BAC Information

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BAC

Clone NameB6Ng01-245B02
Chromosome1 (Build37)
Map Location 11,346,377 - 11,347,555
singlet/doubletsinglet
Overlap genenone
Upstream geneCpa6, LOC433271, C030045D06Rik
Downstream geneA830018L16Rik, LOC665262
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245B02.bB6Ng01-245B02.g
ACCGA054048GA054049
length1,173441
definitionB6Ng01-245B02.b B6Ng01-245B02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataacaaatgcactagtgaaaatttcaaagttgcattttctata
ccataattctaacatcatagaataggaaaaatatagctgaccaatgagaa
cagaggctggctggtatacacaaattcttggcacattgtacaccacatat
atactgaaggagactggcgggtgactaagggttgccatttgaaccacgga
caaattgtaaatttcagatggaagtgaggacagattttattaggggaata
aattatttgatgaaagcacttgggagaacttttagaaatagtatccacaa
ctgcctgacttagttgctaaactagagtaaacactgttctgacccatgac
agtgaagaagagggaaaggcagagacatcatctactcgtaaagaactaaa
tagaggactctgcctttcttctcccttctttacccagtactattcactgg
gccacatgttggcttccgtcagaaactggaaaaaatacatgtgatgattt
acacgtataattcaagcaccaggaggcagagacatggtgtgtttgaggct
aacctgggaagtagaataacaccctatgtccaataacataaaacaatcca
gctcactaaagtaagaaaagcagcaccatagcaacaaaataggaaaaatg
aaaggagatacttaaccacagactttaaaaccaaccagaagagccatcat
tcttcctgttctaggggtagatgaaacacgcagtctaaggctcagtttga
tacatgtttgaagaatgtctaccatgagtatgttatctgataccattctg
agggacacagaattatcttcaagtttacctgtgattgccctttgaatact
acaaatgattctatttagtgaggagataaatggatgcctgtatagagtga
aacacaaatgtgatttttgaatccttctcttaaattagcaaactggctct
cagtttgacccatacattacaaaaacacttgctcctagggaaccaacttc
tctggaaggaaatagttattgaaagagctataagcaatggttgggattct
ttcctcatagttttaaaaagagactatcttagatctcaatagacagttgc
taagagaaaattggatttaggttcttgggccatggaagcttcagagctca
ttctccatagcctgtgtaaccag

tcttgatttcttaagtgtcttttgttatgctcccccttttcccagtttag
tttctgattttgttaacttggacattctctgtccaacgtttcactaaata
atacagtagctacaattgtatcttcattaggtacatctgattgggataaa
ttttcatccttttaccctaaagtgaagtttacccttgacactgaagtttc
ttggatgcagtacaaggatgtatcacatctattttcatatctactctgtt
agtctgtatccttttattggggaattgaattgttgatattgagagatatc
aatgaccaatgattattgatttctactttgttgttgtcgttgttgttgga
ggtggtggtggtggtggtggtggcggcggtggtggtggtggtgagtgtgt
aagcatgattttttttgaggcatgtgcatgctatgcttctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_11346377_11347555
seq2: B6Ng01-245B02.b_44_1216

seq1  GAATTCATAACAAATGCACTAGTGAAAATTTCAAAGTTGCATTTTCTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAACAAATGCACTAGTGAAAATTTCAAAGTTGCATTTTCTATA  50

seq1  CCATAATTCTAACATCATAGAATAGGAAAAATATAGCTGACCAATGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAATTCTAACATCATAGAATAGGAAAAATATAGCTGACCAATGAGAA  100

seq1  CAGAGGCTGGCTGGTATACACAAATTCTTGGCACATTGTACACCACATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCTGGCTGGTATACACAAATTCTTGGCACATTGTACACCACATAT  150

seq1  ATACTGAAGGAGACTGGCGGGTGACTAAGGGTTGCCATTTGAACCACGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGAAGGAGACTGGCGGGTGACTAAGGGTTGCCATTTGAACCACGGA  200

seq1  CAAATTGTAAATTTCAGATGGAAGTGAGGACAGATTTTATTAGGGGAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGTAAATTTCAGATGGAAGTGAGGACAGATTTTATTAGGGGAATA  250

seq1  AATTATTTGATGAAAGCACTTGGGAGAACTTTTAGAAATAGTATCCACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTGATGAAAGCACTTGGGAGAACTTTTAGAAATAGTATCCACAA  300

seq1  CTGCCTGACTTAGTTGCTAAACTAGAGTAAACACTGTTCTGACCCATGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGACTTAGTTGCTAAACTAGAGTAAACACTGTTCTGACCCATGAC  350

seq1  AGTGAAGAAGAGGGAAAGGCAGAGACATCATCTACTCGTAAAGAACTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGAAGAGGGAAAGGCAGAGACATCATCTACTCGTAAAGAACTAAA  400

seq1  TAGAGGACTCTGCCTTTCTTCTCCCTTCTTTACCCAGTACTATTCACTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGACTCTGCCTTTCTTCTCCCTTCTTTACCCAGTACTATTCACTGG  450

seq1  GCCACATGTTGGCTTCCGTCAGAAACTGGAAAAAATACATGTGATGATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACATGTTGGCTTCCGTCAGAAACTGGAAAAAATACATGTGATGATTT  500

seq1  ACACGTATAATTCAAGCACCAGGAGGCAGAGACATGGTGTGTTTGAGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGTATAATTCAAGCACCAGGAGGCAGAGACATGGTGTGTTTGAGGCT  550

seq1  AACCTGGGAAGTAGAATAACACCCTATGTCCAATAACATAAAACAATCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGGAAGTAGAATAACACCCTATGTCCAATAACATAAAACAATCCA  600

seq1  GCTCACTAAAGTAAGAAAAGCAGCACCATAGCAACAAAATAGGAAAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTAAAGTAAGAAAAGCAGCACCATAGCAACAAAATAGGAAAAATG  650

seq1  AAAGGAGATACTTAACCACAGACTTTAAAACCAACCAGAAGAGCCATCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGATACTTAACCACAGACTTTAAAACCAACCAGAAGAGCCATCAT  700

seq1  TCTTCCTGTTCTAGGGGTAGATGAAACACGCAGTCTAAGGCTCAGTTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGTTCTAGGGGTAGATGAAACACGCAGTCTAAGGCTCAGTTTGA  750

seq1  TACATGTTTGAAGAATGTCTACCATGAGTATGTTATCTGATACCATTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTTTGAAGAATGTCTACCATGAGTATGTTATCTGATACCATTCTG  800

seq1  AGGGACACAGAATTATCTTCAAGTTTACCTGTGATTGCCCTTTGAATACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACACAGAATTATCTTCAAGTTTACCTGTGATTGCCCTTTGAATACT  850

seq1  ACAAATGATTCTATTTAGTGAGGAGATAAATGGATGCCTGTATAGAGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGATTCTATTTAGTGAGGAGATAAATGGATGCCTGTATAGAGTGA  900

seq1  AACACAAATGTGATTTTTGAATCCTTCTCTTAAATTAGCAAACTGGCTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAATGTGATTTTTGAATCCTTCTCTTAAATTAGCAAACTGGCTCT  950

seq1  CAGTTTGACCCAATACATTACAAAAACACTTGCTCCTAGGGAACCAACTT  1000
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGACCC-ATACATTACAAAAACACTTGCTCCTAGGGAACCAACTT  999

seq1  CTCTGGAAGGAAATAGTTATTGAAAGGAGCTTAATAAAGCAATGGTT-GG  1049
      ||||||||||||||||||||||||| |||||  || ||||||||||| ||
seq2  CTCTGGAAGGAAATAGTTATTGAAA-GAGCT--AT-AAGCAATGGTTGGG  1045

seq1  ATTCTTTCCCTCATTAGTTTTTAAAAGAGACTAATCTTAAGATCTCCATA  1099
      ||||||| ||||| ||||||| |||||||||| ||||| ||||||| |||
seq2  ATTCTTT-CCTCA-TAGTTTTAAAAAGAGACT-ATCTT-AGATCTCAATA  1091

seq1  GACCAGTTTGCTAAGAGGAAAAATGGGTTTA-GTTCTT-GGCAATGGAAA  1147
      || ||| ||||||||| ||||| ||| |||| |||||| ||| |||||| 
seq2  GA-CAG-TTGCTAAGA-GAAAATTGGATTTAGGTTCTTGGGCCATGGAAG  1138

seq1  CCTCAGAGCTCA-TCTCCATAG-CTGTGT-ACCAG  1179
      | |||||||||| ||||||||| |||||| |||||
seq2  CTTCAGAGCTCATTCTCCATAGCCTGTGTAACCAG  1173


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