BAC Information

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BAC

Clone NameB6Ng01-244P14
Chromosome1 (Build37)
Map Location 111,353,709 - 111,354,064
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626474
Downstream geneEG666508, Cdh7
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244P14.bB6Ng01-244P14.g
ACCGA053979GA053980
length985501
definitionB6Ng01-244P14.b B6Ng01-244P14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttttaatggctgagttgtattccatcgtgtaaatgtgtc
acattttctgtatccattcctctgttgaggaacagctgagttcactccag
cttctgactattataaataaggctgatatgaacgtagtggagcatgtgtc
cttaatacatgttggagcatcttctgatatatatgcccaggaatggtata
gctgggtcctcaggtagtactatgtccaattttctgaggaaccactaaaa
tgatttccagagtggttggtggaggagtgttcctctttctccacatcctc
accagcatctgctgttacctgagtttttgatcttagccattctgactggt
gtgaggtgaaatctcacggttgttttgatttgcatttccctgaatattaa
gaatgttgaacatttgtttaggtgcttcttagccacttgttagtcctctg
ctgagaattctttgtttagttctataccccattttaaaatagggttattt
ggttctctgaagactaacttcttgaatttctttgtatatattggatatta
gccctctatcagatgtagggttggtaaatatcttttcccaatctgttggt
tgatattttgtcctattatcagtgtcctttgccttcagaagtcctgcaat
tttatgaggtcccatttgtttttcaattcttgatcttagagcacaagcta
ttgctgttctgttttggaaatttttgccctgtgccgatgagctttaaggc
tcttcccaactttcttttcttagtttccgtgtatctggttttatgtgaag
gtcctttgattcacttggacttgaacattctacaaggagacaagaatggg
tccgatttgcatttcttctacatgctatgccagttgaaacaagcactata
ttttgaaaatgtctcttttcccactggatggctttagcctctttgtcaaa
gatcaagtgatcattggtgtgtggggttcattgct

ttttacttgcagacatccatccagttagagcagcaccatttagctttggt
ttctttgtcaaaaatcttctattttattaatcaacctgtctgtctctggt
ccaataccatgtgatttttatcaccattgctctgtagtacagcttgaagt
tagggatagttattcttccagaagttcttttatttttcagaattgtcttg
gcttttttcttcaaccaaagtatggatacagcaaatgtagttcatttcca
caacagaatactattcagctatgaaaaacaaggacactgtaaattttgca
gggaagtgaatggaactagaaaataccaccctgagttagatagactagat
ccaaaaggacatgcattttatatattcactgataagtggatattagtcaa
aaagtatagaaaaaccataatacagcacagactcaaagaaattaaataaa
aagtgtccaagtgatgatgtttaaattccacttagaagggggaacaaaat
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_111353709_111354064
seq2: B6Ng01-244P14.g_116_571

seq1  TTGGTTTCTTTGTCAAAA----TCAA--ATATCAAAAAATATTTGCACAT  44
      ||||||||||||||||||    || |   ||| ||  ||  | |     |
seq2  TTGGTTTCTTTGTCAAAAATCTTCTATTTTATTAATCAACCTGTCTGTCT  50

seq1  CTATATAAATACCTTGT--TTTATATCTACCTATCAATTCTGGATAGCAA  92
      ||     |||||| |||  ||| ||||  | |  |   |||| |   || 
seq2  CTGGTCCAATACCATGTGATTTTTATCACCATTGC---TCTGTAGTACAG  97

seq1  CTGAATGTT-----TAGTTTCTC---------------TATTTTTTAACA  122
      ||  | |||     |||||  ||               ||||||| |  |
seq2  CTTGAAGTTAGGGATAGTTATTCTTCCAGAAGTTCTTTTATTTTTCAGAA  147

seq1  TT-AATTAGCAGTTGT-----AACAAA----GGTGAAAGAAAA-------  155
      ||   || ||  || |     | ||||    ||  | || |||       
seq2  TTGTCTTGGCTTTTTTCTTCAACCAAAGTATGGATACAGCAAATGTAGTT  197

seq1  ------CAC---------TTATT------GTAAAAACAAAG-----GTAA  179
            |||          ||||        |||||||| |     ||||
seq2  CATTTCCACAACAGAATACTATTCAGCTATGAAAAACAAGGACACTGTAA  247

seq1  A----------ATGTCTCTTTAACCATA-------ACCC--AGTCA----  206
      |          | ||   |  ||| | |       ||||  ||| |    
seq2  ATTTTGCAGGGAAGTGAATGGAACTAGAAAATACCACCCTGAGTTAGATA  297

seq1  ---------CAAAATAACACACATTGTATGATCTCACTGATAAGTGGATA  247
               |||||  |||  |||| |||    |||||||||||||||||
seq2  GACTAGATCCAAAAGGACATGCATTTTATATATTCACTGATAAGTGGATA  347

seq1  TTAGCTCAAAAGT-TTGAATACCCAAGATACAAATCAGACCACATGCGGC  296
      ||||   |||||| | ||| | |||  |||||   |||||   | |    
seq2  TTAGTCAAAAAGTATAGAAAAACCATAATACAGCACAGACTCAAAGAAAT  397

seq1  TCAAGAAGAAGGAAGAGCAAAGTGTGGATGTTTCAGTCTTTCTTAGAAGG  346
      | || || |||      | |||||  ||||||| | |    |||||||||
seq2  TAAATAAAAAG---TGTCCAAGTGATGATGTTTAAATTCCACTTAGAAGG  444

seq1  GGGA--AAAATA  356
      ||||  ||||||
seq2  GGGAACAAAATA  456


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