BAC Information

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BAC

Clone NameB6Ng01-245B04
Chromosome1 (Build37)
Map Location 47,853,343 - 47,854,363
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc39a10, EG227061, LOC666869
Downstream geneLOC546734, LOC674566, LOC100041936, LOC666903
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245B04.bB6Ng01-245B04.g
ACCGA054052GA054053
length1,0251,006
definitionB6Ng01-245B04.b B6Ng01-245B04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctatgctgtaatatcagcaatatgtaattctatctaattttat
aaaacaaatatttatattcttattcaaacattagattaacatcagcttaa
ctaattttaatttgctcttaagcaaattaaaaagtattacaatagttata
aatctaatgcagtatggaattacaattatttcaattccaagagaaattct
agtaaataatgtttttatggcagtttgtctattgctaaaactcataatac
taaaacaaaatgtggaacatcacacccacagacacacccacatgcacaca
cacacacacacacacacacacacacacagagggaaggcaagtcctcatta
caacctgaagtcagattgactaaaactttttaaattgaatcagaacaata
caatgatagtttttatagcgaaatctgaatttatcatagaaaaaagggta
tgcttaatgtagggatactatacatttcaaggtatctctgagtcttccct
tgctctgtttctgtctacactccaagggcacactggtatcatatgtattt
gaaagtatagtagctgggtttggggtatcatacccttgttttgattgtct
agcagaggaatgggaaaattaagctaataacagaaacacagaagactgat
gtataggctatcaaatatcctactttatacacacatacacacacacacac
acacacacacatacacacattattccttctggaagatttaccccgaggaa
atttatacaaaccagggcaaagtagtacataaaaagtagacatttatgta
aataaattaaattttcttaatgaaatttgcaataagtagatattatagaa
caaagaaaaagaggttgacttatgctgacaacatctaattcataggttct
tgtaataaacatgcaagaaaaagtcctgaatacatatacagcttccacag
atacacatattgacatacatcaggcagaaaaaagtagcatatatggtttt
attttcctttacttgaaaataataa
gaattctcacctgaggaataccgaatggctgagaaacacctgaaaaaatg
ttcagcatcattaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggcgaagatcaaaaattcaggtgacagc
agatgctgacaaggatgtggagaaaaatgaacaatcctccattgttggtg
ggattgcaaacttgtacaattactctggatatcagtctggcagttcctca
ggaaattgtacatagtactactggaagattcagcaattcctctcctgggc
atatactatgaagatgttccaactggtaataaggacacatgctccactat
gttcatagcagccttattcataatagccagaagctggaaagaacacagat
gcccctcaacagaggaatggatacagaaaatgtgatacatttacacaatg
gagtactactcagctattaaaaaaaaaggaattcatgaaattttaggcga
atggaggatatcatccttagtgaggtaatccaatcccaaaagaacacaca
tcatatgcagtcactgataagtgggcactactcagaaacttagaatatcc
aagatacaatttacaaaacacagtaaactcaagaagaaagaagaccaaag
tgtggatactttgctccttcttagaatgggaaacaaaaacccaaggaagg
agttacaaagttcatagctgaggtggaaggaaagaccatccagagactgc
cccacatgggtctccatcccatacgcaaccatcaaaccacccaaaccacc
aaacactactgcatatgccagaaagattttgctgacaggaattctgacgt
actctctcttgtgagtctatgccaatgcctggcaaatgcagaagtggatg
gtcacagtatcaattgggatgggaacacaaggtccactatgaagggagct
agcataagttactctagggagctaaaggggtttgcaacgactataggagg
aacacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_47853343_47854363
seq2: B6Ng01-245B04.b_42_1066 (reverse)

seq1  TTATTATATTTCAAGT-AAGGAAA--TAAACCATATATGCTAC-TTTTTC  46
      ||||||| |||||||| |||||||   |||||||||||||||| ||||||
seq2  TTATTAT-TTTCAAGTAAAGGAAAATAAAACCATATATGCTACTTTTTTC  49

seq1  TGCCTGATGTATGTCAATATGTGTATCTGTGGAAGCTGTATATGTATTCA  96
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGATGTATGTCAATATGTGTATCTGTGGAAGCTGTATATGTATTCA  99

seq1  GGAC-TTTTCTTGCATGTTTATTACAAGAACCTATGAATTAGATGTTGTC  145
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTTTCTTGCATGTTTATTACAAGAACCTATGAATTAGATGTTGTC  149

seq1  AGCATAAGTCAACCTCTTTTTCTTTGTTCTATAATATCTACTTATTGCAA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAGTCAACCTCTTTTTCTTTGTTCTATAATATCTACTTATTGCAA  199

seq1  ATTTCATTAAGAAAATTTAATTTATTTACATAAATGTCTACTTTTTATGT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTAAGAAAATTTAATTTATTTACATAAATGTCTACTTTTTATGT  249

seq1  ACTACTTTGCCCTGGTTTGTATAAATTTCCTCGGGGTAAATCTTCCAGAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTTGCCCTGGTTTGTATAAATTTCCTCGGGGTAAATCTTCCAGAA  299

seq1  GGAATAATGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAATGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTAT  349

seq1  AAAGTAGGATATTTGATAGCCTATACATCAGTCTTCTGTGTTTCTGTTAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGGATATTTGATAGCCTATACATCAGTCTTCTGTGTTTCTGTTAT  399

seq1  TAGCTTAATTTTCCCATTCCTCTGCTAGACAATCAAAACAAGGGTATGAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTAATTTTCCCATTCCTCTGCTAGACAATCAAAACAAGGGTATGAT  449

seq1  ACCCCAAACCCAGCTACTATACTTTCAAATACATATGATACCAGTGTGCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAAACCCAGCTACTATACTTTCAAATACATATGATACCAGTGTGCC  499

seq1  CTTGGAGTGTAGACAGAAACAGAGCAAGGGAAGACTCAGAGATACCTTGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGTGTAGACAGAAACAGAGCAAGGGAAGACTCAGAGATACCTTGA  549

seq1  AATGTATAGTATCCCTACATTAAGCATACCCTTTTTTCTATGATAAATTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATAGTATCCCTACATTAAGCATACCCTTTTTTCTATGATAAATTC  599

seq1  AGATTTCGCTATAAAAACTATCATTGTATTGTTCTGATTCAATTTAAAAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCGCTATAAAAACTATCATTGTATTGTTCTGATTCAATTTAAAAA  649

seq1  GTTTTAGTCAATCTGACTTCAGGTTGTAATGAGGACTTGCCTTCCCTCTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGTCAATCTGACTTCAGGTTGTAATGAGGACTTGCCTTCCCTCTG  699

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGTGGGTGTGTCTGTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGTGGGTGTGTCTGTG  749

seq1  GGTGTGATGTTCCACATTTTGTTTTAGTATTATGAGTTTTAGCAATAGAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGATGTTCCACATTTTGTTTTAGTATTATGAGTTTTAGCAATAGAC  799

seq1  AAACTGCCATAAAAACATTATTTACTAGAATTTCTCTTGGAATTGAAATA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCCATAAAAACATTATTTACTAGAATTTCTCTTGGAATTGAAATA  849

seq1  ATTGTAATTCCATACTGCATTAGATTTATAACTATTGTAATACTTTTTAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAATTCCATACTGCATTAGATTTATAACTATTGTAATACTTTTTAA  899

seq1  TTTGCTTAAGAGCAAATTAAAATTAGTTAAGCTGATGTTAATCTAATGTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTAAGAGCAAATTAAAATTAGTTAAGCTGATGTTAATCTAATGTT  949

seq1  TGAATAAGAATATAAATATTTGTTTTATAAAATTAGATAGAATTACATAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAGAATATAAATATTTGTTTTATAAAATTAGATAGAATTACATAT  999

seq1  TGCTGATATTACAGCATAGAGAATTC  1021
      ||||||||||||||||||||||||||
seq2  TGCTGATATTACAGCATAGAGAATTC  1025