BAC Information

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BAC

Clone NameB6Ng01-244I24
Chromosome1 (Build37)
Map Location 120,539,334 - 120,540,308
singlet/doubletsinglet
Overlap geneTcfcp2l1
Upstream geneB020011L13Rik, LOC100041684, LOC636972, EG666785, EG634762, LOC100042368, LOC637083, Tsn, Mki67ip, Clasp1
Downstream geneLOC100041753, Gli2, LOC666838, LOC100041778, Inhbb, Ralb, Tmem185b, Epb4.1l5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244I24.b
ACCGA053665
length977
definitionB6Ng01-244I24.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttggtatacattcctttgctcctgttgtcttgctgatgctgta
gggagtgcctctgcctggctcccctgtcacttgtgccttgagcttttcct
cacccggttgtaccacaaggtgtttcctattcttctgctgccctgaggca
gtcctggcagcagccccttctaagtgcccaggccatggttttcttcttca
ggagtacccacagataactgtcttgcctattctgactagagtatatacca
ggcttgataacctcattcatgacattcatagcagaaaggaggttaaggtc
ttcttagacataggtcatgaccttcagggaaaaggctcaggcccctggac
agaaaggctttgtccctgtagtgtgctgtctccctgactgagtgcactct
gtcacagtcacgggtacttgaatagtaccatacacgttgaggtgacgaga
caaattgcccgtgctgggcttcatggccactgcaccgtgctttcctcctc
tgctattcttctagtgcttttggcacgttgccctcctttctctggggtga
ggatggcctcttattatattttacgtggcattcattacctaaaccagcaa
ctgttggaaagtaaacaacctgtaaatcttggctggccctggcaattgcc
tcctgttcttgggaacacagtgatctgggcagaaggccgtgctctgggtt
ctgcccactgggcagaactactctggcttgtctgcccttcttgcaaaggc
acctggttgcctctgcccattggagatcagctgggataggctgctctggg
cagcactgtggacacaggagctgccttctggaagactggactgcctgaga
gagaatgtgctgtgtgcctatgtacaggggtacttgagtccaagtcccag
ggatgggtttctgctagattgcctcctggctaagtgaccttaagtactgg
gttacttggggttattggggtggtgtg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_120539334_120540308
seq2: B6Ng01-244I24.b_47_1023

seq1  GAATTCTTTGGTATACATTCCTTTGCTCCTGTTGTCTTGCTGATGCTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGTATACATTCCTTTGCTCCTGTTGTCTTGCTGATGCTGTA  50

seq1  GGGAGTGCCTCTGCCTGGCTCCCCTGTCACTTGTGCCTTGAGCTTTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGCCTCTGCCTGGCTCCCCTGTCACTTGTGCCTTGAGCTTTTCCT  100

seq1  CACCCGGTTGTACCACAAGGTGTTTCCTATTCTTCTGCTGCCCTGAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCGGTTGTACCACAAGGTGTTTCCTATTCTTCTGCTGCCCTGAGGCA  150

seq1  GTCCTGGCAGCAGCCCCTTCTAAGTGCCCAGGCCATGGTTTTCTTCTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGCAGCAGCCCCTTCTAAGTGCCCAGGCCATGGTTTTCTTCTTCA  200

seq1  GGAGTACCCACAGATAACTGTCTTGCCTATTCTGACTAGAGTATATACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTACCCACAGATAACTGTCTTGCCTATTCTGACTAGAGTATATACCA  250

seq1  GGCTTGATAACCTCATTCATGACATTCATAGCAGAAAGGAGGTTAAGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGATAACCTCATTCATGACATTCATAGCAGAAAGGAGGTTAAGGTC  300

seq1  TTCTTAGACATAGGTCATGACCTTCAGGGAAAAGGCTCAGGCCCCTGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGACATAGGTCATGACCTTCAGGGAAAAGGCTCAGGCCCCTGGAC  350

seq1  AGAAAGGCTTTGTCCCTGTAGTGTGCTGTCTCCCTGACTGAGTGCACTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGCTTTGTCCCTGTAGTGTGCTGTCTCCCTGACTGAGTGCACTCT  400

seq1  GTCACAGTCACGGGTACTTGAATAGTACCATACACGTTGAGGTGACGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGTCACGGGTACTTGAATAGTACCATACACGTTGAGGTGACGAGA  450

seq1  CAAATTGCCCGTGCTGGGCTTCATGGCCACTGCACCGTGCTTTCCTCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGCCCGTGCTGGGCTTCATGGCCACTGCACCGTGCTTTCCTCCTC  500

seq1  TGCTATTCTTCTAGTGCTTTTGGCACGTTGCCCTCCTTTCTCTGGGGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTCTTCTAGTGCTTTTGGCACGTTGCCCTCCTTTCTCTGGGGTGA  550

seq1  GGATGGCCTCTTATTATATTTTACGTGGCATTCATTACCTAAACCAGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCCTCTTATTATATTTTACGTGGCATTCATTACCTAAACCAGCAA  600

seq1  CTGTTGGAAAGTAAACAACCTGTAAATCTTGGCTGGCCCTGGCAATTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGGAAAGTAAACAACCTGTAAATCTTGGCTGGCCCTGGCAATTGCC  650

seq1  TCCTGTTCTTGGGAACACAGTGATCTGGGCAGAAGGCCGTGCTCTGGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTCTTGGGAACACAGTGATCTGGGCAGAAGGCCGTGCTCTGGGTT  700

seq1  CTGCCCACTGGGCAGAACTACTCTGGCTTGTCTGCCCTTCTTGCAAAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCACTGGGCAGAACTACTCTGGCTTGTCTGCCCTTCTTGCAAAGGC  750

seq1  ACCTGGTTGCCTCTGCCCATTGGAGATCAGCTGGGATAGGCTGCTCTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGTTGCCTCTGCCCATTGGAGATCAGCTGGGATAGGCTGCTCTGGG  800

seq1  CAGCACTGTGGACACAGGAGCTGCCTTCTGGAAGACTGGACTGCCTGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTGTGGACACAGGAGCTGCCTTCTGGAAGACTGGACTGCCTGAGA  850

seq1  GAGAATGTGCTGTGTGCCTATGTACAGGGGTACTTGAGTCCAAGTCCCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGTGCTGTGTGCCTATGTACAGGGGTACTTGAGTCCAAGTCCCAG  900

seq1  GGATGGGTTTCTGCTAGATTGCCTCCTGGCTAAGTGACCTTAAGTACTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGGTTTCTGCTAGATTGCCTCCTGGCTAAGTGACCTTAAGTACTGG  950

seq1  GTTACTTGGGG-TATT-GGGTGGTGTG  975
      ||||||||||| |||| ||||||||||
seq2  GTTACTTGGGGTTATTGGGGTGGTGTG  977