BAC Information

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BAC

Clone NameB6Ng01-246C05
Chromosome1 (Build37)
Map Location 102,112,156 - 102,113,184
singlet/doubletsinglet
Overlap geneC230078M14Rik
Upstream geneLOC633295
Downstream geneEG666200
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246C05.bB6Ng01-246C05.g
ACCGA054840GA054841
length1,1941,028
definitionB6Ng01-246C05.b B6Ng01-246C05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
tgagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggataaccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtaactgtctcatgtgagactatgccggggccctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcatagggctccc
aatggaggagctagagaaagtagccaaggagctaaagggatctgcaaccc
tataggtggaacacattatgaactaccagtacccggagctcttgactcta
gctgcatatatatcaaaagaatggctagtcggcaatcacttgaaagagag
gctcatgggacttgcacctttatattgcccaagttacagggaactcagtc
ctaacggcatggtgggcaggggagttggggtgatcatacaacta
gaattcagttgtcagttttatctttgcttagttgtttttttttttttttt
tttctgagatgcagcttctcccctatcctggagctcactgtttctgatga
gctggtgagcaaggccccaggatagtcactacctatcacctagctctgag
actgcaggtgcaaaacactcttacttaccttttacataagttctaaggac
aaatttagactctcatgcttatgcacagcaaattccaacttagcaatctt
ctcatcatcatgagttgcattatttacaggattagtcctcagaaatggca
gaaggtcaagaaacaaattgatttgaaaggtcttacttcatacttctaag
tgtctgaaagacttaagacagtgtatacttcacagttcttttctctgact
ttattttcacttttctgttggaatcacttaatagataaaactacttacca
tgtctttctgctaaatgcttggatatcaaaatggaagttaatatttgtac
tcttggagttagtatttttcatttgctttgtttaaattgtttaaatttga
ctgctaggaccatagaatgactgttcttcatttactgacaaactgccttg
tatatctgataattaatattttgattccctgaaacaaagaaggattttta
ctgaattatattctgactacactcaggaacagctccagttgactttatat
cttagaccagacaaagtcagtgcatgcctagctcatccccagctgcatga
acaaactcacttctctatatttttctttgtttcatcctgcttttctccaa
gctctttaaaaatccacctatttatccatcaattgacatccattaatata
agaggtgatactgtccccagaaaaaaagtaatttggagatcaattcagag
aagttgtcaccctgatgatcacctctatattaaatactatttatccctga
atttgtccctgggacacatatctgggaaagcatcagaaacggattcctgt
agttgtgccttagtctatgcatgattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_102112156_102113184
seq2: B6Ng01-246C05.g_67_1094

seq1  GAATTCAGTTGTCAGTTTTATCTTTGCTTAGTTGTTTTTTTTTTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTGTCAGTTTTATCTTTGCTTAGTTGTTTTTTTTTTTTTTTT  50

seq1  TTTCTGAGATGCAGCTTCTCCCCTATCCTGGAGCTCACTGTTTCTGATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAGATGCAGCTTCTCCCCTATCCTGGAGCTCACTGTTTCTGATGA  100

seq1  GCTGGTGAGCAAGGCCCCAGGATAGTCACTACCTATCACCTAGCTCTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGAGCAAGGCCCCAGGATAGTCACTACCTATCACCTAGCTCTGAG  150

seq1  ACTGCAGGTGCAAAACACTCTTACTTACCTTTTACATAAGTTCTAAGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGGTGCAAAACACTCTTACTTACCTTTTACATAAGTTCTAAGGAC  200

seq1  AAATTTAGACTCTCATGCTTATGCACAGCAAATTCCAACTTAGCAATCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAGACTCTCATGCTTATGCACAGCAAATTCCAACTTAGCAATCTT  250

seq1  CTCATCATCATGAGTTGCATTATTTACAGGATTAGTCCTCAGAAATGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCATCATGAGTTGCATTATTTACAGGATTAGTCCTCAGAAATGGCA  300

seq1  GAAGGTCAAGAAACAAATTGATTTGAAAGGTCTTACTTCATACTTCTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTCAAGAAACAAATTGATTTGAAAGGTCTTACTTCATACTTCTAAG  350

seq1  TGTCTGAAAGACTTAAGACAGTGTATACTTCACAGTTCTTTTCTCTGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAAAGACTTAAGACAGTGTATACTTCACAGTTCTTTTCTCTGACT  400

seq1  TTATTTTCACTTTTCTGTTGGAATCACTTAATAGATAAAACTACTTACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCACTTTTCTGTTGGAATCACTTAATAGATAAAACTACTTACCA  450

seq1  TGTCTTTCTGCTAAATGCTTGGATATCAAAATGGAAGTTAATATTTGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTCTGCTAAATGCTTGGATATCAAAATGGAAGTTAATATTTGTAC  500

seq1  TCTTGGAGTTAGTATTTTTCATTTGCTTTGTTTAAATTGTTTAAATTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGAGTTAGTATTTTTCATTTGCTTTGTTTAAATTGTTTAAATTTGA  550

seq1  CTGCTAGGACCATAGAATGACTGTTCTTCATTTACTGACAAACTGCCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAGGACCATAGAATGACTGTTCTTCATTTACTGACAAACTGCCTTG  600

seq1  TATATCTGATAATTAATATTTTGATTCCCTGAAACAAAGAAGGATTTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTGATAATTAATATTTTGATTCCCTGAAACAAAGAAGGATTTTTA  650

seq1  CTGAATTATATTCTGACTACACTCAGGAACAGCTCCAGTTGACTTTATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTATATTCTGACTACACTCAGGAACAGCTCCAGTTGACTTTATAT  700

seq1  CTTAGACCAGACAAAGTCAGTGCATGCCTAGCTCATCCCCAGCTGCATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGACCAGACAAAGTCAGTGCATGCCTAGCTCATCCCCAGCTGCATGA  750

seq1  ACAAACTCACTTCTCTATATTTTTCTTTGTTTCATCCTGCTTTTCTCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTCACTTCTCTATATTTTTCTTTGTTTCATCCTGCTTTTCTCCAA  800

seq1  GCTCTTTAAAAATCCACCTATTTATCCATCAATTGACATCCATTAATATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTAAAAATCCACCTATTTATCCATCAATTGACATCCATTAATATA  850

seq1  AGAGGTGATACTGTCCCCAGAAAAAAAGTAATTTGGAGATCAATTCAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGATACTGTCCCCAGAAAAAAAGTAATTTGGAGATCAATTCAGAG  900

seq1  AAGTTGTCACCCTGATGATCACCTCTTATATTAAATACTATTTAT-CCTG  949
      ||||||||||||||||||||||||| ||||||||||||||||||| ||||
seq2  AAGTTGTCACCCTGATGATCACCTC-TATATTAAATACTATTTATCCCTG  949

seq1  AATTTGTCCCCTGGGACACATATCT-GGAAAGCATCAGGAAAGTGATTCC  998
      ||||||| ||||||||||||||||| ||||||||||| ||||  ||||||
seq2  AATTTGT-CCCTGGGACACATATCTGGGAAAGCATCA-GAAACGGATTCC  997

seq1  TGTAAGTTGTTCTCTAGTCTATG-ATGATTTA  1029
      ||| |||||| |  ||||||||| ||||||||
seq2  TGT-AGTTGTGCCTTAGTCTATGCATGATTTA  1028