BAC Information

Click to search

BAC

Clone NameB6Ng01-243G09
Chromosome1 (Build37)
Map Location 49,284,233 - 49,285,181
singlet/doubletsinglet
Overlap geneLOC666924
Upstream geneLOC546734, LOC674566, LOC100041936, LOC666903, LOC666909, 2900045O20Rik
Downstream geneC230029F24Rik, LOC627430, LOC100041981, EG666962, EG666970
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243G09.bB6Ng01-243G09.g
ACCGA052791GA052792
length9811,203
definitionB6Ng01-243G09.b B6Ng01-243G09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaaccccccttaggctagaatagaaactctgtgttcacctacc
cttctatctcctataacataacacgagacctttttcatagtaagtccttg
tcctttcaaccaatacttttcattacttgttatatgttaggcatcatgct
agtcattggagctaaagcagttactgtaagattcaaacatccatattctc
gtgtcacatacatttttttttgtattgggcacaaataataaacaagtaag
tagaaacatgaaatataaagtagtaaatctattattaaatgcgtaaagca
aggtaaaaataatagaaagataagatcagtgtctatattagataatggaa
attccctcatttctcctgcaggaatttctattctatgtgacaaacaataa
taaccttggttaaaaatggtttacattctagctgttctccaggataatgc
tatttttttaattattaggttagatttctttatttgtatttcgaatgtta
tcccctttcctggtttcccctccaaaaaacccctatcccatccccgcttc
cactgctcatcaacccacgcactcccatttccctgccctggcattccact
accccgagcatctagcctttacaggaccaagggcctctcctcccattgat
gcccaacaagaccatcctctactacatatgcagctggaaccatgggttcc
tccttccatgtgttcaatttggttggtattttagtcctacggggctctgg
ggttggttctctggttggttcacattgttgttcatcctataagactacag
acctcttcagctccttggatcttttctctagtggggaccctgtgctaagt
acaatggttgactgagagcatccacatcagtatttgttaggcactggcac
atcctctcaggagatagctttatcaggctcctgtcagcaagcacttgttg
gcatccacataatttttgggtttggtgactg
gaattctttattttccttgaaatgaaaattctcaagtgatgtagacaaat
aaaaacacccaggatagctaaagaaattctgaacaataaacaaacaaaca
aataaaccaaaaaaaaaaaaaacctggaaaaacaaaataaaaacctgata
caagcatcaccattactgatttcaagttgtaataaatagctgaagtaata
aataccacaaggtattggcattaaaaagacacattggtcaatggaattga
actgaagatacaacatattcagatatttatttaccgcaagatccagctat
aacacttttggacacatactcaaaggatttttccatcctacaacatggac
acttgctcaactctgtttattgtgactttatgcataacagacagagactg
agtacaccctacttatctcacaaccagttgttggataaagaaactatgat
acatttacaaaatggagtattactcagtggttaaaaatgatgtcttttac
aacggagctaaaaccattcagtagaaaaaaagatagcattttcactaaat
ggtgctggtttgaatggcagtcagaatgtagaagaatgcaaatcgatcca
tccactcattgagtgggcttcaagttggaaaacttattggttggccactg
cagtaagttctatgcaacctttaccccagggcatcttggaagtaagacaa
attgtaggctttaggttttgtggcagggttatagctcagtaactttactg
gaagccttgtctaattatagaagatgtctggttcaagctttgcatgctgc
attgcaaagaatcttttgctagagtcaccctagtcgatttctaagtttct
tattgtgcttggtttctacctttcccccaattgtgcccctcattccattc
ttgtctcctagtactcgctcattccatccctctcccaagacctgtcgtgt
ctgtttctatcctcacctggtctcattccatctacaaaatcttattctac
ttttcccttcccacagagataatgcataccctaccctaggccctacctat
tatttactcagccctcttttgtgcttgcatatccatagcattagcctcaa
attttacagcttatgtccacgtattagtagttgtttagcatgtaggttcc
tgatctctgaattcctacctacgaagtgtttggtttgattttctccaggg
gta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_49284233_49285181
seq2: B6Ng01-243G09.b_44_992

seq1  GAATTCCTAACCCCCCTTAGGCTAGAATAGAAACTCTGTGTTCACCTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAACCCCCCTTAGGCTAGAATAGAAACTCTGTGTTCACCTACC  50

seq1  CTTCTATCTCCTATAACATAACACGAGACCTTTTTCATAGTAAGTCCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATCTCCTATAACATAACACGAGACCTTTTTCATAGTAAGTCCTTG  100

seq1  TCCTTTCAACCAATACTTTTCATTACTTGTTATATGTTAGGCATCATGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCAACCAATACTTTTCATTACTTGTTATATGTTAGGCATCATGCT  150

seq1  AGTCATTGGAGCTAAAGCAGTTACTGTAAGATTCAAACATCCATATTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTGGAGCTAAAGCAGTTACTGTAAGATTCAAACATCCATATTCTC  200

seq1  GTGTCACATACATTTTTTTTTGTATTGGGCACAAATAATAAACAAGTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCACATACATTTTTTTTTGTATTGGGCACAAATAATAAACAAGTAAG  250

seq1  TAGAAACATGAAATATAAAGTAGTAAATCTATTATTAAATGCGTAAAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACATGAAATATAAAGTAGTAAATCTATTATTAAATGCGTAAAGCA  300

seq1  AGGTAAAAATAATAGAAAGATAAGATCAGTGTCTATATTAGATAATGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAAATAATAGAAAGATAAGATCAGTGTCTATATTAGATAATGGAA  350

seq1  ATTCCCTCATTTCTCCTGCAGGAATTTCTATTCTATGTGACAAACAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTCATTTCTCCTGCAGGAATTTCTATTCTATGTGACAAACAATAA  400

seq1  TAACCTTGGTTAAAAATGGTTTACATTCTAGCTGTTCTCCAGGATAATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTGGTTAAAAATGGTTTACATTCTAGCTGTTCTCCAGGATAATGC  450

seq1  TATTTTTTTAATTATTAGGTTAGATTTCTTTATTTGTATTTCGAATGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTAATTATTAGGTTAGATTTCTTTATTTGTATTTCGAATGTTA  500

seq1  TCCCCTTTCCTGGTTTCCCCTCCAAAAAACCCCTATCCCATCCCCGCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTTCCTGGTTTCCCCTCCAAAAAACCCCTATCCCATCCCCGCTTC  550

seq1  CACTGCTCATCAACCCACGCACTCCCATTTCCCTGCCCTGGCATTCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTCATCAACCCACGCACTCCCATTTCCCTGCCCTGGCATTCCACT  600

seq1  ACCCCGAGCATCTAGCCTTTACAGGACCAAGGGCCTCTCCTCCCATTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCGAGCATCTAGCCTTTACAGGACCAAGGGCCTCTCCTCCCATTGAT  650

seq1  GCCCAACAAGACCATCCTCTACTACATATGCAGCTGGAACCATGGGTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAACAAGACCATCCTCTACTACATATGCAGCTGGAACCATGGGTTCC  700

seq1  TCCTTCCATGTGTTCAATTTGGTTGGTATTTTAGTCCTACGGGGCTCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCATGTGTTCAATTTGGTTGGTATTTTAGTCCTACGGGGCTCTGG  750

seq1  GGTTGGTTCTCTGGTTGGTTCACATTGTTGTTCATCCTATAAGACTACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTTCTCTGGTTGGTTCACATTGTTGTTCATCCTATAAGACTACAG  800

seq1  ACCTCTTCAGCTCCTTGGATCTTTTCTCTAGTGGGGACCCTGTGCTAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTCAGCTCCTTGGATCTTTTCTCTAGTGGGGACCCTGTGCTAAGT  850

seq1  ACAATGGTTGACTGAGAGCATCCACATCAGTATTTGTTAGGCACTGGCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGTTGACTGAGAGCATCCACATCAGTATTTGTTAGGCACTGGCAC  900

seq1  ATCCTCTCAGGAGATAGCTTTATCAGGCTCCTGTCAGCAAGCACTTGTT  949
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTCAGGAGATAGCTTTATCAGGCTCCTGTCAGCAAGCACTTGTT  949