BAC Information

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BAC

Clone NameB6Ng01-244L12
Chromosome1 (Build37)
Map Location 150,322,321 - 150,322,909
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100042792, LOC435647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244L12.bB6Ng01-244L12.g
ACCGA053784GA053785
length1,198980
definitionB6Ng01-244L12.b B6Ng01-244L12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacataataaaagcaatctacagcaaacca
ctagccaacatcaaagtaaatggagagaagctggaagcaattccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccccaaaaattctaccagagaactcctaaacc
tgataaacagcgtcggtaaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaggatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggataacaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgccttacctaaagctttactacagagcaattgtgttaaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcacaattggtgctggg
cacaactgggtagttatcatgtaagaagaatgcgaatcgatccatactta
tctccttgtactaaggtcaaatctaagtggatcaaagaacttcactttaa
accagagaccactgaacttatagagggagaaatttgagaaagctggaaga
atatgggccacagggaaaaattcctgaacagacacgcaatgccttggcct
gtagactcgaaaattggacaatggaaccctaaatggaaacctctccca
gaattcttattagttaaatgcatttattttttcaaggcaaaaatatatta
gatatgtcaagtaatttttttactttcaaaggagagtaagtccagagaga
aaatcagtaataatgaatgatgattatcattttcagcaaataacccaata
aacatttcaaagagattatttaaaccttccttatctatttccataattaa
tgtttgaaaacacaacgtgtaaatatatatttcagaaagactgtgataaa
ttctacatagatgataaaaccttattgtcaaattaagaaaatctgtttat
gagtcagagttatcaatcttatactgaccaggaaatgttcttcctgctag
ttagttttcatactgctgaagaagaaaagagataattgcatcaaaccctg
aacgaaacaatactaaacttctggatacgatatacctacaggcaatactg
gcaagtctattcatggtgttgaccaattactctttggtttgaggattaga
gaaaacttgttcctggtaaggaaaacaataatgaacaaacaaagaaaaga
ctttaagaagggggatataagacttaggatggaatgtactgctgctgttt
tccaataaccatactgttatgatacctcttaattgtgcattgttctgttc
ataggtttgtactactcccatcttttcccagagaatcttcaaactgcatg
gggtagaagttaataccaaatggtgtaaatcctcaaattgctgtttcaaa
gcaaatgtgaatattcagatatatatgtgacatttatataaaccagttat
ccgtcttctccaaagcacagagggtaatatgggagatggggcagactagg
agaatgggaaattgctgtattctggacatggcatggataatgcacacata
tacctttagagtttatagtttaaatatacaagattgaacccagctaaaat
attcagcatggataggagctaagcaagcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_150322321_150322909
seq2: B6Ng01-244L12.g_65_653 (reverse)

seq1  GTACATTCCATCCTAAGTCTTATATCCCCCTTCTTAAAGTCTTTTCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTCCATCCTAAGTCTTATATCCCCCTTCTTAAAGTCTTTTCTTTG  50

seq1  TTTGTTCATTATTGTTTTCCTTACCAGGAACAAGTTTTCTCTAATCCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCATTATTGTTTTCCTTACCAGGAACAAGTTTTCTCTAATCCTCA  100

seq1  AACCAAAGAGTAATTGGTCAACACCATGAATAGACTTGCCAGTATTGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAGAGTAATTGGTCAACACCATGAATAGACTTGCCAGTATTGCCT  150

seq1  GTAGGTATATCGTATCCAGAAGTTTAGTATTGTTTCGTTCAGGGTTTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTATATCGTATCCAGAAGTTTAGTATTGTTTCGTTCAGGGTTTGAT  200

seq1  GCAATTATCTCTTTTCTTCTTCAGCAGTATGAAAACTAACTAGCAGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTATCTCTTTTCTTCTTCAGCAGTATGAAAACTAACTAGCAGGAAG  250

seq1  AACATTTCCTGGTCAGTATAAGATTGATAACTCTGACTCATAAACAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTCCTGGTCAGTATAAGATTGATAACTCTGACTCATAAACAGATT  300

seq1  TTCTTAATTTGACAATAAGGTTTTATCATCTATGTAGAATTTATCACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAATTTGACAATAAGGTTTTATCATCTATGTAGAATTTATCACAGT  350

seq1  CTTTCTGAAATATATATTTACACGTTGTGTTTTCAAACATTAATTATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGAAATATATATTTACACGTTGTGTTTTCAAACATTAATTATGGA  400

seq1  AATAGATAAGGAAGGTTTAAATAATCTCTTTGAAATGTTTATTGGGTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATAAGGAAGGTTTAAATAATCTCTTTGAAATGTTTATTGGGTTAT  450

seq1  TTGCTGAAAATGATAATCATCATTCATTATTACTGATTTTCTCTCTGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAAAATGATAATCATCATTCATTATTACTGATTTTCTCTCTGGAC  500

seq1  TTACTCTCCTTTGAAAGTAAAAAAATTACTTGACATATCTAATATATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTCCTTTGAAAGTAAAAAAATTACTTGACATATCTAATATATTTT  550

seq1  TGCCTTGAAAAAATAAATGCATTTAACTAATAAGAATTC  589
      |||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGAAAAAATAAATGCATTTAACTAATAAGAATTC  589