BAC Information

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BAC

Clone NameB6Ng01-246N10
Chromosome1 (Build37)
Map Location 171,637,340 - 171,638,145
singlet/doubletsinglet
Overlap genenone
Upstream geneEG383613, Nuf2, Rgs5
Downstream geneRgs4, LOC100039960, 1700084C01Rik, Hsd17b7, Ddr2, LOC100040571, Uap1, Uhmk1, Sh2d1b2, EG622708, Sh2d1b1, EG665574, 1700015E13Rik, Nos1ap, LOC100040002, LOC640532, Olfml2b, Atf6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246N10.bB6Ng01-246N10.g
ACCGA055340GA055341
length8101,092
definitionB6Ng01-246N10.b B6Ng01-246N10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccattacgatacatagcaacaaaccaaatctcaataatttccc
ttttttgtccaataaaaaggttctttctcttataataataaacaacatac
agtataaacaattatgaaacaattatgcaaattaataggttaagaagtcc
ttactccctgagtcgtctccccagccctgataggtgcttttaaaatatgt
atttattagctacttgtgtatttctcttggctccatgcttgttcatgttg
tagacattattaatgtcttgcctttttatagtcaaagtgaagtaatttta
tttatgttttgtgttcaggtttatttcaaattttctcctggggtatagtg
tgcctttctaatttcttaaaactaccatatactaagaagaatttttaact
aatacaaaatcacttccattcttctcatttatggctagtgttcatgtgta
tgtgcttcaagaatcttgatctaaagcagaatcatgagaatattgtccta
tgttgtcctcttagaacgttagtttgcatttttaattcatgtgtagtgcc
atttttgagaactctggaattttgtattcttttttaaaaatacagaaata
ttataagaatatggtttttgttctaatcccaggtgtgaggataggggctg
ctttgcagctctttggttatgatttgcctcatgctctagcaaagatgtgg
ttttgccgcttatagtttctacagatgtgtcatgtttgaaactctgggaa
ctttgacacatggatatataaatgctagaggccgggttcggtggttgtac
ggtcattggg
gaattccaaatcccgctaatgagatgcgctacgaaccccatacgcttccc
gaagcgccacagctccacatagcaattgaacagatggtctatagaatctt
ctctgactcattcctgtgatgtagaattctccgggtgggtgacaaatccc
ttagatagtataaggaaatctgggagttttttttttccaccacgaaagta
cccatctgtatgaaaacaaatataaaaacatacttttacatgttgataga
ctttcttgtgatctccaggcaacaggaaacaattagaaaaatgaaggagt
tggctgtccctggaggtctttttgagaatcctgtgattgttagcctctgg
gcaatcactggctcattttaactaatacagtacacactgggacatagcca
ctgttctagctcagattgggtttaagctttaacaaagtgggggaaatctt
gatttttattattttgagagcctgaagctgccatgtgaaaatcaatcatg
ctttaggacaccttgaagggatgagaaggagggaggaaggaggaggaggc
tctacttttcttgacatcagaacagcctcgatggagtaagagctcaataa
atacttgtaccttggttgataactagttcacttatccagatgtgtcagat
ttcatctgagagttagaaacaatgctcattttcattattcttaaaaataa
acgtttgaagcctgtttctagaaaatagaactgacaagcaaactgaattg
caaggttagggtgctgacagaaggagaaagactcattagaaccaaagccc
agccctgaatctgtgtcgtttatgttacagtgaacacagaatgagccaag
gtgaaagggcacttagggctgggagtcagtcagcgggcacggaaactcta
ggaagagttcagtggggatctgatacagcacacctactttagggagtggg
gatttcctcacagaaactgatgctccattttagggcacttagtaccaagg
ggagcaacatgtggcttttcattcctcgtgtctggtacacattccaaaat
ggcaaaatatggaaccaatggtcccaggcaaatccgatagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_171637340_171638145
seq2: B6Ng01-246N10.b_42_851

seq1  GAATTCAGCATTACGATACATAGCAACAAACCAAATCTCAATAATTTCCC  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCATTACGATACATAGCAACAAACCAAATCTCAATAATTTCCC  50

seq1  TTTTTTGTCCAATAAAAAGGTTCTTTCTCTTATAATAATAAACAACATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTCCAATAAAAAGGTTCTTTCTCTTATAATAATAAACAACATAC  100

seq1  AGTAGAAACAATTATGAAACAATTATGCAAATTAATAGGTTAAGAAGTCC  150
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAAACAATTATGAAACAATTATGCAAATTAATAGGTTAAGAAGTCC  150

seq1  TTACTCCCTGAGTCGTCTCCCCAGCCCTGATAGGTGCTTTTAAAATATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCCCTGAGTCGTCTCCCCAGCCCTGATAGGTGCTTTTAAAATATGT  200

seq1  ATTTATTAGCTACTTGTGTATTTCTCTTGGCTCCATGCTTGTTCATGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTAGCTACTTGTGTATTTCTCTTGGCTCCATGCTTGTTCATGTTG  250

seq1  TAGACATTATTAATGTCTTGCCTTTTTATAGTCAAAGTGAAGTAATTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATTATTAATGTCTTGCCTTTTTATAGTCAAAGTGAAGTAATTTTA  300

seq1  TTTATGTTTTGTGTTCAGGTTTATTTCAAATTTTCTCCTGGGGTATAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTTTGTGTTCAGGTTTATTTCAAATTTTCTCCTGGGGTATAGTG  350

seq1  TGCCTTTCTAATTTCTTAAAACTACCATATACTAAGAAGAATTTTTAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTCTAATTTCTTAAAACTACCATATACTAAGAAGAATTTTTAACT  400

seq1  AATACAAAATCACTTCCATTCTTCTCATTTATGGCTAGTGTTCATGTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAAATCACTTCCATTCTTCTCATTTATGGCTAGTGTTCATGTGTA  450

seq1  TGTGCTTCAAGAATCTTGATCTAAAGCAGAATCATGAGAATATTGTCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTCAAGAATCTTGATCTAAAGCAGAATCATGAGAATATTGTCCTA  500

seq1  TGTTGTCCTCTTAGAACGTTAGTTTGCATTTTTAATTCATGTGTAGTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCCTCTTAGAACGTTAGTTTGCATTTTTAATTCATGTGTAGTGCC  550

seq1  ATTTTTGAGAACTCTGGAATTTTGTATTCTTTTTTAAAAATACAGAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGAGAACTCTGGAATTTTGTATTCTTTTTTAAAAATACAGAAATA  600

seq1  TTATAAGAATATGGTTTTTGTTCTAATCCCAGGTGTGAGGATAGGGGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGAATATGGTTTTTGTTCTAATCCCAGGTGTGAGGATAGGGGCTG  650

seq1  CTTTGCAGC-AGTTGGTTATGATTTGCCTCATGCTCTAGCAGAAGTGTGG  699
      |||||||||   ||||||||||||||||||||||||||||| |  |||||
seq2  CTTTGCAGCTCTTTGGTTATGATTTGCCTCATGCTCTAGCAAAGATGTGG  700

seq1  TTTTGCCACTTAGAGTTTCTACAGTTGTGTAATGTTTGAAACTCTGGGAA  749
      ||||||| |||| ||||||||||| ||||| |||||||||||||||||||
seq2  TTTTGCCGCTTATAGTTTCTACAGATGTGTCATGTTTGAAACTCTGGGAA  750

seq1  CTTT-TTAAATGGATATATAAATGCTAGAGGCAGGGTT-GGTGGTTG-GT  796
      ||||   | ||||||||||||||||||||||| ||||| ||||||||   
seq2  CTTTGACACATGGATATATAAATGCTAGAGGCCGGGTTCGGTGGTTGTAC  800

seq1  GGTCATTGGG  806
      ||||||||||
seq2  GGTCATTGGG  810