BAC Information

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BAC

Clone NameB6Ng01-245C06
Chromosome1 (Build37)
Map Location 185,925,750 - 186,111,812
singlet/doubletdoublet
Overlap genenone
Upstream geneEG666649, 1700056E22Rik, Dusp10
Downstream geneEG433387, EG629032, LOC666714, Hlx1, Mosc1, Mosc2, LOC100039079, C130074G19Rik, Mark1, Iars2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245C06.bB6Ng01-245C06.g
ACCGA054102GA054103
length9911,155
definitionB6Ng01-245C06.b B6Ng01-245C06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(186,110,830 - 186,111,812)(185,925,750 - 185,926,902)
sequence
gaattcaaaataagcagaaagtaacaaccataccagaagatcagtactca
gagccccagggactgtaaaatggtgtagccactgtgaacagaccacagat
cttcccaaaggaaccacacagatagttttatgcagtactttgtaaagatg
atacattgtgggttacaataatcatctttaaagaagcaattggacaaaga
aaatgaagatgtaatttaaaaaaaaatgtagatgataaagctggccttat
tgtaaacctgcgtgagatttcagatcatgaaggttgaagtcagacacctg
gtcacatttctaaaacctggtttcctcattagttcattagtaaaatctga
tgagtagttatactgtcctaacaacgctttgtgtcagcgagtcaaagcca
cttctcttttcccactgaccagtataaaagcagcctggtacacagtgctt
tgtggagtttgctcagggccctaggtattgtagggtagggtggctcccac
tgtagagatgggttctatgacagccgtagctcagtaatattgtaggtctg
tgtttagtgtggagtgggtggggacaggagggttccacaatgattttctg
cattaattttcatattcccatcagcagggtgtaaggctctttcttcttca
ctaaccccaacccccctctctctcacacacaccctttgagacgatctcac
tatggtcctgactgggcctagtatctacagagatctacttgcctctgctt
tccaagtgctggggataaaggcatgcacctttgtaccctgcgtgttgtat
gttttcttaatggtttctattatgattaggtcagaatacaacttctggaa
cttggtttctgcccttctgtgggctttagagatcacacttgagtttgtta
cgttatatctcacaggcttcttcatctagatttgatttgaattcctctga
tggcttaagatggtccactttttatatgttctaggaagcat

gaattcttggtccccagcgagtagcactattttgagggttgtgggaactt
tagaccatgagacccagttgaaataagtaggtctctgggccacctgcttc
ccactcagtggtgaagggagctgtcatgatgtcttcacacagggcacgga
tataaatgactggttgaaacctttaccagctacaatttgaaagaattcct
ttcttctttccagtggtctatgtcaggtatttctgtgacagcagtacgat
agtcaccaatgtggcaatcattcctaagagttaaatctcaagtttagaga
tagtgggttgaagaagagtcagatgaattttatctactatactaatggaa
cattagaccccgagacaggtctctgcgcagaagtgagttttcagatgctt
cagttggtccgcactactgctggctcgactctgcccatctcaatgtactc
tggcagctgcatggtggagttgttttgaatgagtccctggtctcccagaa
gtctgtggaaacataggttttgtttcctatcctgcaagagaagggtagta
tgggaaacttctcaagccttaggaagacaaagaatttgattgcaaacata
atatatgcccacaaaacatgatatttaaagtagaaaacagaaaaatataa
cccatttctctttttgtccagtgtcatggttcattccccaatgtgttttc
tgagctcttcttagatccaactgtggccattttgtttacatacttttgta
attttgcttaacataagatcaaaagtatttctggagttagaagttttgct
gaccacttgaaatgatttgaaatgaagcagcctgttaatatatattctgt
ttactaatgtgatatattgttagaaattaaggaattttgcttgtgcttca
taagtttgaacattcccaggatgtctttactgaaggcatggcatggggcc
tctcacatggcacctggatgcccttctctttgggctgcaacagctttgtt
ggccttctctttcaaccattttctattgctttctttcaagttccatttca
ctgtggcctcttcatcttaccatacagatgttctattctgtggctgatat
atgcccctggagttcttatgccagagtagatatctgttggctttgggtgg
acttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_186110830_186111812
seq2: B6Ng01-245C06.b_50_1040 (reverse)

seq1  ATGCTACCTAG-ACATATAAAAA-TTGACCATCTTTAGCCATCAGAGAAA  48
      ||||| ||||| ||||||||||| | ||||||||| ||||||||||| ||
seq2  ATGCTTCCTAGAACATATAAAAAGTGGACCATCTTAAGCCATCAGAGGAA  50

seq1  TTCAAATCAAATCTAGATGAAG-AGCCTGTGAGATAT-ACTTAAC-AACT  95
      |||||||||||||||||||||| |||||||||||||| || |||| ||||
seq2  TTCAAATCAAATCTAGATGAAGAAGCCTGTGAGATATAACGTAACAAACT  100

seq1  CAAGTGTGATCTCTAAAGCCCACAGAAGGGCAG-AACCAAGTTCCAGAAG  144
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CAAGTGTGATCTCTAAAGCCCACAGAAGGGCAGAAACCAAGTTCCAGAAG  150

seq1  TTGTATTCTGACCTAATCATAATAGAAACCATTAAGAAAACATACAACAC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTCTGACCTAATCATAATAGAAACCATTAAGAAAACATACAACAC  200

seq1  GCAGGGTACAAAGGTGCATGCCTTTAT-CCCAGCACTTGGAAAGCAGAGG  243
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GCAGGGTACAAAGGTGCATGCCTTTATCCCCAGCACTTGGAAAGCAGAGG  250

seq1  CAAGTAGATCTCTGTAGATACTAGG-CCAGTCAGGACCATAGTGAGATCG  292
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CAAGTAGATCTCTGTAGATACTAGGCCCAGTCAGGACCATAGTGAGATCG  300

seq1  TCTCAAAGGGTGTGTGTGAGAGAGAGGGGGGTTGGGGTTAGTGAAGAAGA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAGGGTGTGTGTGAGAGAGAGGGGGGTTGGGGTTAGTGAAGAAGA  350

seq1  AAGAGCCTTACACCCTGCTGATGGGAATATGAAAATTAATGCAGAAAATC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCCTTACACCCTGCTGATGGGAATATGAAAATTAATGCAGAAAATC  400

seq1  ATTGTGGAACCCTCCTGTCCCCACCCACTCCACACTAAACACAGACCTAC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGAACCCTCCTGTCCCCACCCACTCCACACTAAACACAGACCTAC  450

seq1  AATATTACTGAGCTACGGCTGTCATAGAACCCATCTCTACAGTGGGAGCC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTACTGAGCTACGGCTGTCATAGAACCCATCTCTACAGTGGGAGCC  500

seq1  ACCCTACCCTACAATACCTAGGGCCCTGAGCAAACTCCACAAAGCACTGT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTACCCTACAATACCTAGGGCCCTGAGCAAACTCCACAAAGCACTGT  550

seq1  GTACCAGGCTGCTTTTATACTGGTCAGTGGGAAAAGAGAAGTGGCTTTGA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAGGCTGCTTTTATACTGGTCAGTGGGAAAAGAGAAGTGGCTTTGA  600

seq1  CTCGCTGACACAAAGCGTTGTTAGGACAGTATAACTACTCATCAGATTTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCTGACACAAAGCGTTGTTAGGACAGTATAACTACTCATCAGATTTT  650

seq1  ACTAATGAACTAATGAGGAAACCAGGTTTTAGAAATGTGACCAGGTGTCT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGAACTAATGAGGAAACCAGGTTTTAGAAATGTGACCAGGTGTCT  700

seq1  GACTTCAACCTTCATGATCTGAAATCTCACGCAGGTTTACAATAAGGCCA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCAACCTTCATGATCTGAAATCTCACGCAGGTTTACAATAAGGCCA  750

seq1  GCTTTATCATCTACATTTTTTTTTAAATTACATCTTCATTTTCTTTGTCC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATCATCTACATTTTTTTTTAAATTACATCTTCATTTTCTTTGTCC  800

seq1  AATTGCTTCTTTAAAGATGATTATTGTAACCCACAATGTATCATCTTTAC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTTCTTTAAAGATGATTATTGTAACCCACAATGTATCATCTTTAC  850

seq1  AAAGTACTGCATAAAACTATCTGTGTGGTTCCTTTGGGAAGATCTGTGGT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTACTGCATAAAACTATCTGTGTGGTTCCTTTGGGAAGATCTGTGGT  900

seq1  CTGTTCACAGTGGCTACACCATTTTACAGTCCCTGGGGCTCTGAGTACTG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCACAGTGGCTACACCATTTTACAGTCCCTGGGGCTCTGAGTACTG  950

seq1  ATCTTCTGGTATGGTTGTTACTTTCTGCTTATTTTGAATTC  983
      |||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTGGTATGGTTGTTACTTTCTGCTTATTTTGAATTC  991


seq1: chr1_185925750_185926902
seq2: B6Ng01-245C06.g_66_1220

seq1  GAATTCTTGGTCCCCAGCGAGTAGCACTATTTTGAGGGTTGTGGGAACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGTCCCCAGCGAGTAGCACTATTTTGAGGGTTGTGGGAACTT  50

seq1  TAGACCATGAGACCCAGTTGAAATAAGTAGGTCTCTGGGCCACCTGCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCATGAGACCCAGTTGAAATAAGTAGGTCTCTGGGCCACCTGCTTC  100

seq1  CCACTCAGTGGTGAAGGGAGCTGTCATGATGTCTTCACACAGGGCACGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCAGTGGTGAAGGGAGCTGTCATGATGTCTTCACACAGGGCACGGA  150

seq1  TATAAATGACTGGTTGAAACCTTTACCAGCTACAATTTGAAAGAATTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATGACTGGTTGAAACCTTTACCAGCTACAATTTGAAAGAATTCCT  200

seq1  TTCTTCTTTCCAGTGGTCTATGTCAGGTATTTCTGTGACAGCAGTACGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTTCCAGTGGTCTATGTCAGGTATTTCTGTGACAGCAGTACGAT  250

seq1  AGTCACCAATGTGGCAATCATTCCTAAGAGTTAAATCTCAAGTTTAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACCAATGTGGCAATCATTCCTAAGAGTTAAATCTCAAGTTTAGAGA  300

seq1  TAGTGGGTTGAAGAAGAGTCAGATGAATTTTATCTACTATACTAATGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGGTTGAAGAAGAGTCAGATGAATTTTATCTACTATACTAATGGAA  350

seq1  CATTAGACCCCGAGACAGGTCTCTGCGCAGAAGTGAGTTTTCAGATGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGACCCCGAGACAGGTCTCTGCGCAGAAGTGAGTTTTCAGATGCTT  400

seq1  CAGTTGGTCCGCACTACTGCTGGCTCGACTCTGCCCATCTCAATGTACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGGTCCGCACTACTGCTGGCTCGACTCTGCCCATCTCAATGTACTC  450

seq1  TGGCAGCTGCATGGTGGAGTTGTTTTGAATGAGTCCCTGGTCTCCCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCTGCATGGTGGAGTTGTTTTGAATGAGTCCCTGGTCTCCCAGAA  500

seq1  GTCTGTGGAAACATAGGTTTTGTTTCCTATCCTGCAAGAGAAGGGTAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGGAAACATAGGTTTTGTTTCCTATCCTGCAAGAGAAGGGTAGTA  550

seq1  TGGGAAACTTCTCAAGCCTTAGGAAGACAAAGAATTTGATTGCAAACATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAACTTCTCAAGCCTTAGGAAGACAAAGAATTTGATTGCAAACATA  600

seq1  ATATATGCCCACAAAACATGATATTTAAAGTAGAAAACAGAAAAATATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGCCCACAAAACATGATATTTAAAGTAGAAAACAGAAAAATATAA  650

seq1  CCCATTTCTCTTTTTGTCCAGTGTCATGGTTCATTCCCCAATGTGTTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTCTCTTTTTGTCCAGTGTCATGGTTCATTCCCCAATGTGTTTTC  700

seq1  TGAGCTCTTCTTAGATCCAACTGTGGCCATTTTGTTTACATACTTTTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCTTCTTAGATCCAACTGTGGCCATTTTGTTTACATACTTTTGTA  750

seq1  ATTTTGCTTAACATAAGATCAAAAGTATTTCTGGAGTTAGAAGTTTTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCTTAACATAAGATCAAAAGTATTTCTGGAGTTAGAAGTTTTGCT  800

seq1  GACCACTTGAAATGATTTGAAATGAAGCAGCCTGTTAATATATATTCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACTTGAAATGATTTGAAATGAAGCAGCCTGTTAATATATATTCTGT  850

seq1  TTACTAATGTGATATATTGTTAGAAATTAAGGAATTTTGCTTGTGCTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAATGTGATATATTGTTAGAAATTAAGGAATTTTGCTTGTGCTTCA  900

seq1  TAAGTTTGAACATTCCCAGGATGTCTTTACTGAAAGCATGGCAT-GGGCC  949
      |||||||||||||||||||||||||||||||||| ||||||||| |||||
seq2  TAAGTTTGAACATTCCCAGGATGTCTTTACTGAAGGCATGGCATGGGGCC  950

seq1  TCTCACATGGCACCTGGATGCCCTTCTCTTT-GGCTGC-ACAGCTTTGTT  997
      ||||||||||||||||||||||||||||||| |||||| |||||||||||
seq2  TCTCACATGGCACCTGGATGCCCTTCTCTTTGGGCTGCAACAGCTTTGTT  1000

seq1  GGCCTTCTCTTCCAACCCATTTCTATTGC-TTCTTTCAAGTCCCATTTCC  1046
      ||||||||||| |||||  |||||||||| ||||||||||| |||||| |
seq2  GGCCTTCTCTTTCAACCATTTTCTATTGCTTTCTTTCAAGTTCCATTT-C  1049

seq1  ACTGTTGGCTCTTCATCTTTACATACAGTTTGTCTATTTCTTGTTGGCTG  1096
      ||||| | |||||||||||  ||||||| |  |||| ||||   ||||||
seq2  ACTGTGGCCTCTTCATCTTACCATACAGATGTTCTA-TTCT--GTGGCTG  1096

seq1  -TATATGCCCCT-GAGTTCCTATGCACAGAGTAGATATTCTG-TGGCTTT  1143
       ||||||||||| |||||| ||||| ||||||||||| |||| |||||||
seq2  ATATATGCCCCTGGAGTTCTTATGC-CAGAGTAGATA-TCTGTTGGCTTT  1144

seq1  GGGTGG-CTTC  1153
      |||||| ||||
seq2  GGGTGGACTTC  1155


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