BAC Information

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BAC

Clone NameB6Ng01-246H06
Chromosome1 (Build37)
Map Location 113,925,008 - 113,926,099
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666578, Dsel, LOC547247
Downstream geneEG626897, LOC666615, LOC666635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246H06.bB6Ng01-246H06.g
ACCGA055064GA055065
length2111,095
definitionB6Ng01-246H06.b B6Ng01-246H06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctatgttcagtgagttgattaagtggagtcttcaacaacaagg
ccatgctatcagtttgtggagagcagcctactactgtcttgtagtttgtt
ctggaatccatacaaccacttttactaacagtttgagcttcatttagtga
aaaaagatgttctcactgaactctgcctccaatatcattggataatttca
gttagggtgtg

gaattccttttggcaaattaactgactctaatgattcagagcctttgatt
gtatttggtctttgaggagaaagatgaaaaaaacaattacaatttcttat
tctgttgaacaataattctcagtaatatctggattggcaaggcacagggt
taagattataataaaggctgcttcagatctcctttccccaatcaaaaaaa
aaaaaaaaaaaaagtcatttgctacgtttaaatcaccatatcatacccag
tagccagctttgcggggaagattgacaagctgcaatattcagtcctgcgg
ttcagaagataagctaatagctgtgtgcagcaaatcatctgcagactgca
attgagaagtgtgcttgattgttccgtcttttgcaatttgcattcatctc
acagacgaaggtgctttgggaacagacactagtaatgaacaaagatcaga
agacttaagatattgcaggttttgatgagaaagactagagtatattaaca
gaatacatttttttttttttactttctattttctactgagaggataataa
tagatgcaaaaattttaaaaatgcttcaggcatttggaattactttattt
ttctcaccaaagttgatgggggacacatttatcaaaccaactgtcatatc
cctggaagaatttttacttgaaaaggcatgcaaaatccacattttctaaa
tggctataagaagaaataatcattttaaataaattacattacttttcttc
tccaaactaatgttaaacacaatttattccaagaaagattttacaacatc
ctagaaaaacaaaaatctgttagtagtcttactcacttttgcttatataa
taattgcagttttgggactagatagtaatgcttttacctcaaatataagg
taggtaacaatggattgtaagctatcctttataatcattgtcaggagtta
ctctagaaaagaacactgaatggtggaagagcacttttttttctttcatg
gctgcatttctgctatgtagaaaaacaaacattttgggtgggttgattag
gcttgatcataactatggacaaatacagtacaagtaagcacatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_113925008_113926099
seq2: B6Ng01-246H06.g_66_1160

seq1  GAATTCCTTTTGGCAAATTAACTGACTCTAATGATTCAGAGCCTTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTGGCAAATTAACTGACTCTAATGATTCAGAGCCTTTGATT  50

seq1  GTATTTGGTCTTTGAGGAGAAAGATGAAAAAAACAATTACAATTTCTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGGTCTTTGAGGAGAAAGATGAAAAAAACAATTACAATTTCTTAT  100

seq1  TCTGTTGAACAATAATTCTCAGTAATATCTGGATTGGCAAGGCACAGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGAACAATAATTCTCAGTAATATCTGGATTGGCAAGGCACAGGGT  150

seq1  TAAGATTATAATAAAGGCTGCTTCAGATCTCCTTTCCCCAATCAAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTATAATAAAGGCTGCTTCAGATCTCCTTTCCCCAATCAAAAAAA  200

seq1  AAAAAAAAAAAAAGTCATTTGCTACGTTTAAATCACCATATCATACCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAGTCATTTGCTACGTTTAAATCACCATATCATACCCAG  250

seq1  TAGCCAGCTTTGCGGGGAAGATTGACAAGCTGCAATATTCAGTCCTGCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAGCTTTGCGGGGAAGATTGACAAGCTGCAATATTCAGTCCTGCGG  300

seq1  TTCAGAAGATAAGCTAATAGCTGTGTGCAGCAAATCATCTGCAGACTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAGATAAGCTAATAGCTGTGTGCAGCAAATCATCTGCAGACTGCA  350

seq1  ATTGAGAAGTGTGCTTGATTGTTCCGTCTTTTGCAATTTGCATTCATCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAAGTGTGCTTGATTGTTCCGTCTTTTGCAATTTGCATTCATCTC  400

seq1  ACAGACGAAGGTGCTTTGGGAACAGACACTAGTAATGAACAAAGATCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACGAAGGTGCTTTGGGAACAGACACTAGTAATGAACAAAGATCAGA  450

seq1  AGACTTAAGATATTGCAGGTTTTGATGAGAAAGACTAGAGTATATTAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTAAGATATTGCAGGTTTTGATGAGAAAGACTAGAGTATATTAACA  500

seq1  GAATACATTTTTTTTTTTTTACTTTCTATTTTCTACTGAGAGGATAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACATTTTTTTTTTTTTACTTTCTATTTTCTACTGAGAGGATAATAA  550

seq1  TAGATGCAAAAATTTTAAAAATGCTTCAGGCATTTGGAATTACTTTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGCAAAAATTTTAAAAATGCTTCAGGCATTTGGAATTACTTTATTT  600

seq1  TTCTCACCAAAGTTGATGGGGGACACATTTATCAAACCAACTGTCATATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACCAAAGTTGATGGGGGACACATTTATCAAACCAACTGTCATATC  650

seq1  CCTGGAAGAATTTTTACTTGAAAAGGCATGCAAAATCCACATTTTCTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAAGAATTTTTACTTGAAAAGGCATGCAAAATCCACATTTTCTAAA  700

seq1  TGGCTATAAGAAGAAATAATCATTTTAAATAAATTACATTACTTTTCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATAAGAAGAAATAATCATTTTAAATAAATTACATTACTTTTCTTC  750

seq1  TCCAAACTAATGTTAAACACAATTTATTCCAAGAAAGATTTTACAACATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACTAATGTTAAACACAATTTATTCCAAGAAAGATTTTACAACATC  800

seq1  CTAG-AAAACAAAAATCTGTTAGTAGTCTTACTCAC-TTTGCTTATATAA  848
      |||| ||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTAGAAAAACAAAAATCTGTTAGTAGTCTTACTCACTTTTGCTTATATAA  850

seq1  TAATTGCAGTTTT-GGACTAGATAGTAATGCTTTTACCTCAAATATAA-G  896
      ||||||||||||| |||||||||||||||||||||||||||||||||| |
seq2  TAATTGCAGTTTTGGGACTAGATAGTAATGCTTTTACCTCAAATATAAGG  900

seq1  TAGGTAACAATGGATTGTAAGCTATCCTTTATAATCATTGTCA-GAGTTA  945
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAGGTAACAATGGATTGTAAGCTATCCTTTATAATCATTGTCAGGAGTTA  950

seq1  CTCTTAGAAAG-ACACTGAAT-GTGGAAGAGCAC-TTTTTTTCTTTCATG  992
      ||||   |||| ||||||||| |||||||||||| |||||||||||||||
seq2  CTCTAGAAAAGAACACTGAATGGTGGAAGAGCACTTTTTTTTCTTTCATG  1000

seq1  GCTGCATTTCTGCTATGTAGAAAA--CAACATTTT-GGTGTGTTGAATTT  1039
      ||||||||||||||||||||||||   |||||||| |||| |||||  ||
seq2  GCTGCATTTCTGCTATGTAGAAAAACAAACATTTTGGGTGGGTTGA--TT  1048

seq1  AGGCTTGATTCATAAACTAATGAACAAAATACAGTAACAAGTTAAGCACA  1089
      |||||||| |||| |||| ||| || ||||||||| ||||| ||||||||
seq2  AGGCTTGA-TCAT-AACT-ATGGAC-AAATACAGT-ACAAG-TAAGCACA  1092

seq1  TGT  1092
      |||
seq2  TGT  1095


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