BAC Information

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BAC

Clone NameB6Ng01-246C23
Chromosome1 (Build37)
Map Location 72,328,035 - 72,530,414
singlet/doubletdoublet
Overlap genePecr, Tmem169, Xrcc5, March4
Upstream geneAbca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528, LOC675667, EG667931, EG433319, LOC667937, LOC100043255, Mreg
Downstream geneSmarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5, LOC672187, LOC100042860, Tnp1, 1700027A15Rik, Pinc, LOC672208
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246C23.bB6Ng01-246C23.g
ACCGA054874GA054875
length567767
definitionB6Ng01-246C23.b B6Ng01-246C23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,328,035 - 72,328,607)(72,529,649 - 72,530,414)
sequence
tcggcagcaggtgcctccgtacaacacagtcttagtaactgtgcatttaa
taagcactatgggcaacagccagccagacgttatccttcctaattgaaac
tttgcaccctttcaactcctgcttttatttactcgggggaactcctagaa
cgtattctgggcacattcaccccatccccaactccctccagatgacactg
gcacttctgaccaaccccttcctaccaacactagcctggtgtggttatag
cacagccttcctccaccccagtacatgtctgtaactagaaatgaaagact
tttcaacaacaacaacaacaacaacaacactaacaacaacaacaaaggta
aggagacatttgtaattcccccccccccccaaagatgaccagtttgtttt
gcatagcattagctcacggtcgctgctaggtctcctttatgctgtgctgt
gctgtgccagggacacctgtaacagttgttaagacgttctgatagcctat
atatctgaggaaggcagaccagctaacactttactaaagaatttatctgt
gtgtgtggggggggggg
gaattcagactggctgtcccaaagcagagcaagttctctgtgtcactcta
gaaaacagaaatggaggctgagaatagcaaagagcatggatttttgtgta
gctggacttcagctactttgtgggttcttctttctttcactctttcaacc
ttctaacactaggtaggaaagaaatgtgggggagaacggagaaataaatc
cctgaaaaagtcagtggtaggaaagggggcaacaatatccttagattcct
tcctgctgattagggccttgggcaagtttgatctttgctgtcgggatatc
taattttttcttctcgtatctttgcccatgactacttgacaaagggcaac
aaacatcaatcaacggcaacccaccaaccaactccctcaggaccctagca
tttatagaccctctaaaaagtccccagaattccaaacctcacccagtcac
agaaactatttgcagctggcaaaaccacacccctgctagagcatgaggca
aatcatagtcagctgctgtggacagtctgaagcagccctgtatcccacac
ctgggattaaaacgaaaacacatttttatatttctgtgcttttaaagaaa
ccaaaatcctcacatttctgtttagagtaagtatcagctgtttactaact
gcaattgccctcaatgaaggagcagcctctataaggagagacactctgag
ggcaaagctagataaccacctggtggccatgcttaccagagtgcttggtg
gtggtggggggggggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_72328035_72328607
seq2: B6Ng01-246C23.b_50_622

seq1  GAATTCTCGGCAGCAGGTGCCTCCGTACAACACAGTCTTAGTAACTGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCGGCAGCAGGTGCCTCCGTACAACACAGTCTTAGTAACTGTGC  50

seq1  ATTTAATAAGCACTATGGGCAACAGCCAGCCAGACGTTATCCTTCCTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATAAGCACTATGGGCAACAGCCAGCCAGACGTTATCCTTCCTAAT  100

seq1  TGAAACTTTGCACCCTTTCAACTCCTGCTTTTATTTACTCGGGGGAACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTTTGCACCCTTTCAACTCCTGCTTTTATTTACTCGGGGGAACTC  150

seq1  CTAGAACGTATTCTGGGCACATTCACCCCATCCCCAACTCCCTCCAGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACGTATTCTGGGCACATTCACCCCATCCCCAACTCCCTCCAGATG  200

seq1  ACACTGGCACTTCTGACCAACCCCTTCCTACCAACACTAGCCTGGTGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGCACTTCTGACCAACCCCTTCCTACCAACACTAGCCTGGTGTGG  250

seq1  TTATAGCACAGCCTTCCTCCACCCCAGTACATGTCTGTAACTAGAAATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGCACAGCCTTCCTCCACCCCAGTACATGTCTGTAACTAGAAATGA  300

seq1  AAGACTTTTCAACAACAACAACAACAACAACAACACTAACAACAACAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTTTCAACAACAACAACAACAACAACAACACTAACAACAACAACA  350

seq1  AAGGTAAGGAGACATTTGTAATTCCCCCCCCCCCCCAAAGATGACCAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAAGGAGACATTTGTAATTCCCCCCCCCCCCCAAAGATGACCAGTT  400

seq1  TGTTTTGCATAGCATTAGCTCACGGTCGCTGCTAGGTCTCCTTTATGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGCATAGCATTAGCTCACGGTCGCTGCTAGGTCTCCTTTATGCTG  450

seq1  TGCTGTGCTGTGCCAGGGACACCTGTAACAGTTGTTAAGACGTTCTGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGCTGTGCCAGGGACACCTGTAACAGTTGTTAAGACGTTCTGATA  500

seq1  GCCTATATATCTGAGGAAGGCAGACCAGCTAACACTTTACTAAAGAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATATATCTGAGGAAGGCAGACCAGCTAACACTTTACTAAAGAATTT  550

seq1  ATCTGTGTGTGTGGGGGGGGGGG  573
      |||||||||||||||||||||||
seq2  ATCTGTGTGTGTGGGGGGGGGGG  573

seq1: chr1_72529649_72530414
seq2: B6Ng01-246C23.g_64_830 (reverse)

seq1  TG-CCCCCCCCCACCACCACCAAGCACTCTGGTAAGCATGGCCACCAGGT  49
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCCCCCCACCACCACCAAGCACTCTGGTAAGCATGGCCACCAGGT  50

seq1  GGTTATCTAGCTTTGCCCTCAGAGTGTCTCTCCTTATAGAGGCTGCTCCT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATCTAGCTTTGCCCTCAGAGTGTCTCTCCTTATAGAGGCTGCTCCT  100

seq1  TCATTGAGGGCAATTGCAGTTAGTAAACAGCTGATACTTACTCTAAACAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAGGGCAATTGCAGTTAGTAAACAGCTGATACTTACTCTAAACAG  150

seq1  AAATGTGAGGATTTTGGTTTCTTTAAAAGCACAGAAATATAAAAATGTGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGAGGATTTTGGTTTCTTTAAAAGCACAGAAATATAAAAATGTGT  200

seq1  TTTCGTTTTAATCCCAGGTGTGGGATACAGGGCTGCTTCAGACTGTCCAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGTTTTAATCCCAGGTGTGGGATACAGGGCTGCTTCAGACTGTCCAC  250

seq1  AGCAGCTGACTATGATTTGCCTCATGCTCTAGCAGGGGTGTGGTTTTGCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTGACTATGATTTGCCTCATGCTCTAGCAGGGGTGTGGTTTTGCC  300

seq1  AGCTGCAAATAGTTTCTGTGACTGGGTGAGGTTTGGAATTCTGGGGACTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCAAATAGTTTCTGTGACTGGGTGAGGTTTGGAATTCTGGGGACTT  350

seq1  TTTAGAGGGTCTATAAATGCTAGGGTCCTGAGGGAGTTGGTTGGTGGGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGGGTCTATAAATGCTAGGGTCCTGAGGGAGTTGGTTGGTGGGTT  400

seq1  GCCGTTGATTGATGTTTGTTGCCCTTTGTCAAGTAGTCATGGGCAAAGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTTGATTGATGTTTGTTGCCCTTTGTCAAGTAGTCATGGGCAAAGAT  450

seq1  ACGAGAAGAAAAAATTAGATATCCCGACAGCAAAGATCAAACTTGCCCAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGAAGAAAAAATTAGATATCCCGACAGCAAAGATCAAACTTGCCCAA  500

seq1  GGCCCTAATCAGCAGGAAGGAATCTAAGGATATTGTTGCCCCCTTTCCTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTAATCAGCAGGAAGGAATCTAAGGATATTGTTGCCCCCTTTCCTA  550

seq1  CCACTGACTTTTTCAGGGATTTATTTCTCCGTTCTCCCCCACATTTCTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGACTTTTTCAGGGATTTATTTCTCCGTTCTCCCCCACATTTCTTT  600

seq1  CCTACCTAGTGTTAGAAGGTTGAAAGAGTGAAAGAAAGAAGAACCCACAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCTAGTGTTAGAAGGTTGAAAGAGTGAAAGAAAGAAGAACCCACAA  650

seq1  AGTAGCTGAAGTCCAGCTACACAAAAATCCATGCTCTTTGCTATTCTCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTGAAGTCCAGCTACACAAAAATCCATGCTCTTTGCTATTCTCAG  700

seq1  CCTCCATTTCTGTTTTCTAGAGTGACACAGAGAACTTGCTCTGCTTTGGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATTTCTGTTTTCTAGAGTGACACAGAGAACTTGCTCTGCTTTGGG  750

seq1  ACAGCCAGTCTGAATTC  766
      |||||||||||||||||
seq2  ACAGCCAGTCTGAATTC  767