BAC Information

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BAC

Clone NameB6Ng01-245J02
Chromosome1 (Build37)
Map Location 148,537,253 - 148,538,343
singlet/doubletsinglet
Overlap geneB830045N13Rik
Upstream geneLOC383571
Downstream geneLOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245J02.bB6Ng01-245J02.g
ACCGA054417GA054418
length1,1911,086
definitionB6Ng01-245J02.b B6Ng01-245J02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaactttctctctttgaaatgcatggctgcttcttttttaattgt
ttatatatataatttagaaatatttatgaaaatatgtatatatgcatgca
catatacatatatgggtacataatacacatatatagatagatatttaaga
ataaatttgtatgcatatattcatctgtacacacacacatacacactcaa
acacatacacacacatacacacacacacacacacacacacacacatatac
acacacacacacatatacacacacacacatcttcctaactgcatactcat
atgtaacatttaatgagaacacagttcttaaaaatcatatagtttaggaa
ttttcttagattgcctcaggacatttaaattcttttcttttagtctcatt
cactagtgaggtaaataacaattttgtctttcgtaattcagattgtcatt
ttagttattaaaataaatgattagggactttattagaaaggaaatttggt
aacttttttttcaagtaaaataattatgttgagcctctcaagacaccatg
aataggacaaaagagcagacaatagaatgggaaacgattttcatcagctc
gcaattcaaaaaaggtctaatatctaaaatatgtacagaagtcaagaaat
tacatttctgcaaaccaagtaacacaattaaaaatagggtacagagctaa
ataaaattctcaacaaaggaatcactaatgggtgagaagcacttaatgaa
atattgaacatctttagtcaaatagggaaatgtagatcaaaatacctcct
ttttccatcttacacctgtcagaatgcctattatcaaaatccaaaaggac
tcatatgctggcagtttttggagcaaaaataacactcctctaatactggg
agtaagggcaaacctttataaccactctgggaatcaattggtatttgttt
gttgttattgtttgtttgttgaatactgaaaatagttctacctcaagact
cagttataccacacctaggccaaaaatatgcctccaacaatttccacaaa
gacacttactcaactatttttgtaccacttattttatagccagaatctgg
gaactactaatgtccctcaaccaagattgcataagaatatgttgatacaa
ctacaccactgaaaatacttaccttcagactatttattcac

gaattctaattagtgtgttagatcctggagactagaattaaagaattttc
taagttttcatatagatcctgagaactgaatgcaagtccttggaagagta
tcaaatgtccttaaacatgtacccatccctccagatccttcagaggattt
ttattttattaatttttgttctaacttctctaaatattatttctaccaat
aataacaatagacacataagaatgaaaattgaccaaaaccatataaaaag
caaatagtattaaagtgatttaatttctatttctttttggaattaacaga
acctatttgcatttgaggatagggaaaaaaataaccaaaatgacatagct
cagaagtatataaggctgtcagctaatcatagtgaagtataaaaaccatg
atttggttttgttttatatttctgtatttcacagtgtgcataaaagcatt
ctccaatttgtgctgttattgtacgcaaaccaccacagagcttcagttgg
agaaggcagctgcctgtttccatgcagaataatcacatcatcttatctgc
tatcatttatcttttttgtgttcttggagatttgaacacaaagtcttgga
gtgctgaaacactttcaaaagcacagtctctgtctgcaatatgttactgt
cctttgtatctcatgttttgcttacagatagcaacagttttagtcataca
tttctaaagcatttgtataaatgaatacttgtgggaaactttaaagttga
gaatgcaatcttcattatcatgtcttggtataagtatctcaaataatttt
aaaaaaaccattaaaatgatagttgttcatatttttaaattgaaaagaga
tgtctagcagcatatgtagcagaggttggccttgttgggacctaaatggg
agaagaggcccttggtcctatgaaagctcagtgccccagtgtagacaaat
gaaagctgagagcagagtgatgagtggggtggggggaacacctcatagag
taggggagggcgaatggattagctgcttgggggagaaaacagcatggaga
ataacatttgaaatgtcaaataacgaaaatatctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148537253_148538343
seq2: B6Ng01-245J02.g_67_1152

seq1  GAATTCTAATTAGTGTGTTAGATCCTGGAGACTAGAATTAAAGAATTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATTAGTGTGTTAGATCCTGGAGACTAGAATTAAAGAATTTTC  50

seq1  TAAGTTTTCATATAGATCCTGAGAACTGAATGCAAGTCCTTGGAAGAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTTCATATAGATCCTGAGAACTGAATGCAAGTCCTTGGAAGAGTA  100

seq1  TCAAATGTCCTTAAACATGTACCCATCCCTCCAGATCCTTCAGAGGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGTCCTTAAACATGTACCCATCCCTCCAGATCCTTCAGAGGATTT  150

seq1  TTATTTTATTAATTTTTGTTCTAACTTCTCTAAATATTATTTCTACCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATTAATTTTTGTTCTAACTTCTCTAAATATTATTTCTACCAAT  200

seq1  AATAACAATAGACACATAAGAATGAAAATTGACCAAAACCATATAAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAATAGACACATAAGAATGAAAATTGACCAAAACCATATAAAAAG  250

seq1  CAAATAGTATTAAAGTGATTTAATTTCTATTTCTTTTTGGAATTAACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAGTATTAAAGTGATTTAATTTCTATTTCTTTTTGGAATTAACAGA  300

seq1  ACCTATTTGCATTTGAGGATAGGGAAAAAAATAACCAAAATGACATAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATTTGCATTTGAGGATAGGGAAAAAAATAACCAAAATGACATAGCT  350

seq1  CAGAAGTATATAAGGCTGTCAGCTAATCATAGTGAAGTATAAAAACCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTATATAAGGCTGTCAGCTAATCATAGTGAAGTATAAAAACCATG  400

seq1  ATTTGGTTTTGTTTTATATTTCTGTATTTCACAGTGTGCATAAAAGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTTTTGTTTTATATTTCTGTATTTCACAGTGTGCATAAAAGCATT  450

seq1  CTCCAATTTGTGCTGTTATTGTACGCAAACCACCACAGAGCTTCAGTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAATTTGTGCTGTTATTGTACGCAAACCACCACAGAGCTTCAGTTGG  500

seq1  AGAAGGCAGCTGCCTGTTTCCATGCAGAATAATCACATCATCTTATCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCAGCTGCCTGTTTCCATGCAGAATAATCACATCATCTTATCTGC  550

seq1  TATCATTTATCTTTTTTGTGTTCTTGGAGATTTGAACACAAAGTCTTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTTATCTTTTTTGTGTTCTTGGAGATTTGAACACAAAGTCTTGGA  600

seq1  GTGCTGAAACACTTTCAAAAGCACAGTCTCTGTCTGCAATATGTTACTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGAAACACTTTCAAAAGCACAGTCTCTGTCTGCAATATGTTACTGT  650

seq1  CCTTTGTATCTCATGTTTTGCTTACAGATAGCAACAGTTTTAGTCATACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTATCTCATGTTTTGCTTACAGATAGCAACAGTTTTAGTCATACA  700

seq1  TTTCTAAAGCATTTGTATAAATGAATACTTGTGGGAAACTTTAAAGTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAAGCATTTGTATAAATGAATACTTGTGGGAAACTTTAAAGTTGA  750

seq1  GAATGCAATCTTCATTATCATGTCTTGGTATAAGTATCTCAAATAATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCAATCTTCATTATCATGTCTTGGTATAAGTATCTCAAATAATTTT  800

seq1  AAAAAAACCATTAAAATGATAGTTGTTCATATTTTTAAATTGAAAAGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACCATTAAAATGATAGTTGTTCATATTTTTAAATTGAAAAGAGA  850

seq1  TGTCTAGCAGCATATGTAGCAGAGGTTGGCCTTGTT-GGACCTAAATGGG  899
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGTCTAGCAGCATATGTAGCAGAGGTTGGCCTTGTTGGGACCTAAATGGG  900

seq1  AGAAGAGGCCCTTGGTCCTATGAAGGCTCAGTGCCCCAGTGTAGACAAAT  949
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGAAGAGGCCCTTGGTCCTATGAAAGCTCAGTGCCCCAGTGTAGACAAAT  950

seq1  GAAAGCTGAGGAAGCAGGAGTGAATGAGTGGG--TGGGGGAACACCCTCA  997
      ||||||||||  |||| ||||| |||||||||   ||||||||| |||||
seq2  GAAAGCTGAG--AGCA-GAGTG-ATGAGTGGGGTGGGGGGAACA-CCTCA  995

seq1  TAGAAGTAGGGGGAGGGCGAATGGATTAGCTGGTTTGGGGAGGAAAACCA  1047
      ||| |||| ||||||||||||||||||||||| || ||||||  ||| ||
seq2  TAG-AGTA-GGGGAGGGCGAATGGATTAGCTGCTTGGGGGAG--AAAACA  1041

seq1  GGAAGGGAGATAACATTTGAAATGT-AAATAAAGAAAATATCTAA  1091
      | | ||   |||||||||||||||| |||||| ||||||||||||
seq2  GCATGGAGAATAACATTTGAAATGTCAAATAACGAAAATATCTAA  1086


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