BAC Information

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BAC

Clone NameB6Ng01-244M08
Chromosome1 (Build37)
Map Location 144,883,245 - 144,884,385
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639376
Downstream geneLOC545369, Cdc73, B3galt2, LOC623138, Glrx2, Trove2, Uchl5, Rgs2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244M08.bB6Ng01-244M08.g
ACCGA053824GA053825
length1,1351,179
definitionB6Ng01-244M08.b B6Ng01-244M08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaaccttttattgtaaagtatgcttttctctctctctcatttt
ctccatttaatttgtgctttcatagttttgctatccccttttcccctata
cttttgatgatgtatttataaaggaaatcatttactaaatggttctattt
taattatttattcttttgagtttttttaaattcttttttacagtccagat
ttatccccttcccagcccaccctcagactgttccacatcctacacctcct
ttcccccatctccataggatgtccataccacctcatacacactccaccag
acctcccactccctgtgaccccaagtctctcaagggttaggtgcatctta
tctgactgaatctagacttggcagtcctctgctgtatatatgtttatagt
tttatgttgagtttgagtctagagaagcttatggtacagtttcttggtga
cttcagtctttgatcaatatcagaagtattttcaagtacctctctagtca
aagttggggcaattcatgaagtaaatttatgagcaaccatagataacatc
aagaattgtggcaatggaagccaccatcattttttccatggctctcaaaa
tggctgtgcaatatttctgggggtttgtcaccagctcccacatttgtaga
ggcacaacatagtgctgggcttgctgctggatgaatgcaagtgatctggg
ttcagctatactggcaatcatagacttgaggtttaaaatcacaaaggagg
tgctattaatccactcatttctataccaaagtagttgatgaggcaactta
aaaaaattaattttggtttccagctaaaaaggaattccaacatgctgaaa
ggagcctgaattagctggacacattccacttccagtcaggaggaagatac
tgataaatgcttgtgctaagccacatttctatttttaatgcagttcagga
ctcaagttaaggtagttgtgccttagatagtgggtggagatcttttaccc
aattaacccaatatggattatgcttacagataactcatagggtacgtagt
tagataatattccttaggcaatgtacaattctggctcccttgataatcac
cagatcctatcagaagacaataatgttttactgtc
gaattctcacctggggaatactgaatggctgagaagcatctgaaaaagtg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
ttcacctcataccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcagacttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgttccaacaggtaagaagaacacatgctccactat
gttcatagcagccttatctataatagccagaaactggaaagaaaccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatgtacacaatg
gagtactagtcagctattaaaaagaatgaatttatgaaattcctaggcaa
acggatggacttgaagggcatcatcttgagtgaggtaacccaatcacaaa
agaactcacacaatatgtactcactgatacgtgtatattagcccagaaac
ttagaatacccaagatataagatgcaatgtccaaaacacgtgaaactcaa
gaagaatgaagaccaaagtttggacactttgccccttcttagaattggga
acaaaacacccatgaaaggagttacaaagacaaagtttggagctgagagg
aaaggatggaccatctagagactgccatatcccgggatccatcccataat
cagcttccaaaggctcacaccattgcatacactagcaagattttgatgaa
aggacacagatatagctgtctcttgagactatgctggggcctagcaaaca
caggaagtggatgctcacagtcagctattgggatggatcacagggccccc
aatggaggagctagagaaagtaccaaggatctgaagggattctgcaatcc
tatcggtggaacaacatatgactaacactatatgccccccccctttttcg
gagctcgtctctctagctgcatatgaatcagagattgctcaagtcaagaa
catcagttggtaagagaagtcattgttctggccaaccttatatggcctcc
agttacgaggataccacccttgaggtcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_144883245_144884385
seq2: B6Ng01-244M08.b_45_1179 (reverse)

seq1  GACAGTAAACATTTATTGTCTTCTTGATAGGATCT-GTGATAACCAGGGA  49
      |||||||||   ||||||||||| ||||||||||| ||||| | || || 
seq2  GACAGTAAAACATTATTGTCTTC-TGATAGGATCTGGTGATTATCAAGGG  49

seq1  AGCAAGAATTTGTACA-TGCCT-AGGAATAATTATCTAAACTACGTACCC  97
      ||| |||| ||||||| ||||| |||||| ||||||| ||||||||||||
seq2  AGCCAGAA-TTGTACATTGCCTAAGGAAT-ATTATCT-AACTACGTACCC  96

seq1  TATGAGTTTATCTGTAAGGCATTATTCATATTGGGTTAATTGGGGTAAAA  147
      |||||| |||||||||| |||| || ||||||||||||||||||   |||
seq2  TATGAG-TTATCTGTAA-GCATAATCCATATTGGGTTAATTGGG--TAAA  142

seq1  AGATCCTCACCCACTATCTAAGGCACAACTACTTTAACTTGAGTCCTGAA  197
      |||||  ||||||||||||||||||||||||| |||||||||||||||||
seq2  AGATCTCCACCCACTATCTAAGGCACAACTACCTTAACTTGAGTCCTGAA  192

seq1  CTGCATTAAAAATAAGAAATGTGGCTTAGCACAAGCATTTATCAGTATCT  247
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTGCATTAAAAAT-AGAAATGTGGCTTAGCACAAGCATTTATCAGTATCT  241

seq1  TCCTCCTGACTGGAAGTGGAATGTGTCCAGCTAATTCAGGCTCCTTTCAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTGACTGGAAGTGGAATGTGTCCAGCTAATTCAGGCTCCTTTCAG  291

seq1  CATGTTGGAATTCCTTTTTAGCTGGAAACCAAAATTAATTTTTTTAAGTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGGAATTCCTTTTTAGCTGGAAACCAAAATTAATTTTTTTAAGTT  341

seq1  GCCTCATCAACTACTTTGGTATAGAAATGAGTGGATTAATAGCACCTCCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCATCAACTACTTTGGTATAGAAATGAGTGGATTAATAGCACCTCCT  391

seq1  TTGTGATTTTAAACCTCAAGTCTATGATTGCCAGTATAGCTGAACCCAGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATTTTAAACCTCAAGTCTATGATTGCCAGTATAGCTGAACCCAGA  441

seq1  TCACTTGCATTCATCCAGCAGCAAGCCCAGCACTATGTTGTGCCTCTACA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGCATTCATCCAGCAGCAAGCCCAGCACTATGTTGTGCCTCTACA  491

seq1  AATGTGGGAGCTGGTGACAAACCCCCAGAAATATTGCACAGCCATTTTGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGGAGCTGGTGACAAACCCCCAGAAATATTGCACAGCCATTTTGA  541

seq1  GAGCCATGGAAAAAATGATGGTGGCTTCCATTGCCACAATTCTTGATGTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATGGAAAAAATGATGGTGGCTTCCATTGCCACAATTCTTGATGTT  591

seq1  ATCTATGGTTGCTCATAAATTTACTTCATGAATTGCCCCAACTTTGACTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGGTTGCTCATAAATTTACTTCATGAATTGCCCCAACTTTGACTA  641

seq1  GAGAGGTACTTGAAAATACTTCTGATATTGATCAAAGACTGAAGTCACCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGTACTTGAAAATACTTCTGATATTGATCAAAGACTGAAGTCACCA  691

seq1  AGAAACTGTACCATAAGCTTCTCTAGACTCAAACTCAACATAAAACTATA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTGTACCATAAGCTTCTCTAGACTCAAACTCAACATAAAACTATA  741

seq1  AACATATATACAGCAGAGGACTGCCAAGTCTAGATTCAGTCAGATAAGAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATATACAGCAGAGGACTGCCAAGTCTAGATTCAGTCAGATAAGAT  791

seq1  GCACCTAACCCTTGAGAGACTTGGGGTCACAGGGAGTGGGAGGTCTGGTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTAACCCTTGAGAGACTTGGGGTCACAGGGAGTGGGAGGTCTGGTG  841

seq1  GAGTGTGTATGAGGTGGTATGGACATCCTATGGAGATGGGGGAAAGGAGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGTATGAGGTGGTATGGACATCCTATGGAGATGGGGGAAAGGAGG  891

seq1  TGTAGGATGTGGAACAGTCTGAGGGTGGGCTGGGAAGGGGATAAATCTGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGATGTGGAACAGTCTGAGGGTGGGCTGGGAAGGGGATAAATCTGG  941

seq1  ACTGTAAAAAAGAATTTAAAAAAACTCAAAAGAATAAATAATTAAAATAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAAAAAGAATTTAAAAAAACTCAAAAGAATAAATAATTAAAATAG  991

seq1  AACCATTTAGTAAATGATTTCCTTTATAAATACATCATCAAAAGTATAGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTTAGTAAATGATTTCCTTTATAAATACATCATCAAAAGTATAGG  1041

seq1  GGAAAAGGGGATAGCAAAACTATGAAAGCACAAATTAAATGGAGAAAATG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGGGGATAGCAAAACTATGAAAGCACAAATTAAATGGAGAAAATG  1091

seq1  AGAGAGAGAGAAAAGCATACTTTACAATAAAAGGTTCTGAATTC  1141
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAAAAGCATACTTTACAATAAAAGGTTCTGAATTC  1135