BAC Information

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BAC

Clone NameB6Ng01-246L11
Chromosome1 (Build37)
Map Location 115,899,665 - 115,900,750
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246L11.bB6Ng01-246L11.g
ACCGA055251GA055252
length1,1921,093
definitionB6Ng01-246L11.b B6Ng01-246L11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagttcagctaatggatggatcacagggctccc
aatggaggagctagagaaaggtacccaaggagcctaaagggatcttcaac
cctataaggtggaacaaacattatgacctaccagtacccttgagctcttg
acttctagctgcatattgtaatcaaaagatgcctagttcggccatcactg
gtaagagaggtccattgacaccgccagacttttggtgtgcctcggtacag
gaaatcgccaaggactcaaatggatgggggagatagtggcat
gaattctcaatttcaaactcagaatttcaagttcacatggaaagcactta
agtgacattgccatctccttagccacatggggatattttaaaggaatatt
tggccaatctttacatggctaaatgaatgaagaaagcttctccttaaggg
gatagccatgaaaatcatatgggtatatattctgagatacttccagaaca
tgaaaatttgtagaattagtaagatattttttaaaaaggataattttcaa
tggttttgctaaagagcatctagataaagacctaggtgatgatttgaacc
agcattatgagaagtaacagaggacaatatacaatgtattacctagggct
ccctagagggacagaagcaacagaacaaatgtaaaataaagactatattt
atttggttggtttacatgatataaagtaggtcagcaatagccatctgaat
tcagaagagactgacaaccctgcagcttctcaatttacaagagtcgatgc
ctcagtagttccaatcagattactaaagcctggagaattcctggagatct
gctgctctccattttatgttggaagactaagaaactgggatctgatggta
atggagaaatgcataaaagttcaccattggaaatacaatgactaatgaac
acatatcatttttacaccatgacatggctggaagcttgtaagtcaaatcc
tactaagttgggagctatctagaggctaatcatattcttcattttatatt
tggagccacatagtctgaaatgtttgtcatgcagacatttactgaagttt
tccaaagacccactctaagaagcacaatcagaaaactctcttccctttct
ccctcatctcaggacctcagaaaagccaagatcaagtaaaggaagtgagg
tagaagcaaacagaatagctctttagaccagaggagagcagagagactct
tcacagggaaaacagagacagccagattacaggatatatccaggtttagc
ttcagagtagcagtgatcaccatgctatttcacatcagttaagataaagg
ccaagaatagcccagaacttcttgtcatagagtagcaagaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_115899665_115900750
seq2: B6Ng01-246L11.g_65_1157 (reverse)

seq1  GCTTC-TGCTACTCTATGACAAG-AGTTCT-GGCTA-TCTTGCCCTTTAT  46
      ||||| ||||||||||||||||| |||||| ||||| ||||| |||||||
seq2  GCTTCTTGCTACTCTATGACAAGAAGTTCTGGGCTATTCTTGGCCTTTAT  50

seq1  CTT-ACTGATGTGAAATAGCATGGTGATCACTGCTTACTCTGAAGCTAAA  95
      ||| |||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTAACTGATGTGAAATAGCATGGTGATCACTGC-TACTCTGAAGCTAAA  99

seq1  -CTGGATATATCCTGTAATCTGGCTGTCTCTGTTTTCCCTGTGAAGAGTC  144
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATATATCCTGTAATCTGGCTGTCTCTGTTTTCCCTGTGAAGAGTC  149

seq1  TCTCTGCTCTCCTCTGGTCTAAAGAGCTATTCTGTTTGCTTCTACCTCAC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCTCTCCTCTGGTCTAAAGAGCTATTCTGTTTGCTTCTACCTCAC  199

seq1  TTCC-TTACTTGATCTTGGCTTTTCTGAGGTCCTGAGATGAGGGAGAAAG  243
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTACTTGATCTTGGCTTTTCTGAGGTCCTGAGATGAGGGAGAAAG  249

seq1  GGAAGAGAGTTTTCTGATTGTGCTTCTTAGAGTGGGTCTTTGG-AAACTT  292
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGAAGAGAGTTTTCTGATTGTGCTTCTTAGAGTGGGTCTTTGGAAAACTT  299

seq1  CAGTAAATGTCTGCATGACAAACATTTCAGACTATGTGGCTCCAAATATA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAATGTCTGCATGACAAACATTTCAGACTATGTGGCTCCAAATATA  349

seq1  AAATGAAGAATATGATTAGCCTCTAGATAGCTCCCAACTTAGTAGGATTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGAATATGATTAGCCTCTAGATAGCTCCCAACTTAGTAGGATTT  399

seq1  GACTTACAAGCTTCCAGCCATGTCATGGTGTAAAAATGATATGTGTTCAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTACAAGCTTCCAGCCATGTCATGGTGTAAAAATGATATGTGTTCAT  449

seq1  TAGTCATTGTATTTCCAATGGTGAACTTTTATGCATTTCTCCATTACCAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATTGTATTTCCAATGGTGAACTTTTATGCATTTCTCCATTACCAT  499

seq1  CAGATCCCAGTTTCTTAGTCTTCCAACATAAAATGGAGAGCAGCAGATCT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCCAGTTTCTTAGTCTTCCAACATAAAATGGAGAGCAGCAGATCT  549

seq1  CCAGGAATTCTCCAGGCTTTAGTAATCTGATTGGAACTACTGAGGCATCG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAATTCTCCAGGCTTTAGTAATCTGATTGGAACTACTGAGGCATCG  599

seq1  ACTCTTGTAAATTGAGAAGCTGCAGGGTTGTCAGTCTCTTCTGAATTCAG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGTAAATTGAGAAGCTGCAGGGTTGTCAGTCTCTTCTGAATTCAG  649

seq1  ATGGCTATTGCTGACCTACTTTATATCATGTAAACCAACCAAATAAATAT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTATTGCTGACCTACTTTATATCATGTAAACCAACCAAATAAATAT  699

seq1  AGTCTTTATTTTACATTTGTTCTGTTGCTTCTGTCCCTCTAGGGAGCCCT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTATTTTACATTTGTTCTGTTGCTTCTGTCCCTCTAGGGAGCCCT  749

seq1  AGGTAATACATTGTATATTGTCCTCTGTTACTTCTCATAATGCTGGTTCA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAATACATTGTATATTGTCCTCTGTTACTTCTCATAATGCTGGTTCA  799

seq1  AATCATCACCTAGGTCTTTATCTAGATGCTCTTTAGCAAAACCATTGAAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCACCTAGGTCTTTATCTAGATGCTCTTTAGCAAAACCATTGAAA  849

seq1  ATTATCCTTTTTAAAAAATATCTTACTAATTCTACAAATTTTCATGTTCT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCTTTTTAAAAAATATCTTACTAATTCTACAAATTTTCATGTTCT  899

seq1  GGAAGTATCTCAGAATATATACCCATATGATTTTCATGGCTATCCCCTTA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTATCTCAGAATATATACCCATATGATTTTCATGGCTATCCCCTTA  949

seq1  AGGAGAAGCTTTCTTCATTCATTTAGCCATGTAAAGATTGGCCAAATATT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAGCTTTCTTCATTCATTTAGCCATGTAAAGATTGGCCAAATATT  999

seq1  CCTTTAAAATATCCCCATGTGGCTAAGGAGATGGCAATGTCACTTAAGTG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAAATATCCCCATGTGGCTAAGGAGATGGCAATGTCACTTAAGTG  1049

seq1  CTTTCCATGTGAACTTGAAATTCTGAGTTTGAAATTGAGAATTC  1086
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCATGTGAACTTGAAATTCTGAGTTTGAAATTGAGAATTC  1093