCTAGTGCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATTTGGGTTTACACAAATATCTCATTTAACATGTCTAGTGCTAT  100

seq1  TAAACACACTCACATGGTAGAGTGGCCATAAATGTTAATTTCTGGAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACACTCACATGGTAGAGTGGCCATAAATGTTAATTTCTGGAACTT  150

seq1  AAAAAAAAATCACTCCAAATATAAACTTTGTCCCTTTAATTAATTTAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAATCACTCCAAATATAAACTTTGTCCCTTTAATTAATTTAATG  200

seq1  CACTGACTCCCGAATATCCCTCCTTCTAGCCCCTATTAACCTTGATCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGACTCCCGAATATCCCTCCTTCTAGCCCCTATTAACCTTGATCCTA  250

seq1  TTTTTTACTTATATGGGTTTGCTTCTTTTATATACTCATGCATGTGAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTACTTATATGGGTTTGCTTCTTTTATATACTCATGCATGTGAAAT  300

seq1  CAAATAACATTGTCCCTTTGTGTCTGTCTTATTTCCCTTAGCATAATGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAACATTGTCCCTTTGTGTCTGTCTTATTTCCCTTAGCATAATGTC  350

seq1  CTCAACCCATGGTTAGCATATATCTGAATTTCATCCCTCTTTTAGACTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACCCATGGTTAGCATATATCTGAATTTCATCCCTCTTTTAGACTAA  400

seq1  TAAAATATTTCATAGAATGTATATATATATATATCATATTTTGTTTATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTTCATAGAATGTATATATATATATATCATATTTTGTTTATCC  450

seq1  ATTTATTTATGGAGGGGCATTTGGGTGGCTCCTACATTTTGGCTATTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATGGAGGGGCATTTGGGTGGCTCCTACATTTTGGCTATTGTT  500

seq1  GTACAAGATGTATAAATTGAATTC  524
      ||||||||||||||||||||||||
seq2  GTACAAGATGTATAAATTGAATTC  524