BAC Information

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BAC

Clone NameB6Ng01-250B08
Chromosome1 (Build37)
Map Location 68,848,678 - 69,034,470
singlet/doubletdoublet
Overlap geneErbb4
Upstream genenone
Downstream geneLOC667842, EG241084, Ikzf2, Spag16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250B08.bB6Ng01-250B08.g
ACCGA057727GA057728
length1,1321,209
definitionB6Ng01-250B08.b B6Ng01-250B08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,848,678 - 68,849,810)(69,033,253 - 69,034,470)
sequence
gaattcaaatgtttgattatgagaaacacattccttttaattgtcatcca
ccaaaacccaagaaattctgaaataaaagcagtttacatcttttatgtaa
acttaaaagttagaattagataaatgagaaacattaagctggaatgtgcc
tccagaggtcagttagcccatccttgcttccagcaagacttgaagacttc
atctaaagcatatgtctaactacctctgtgttatatttgctgagccatcc
tactctctgacgttctgaattaatgaagtattcttgtacaaactggttta
actgtcccagctaatttagctagtcaagagtgccagaaatctggctcagt
taacaagacatttcacatttaactcatccaaatggaatatgtcttcaatg
tagttagcatattttgaatctctttcactggtaaatacaattaatgactc
aacaaagtatctgtatgaagagagaactaaaatattagacttgtactaaa
tctgactaaattgtttcttacttgatcttactgaaaatttacacaatatt
cccatcctagagcaagagaatgtctagcatactgtgttcctaaatttaca
tatctcttaccctttggtaattctttatgaaaactaaattggtggtcaaa
aattataacaggcaccatttagcaaataaaaaaattatattgctctccaa
agaaaggttttttccactatttttaaaatcactactctcagaaattatta
tattggaatctatcatgaatattttattattaacacaattgacagcatgt
gaaaatgtgttcctccatttaaagtttagagaattatgctattatttctt
tatactgagttgtcattttgaactccaaaatatagaatcattgcagacaa
ataatgcccaaaaatatcaagataaaaattacaagtcagaatatgtctta
aatatttgaaaattaaaaattctaaaatacatgttctattgcttttttta
aatatgatataacaggagcagaggaaaagacatttaactgtctcagcttc
agctgaatttctaagaatcctcttcactgcagtagcagtgttgtaaaaat
aacaggcgcatacattgcaagcagattcaaac

gaattccatcatttatgcttctattaaataattattataatatcagacaa
ttataagcccatataatatctttctttcaaatgtctcctttaaagaaata
gtacatttttaaagatacaatcttgtcagtataattgaattaactatgtc
gtaaagaatactgtgcaataaaatattgctattggtttattattttaaag
agcctacaaagataagaactcactttctctgtcttttttggtctggagat
tggtgattattctaaagttaagaagttttatagaaacttatggtgtgtaa
caatgtcattaagtaaaattctaaatgcatattttgaatttggttccatc
ctagtataatttaaatcactacagttaccatattttctctaaataccata
ctcatcagaacaaaggaaatgcctgtttttggtgctatttgttgtcttga
agacaaataaaacttacgttttttgatagtcattcatcctaaaccgtgag
ctttatgctctaatctttcacaactattctacaatgtatgtttcttaaat
atctttatttagaattctgcattttgtagcacttacagatttatgattgg
cttaatttgagtttaaacccaatagtctaactttaaaatctgcaaactat
atgagttttagttaatttttaaaaagaacataaatttcaagaaaaaaatt
aaagagacagacacacacaggcagagaatgaaagaggcagagaggcagag
acagacacacctgcgcacatgtacacacacacacacacacacacacacac
acacagagagagagagagagagagagagagagagagagagagagagagag
agagagagagagagagagagagagattttcctggatttattacattttct
ttttaattgacaggcttccaataatctcccaaaagtataaaattgtctct
agcctcataagccacctggtggattgcatggaacatgctaaaggatatat
ggatgaaatatctgtgctttcaagactttctagactaatctttttcatct
atctctcgacactttaaatataggatttggcaggatattaagggttaatt
catacgagaacatgaaagagtcgaatggcataagaacaccaagtcactcc
ggttaaggcctgttctggatactgtgaacctccgaaggtaacacctcttc
acctggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_68848678_68849810
seq2: B6Ng01-250B08.b_45_1176

seq1  GAATTCAAATGTTTGATTATGAGAAACACATTCCTTTTAATTGTCATCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATGTTTGATTATGAGAAACACATTCCTTTTAATTGTCATCCA  50

seq1  CCAAAACCCAAGAAATTCTGAAATAAAAGCAGTTTACATCTTTTATGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACCCAAGAAATTCTGAAATAAAAGCAGTTTACATCTTTTATGTAA  100

seq1  ACTTAAAAGTTAGAATTAGATAAATGAGAAACATTAAGCTGGAATGTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAAAGTTAGAATTAGATAAATGAGAAACATTAAGCTGGAATGTGCC  150

seq1  TCCAGAGGTCAGTTAGCCCATCCTTGCTTCCAGCAAGACTTGAAGACTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGGTCAGTTAGCCCATCCTTGCTTCCAGCAAGACTTGAAGACTTC  200

seq1  ATCTAAAGCATATGTCTAACTACCTCTGTGTTATATTTGCTGAGCCATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAGCATATGTCTAACTACCTCTGTGTTATATTTGCTGAGCCATCC  250

seq1  TACTCTCTGACGTTCTGAATTAATGAAGTATTCTTGTACAAACTGGTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCTGACGTTCTGAATTAATGAAGTATTCTTGTACAAACTGGTTTA  300

seq1  ACTGTCCCAGCTAATTTAGCTAGTCAAGAGTGCCAGAAATCTGGCTCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCCCAGCTAATTTAGCTAGTCAAGAGTGCCAGAAATCTGGCTCAGT  350

seq1  TAACAAGACATTTCACATTTAACTCATCCAAATGGAATATGTCTTCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAGACATTTCACATTTAACTCATCCAAATGGAATATGTCTTCAATG  400

seq1  TAGTTAGCATATTTTGAATCTCTTTCACTGGTAAATACAATTAATGACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGCATATTTTGAATCTCTTTCACTGGTAAATACAATTAATGACTC  450

seq1  AACAAAGTATCTGTATGAAGAGAGAACTAAAATATTAGACTTGTACTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGTATCTGTATGAAGAGAGAACTAAAATATTAGACTTGTACTAAA  500

seq1  TCTGACTAAATTGTTTCTTACTTGATCTTACTGAAAATTTACACAATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTAAATTGTTTCTTACTTGATCTTACTGAAAATTTACACAATATT  550

seq1  CCCATCCTAGAGCAAGAGAATGTCTAGCATACTGTGTTCCTAAATTTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCCTAGAGCAAGAGAATGTCTAGCATACTGTGTTCCTAAATTTACA  600

seq1  TATCTCTTACCCTTTGGTAATTCTTTATGAAAACTAAATTGGTGGTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTTACCCTTTGGTAATTCTTTATGAAAACTAAATTGGTGGTCAAA  650

seq1  AATTATAACAGGCACCATTTAGCAAATAAAAAAATTATATTGCTCTCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAACAGGCACCATTTAGCAAATAAAAAAATTATATTGCTCTCCAA  700

seq1  AGAAAGGTTTTTTCCACTATTTTTAAAATCACTACTCTCAGAAATTATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGTTTTTTCCACTATTTTTAAAATCACTACTCTCAGAAATTATTA  750

seq1  TATTGGAATCTATCATGAATATTTTATTATTAACACAATTGACAGCATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGAATCTATCATGAATATTTTATTATTAACACAATTGACAGCATGT  800

seq1  GAAAATGTGTTCCTCCATTTAAAGTTTAGAGAATTATGCTATTATTTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGTGTTCCTCCATTTAAAGTTTAGAGAATTATGCTATTATTTCTT  850

seq1  TATACTGAGTTGTCATTTTGAACTCCAAAATATAGAATCATTGCAGACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGAGTTGTCATTTTGAACTCCAAAATATAGAATCATTGCAGACAA  900

seq1  ATAATGCCCAAAAATATCAAGATAAAAATTACAAGTCAGAATATGTCTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCCCAAAAATATCAAGATAAAAATTACAAGTCAGAATATGTCTTA  950

seq1  AATATTTGAAAATTAAAAATTCTAAAATACATGTTCTATTGCTTTTTTTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTGAAAATTAAAAATTCTAAAATACATGTTCTATTGCTTTTTTTA  1000

seq1  AAATAATGATAT-ACAGGAGCAGAGGAAAAGACATTTAACTGTCTCCAGC  1049
      ||   ||||||| |||||||||||||||||||||||||||||||| ||||
seq2  AA--TATGATATAACAGGAGCAGAGGAAAAGACATTTAACTGTCT-CAGC  1047

seq1  TTCAGCTGAATTTCTAAG-ATCTCCTTCACTGCCAGTAGCCAGTGTTGTA  1098
      |||||||||||||||||| |||  |||||||| |||||| ||||||||||
seq2  TTCAGCTGAATTTCTAAGAATCCTCTTCACTG-CAGTAG-CAGTGTTGTA  1095

seq1  AAA--TACA-GCGCATAACAATGCAAGCAGATTCAAAC  1133
      |||   ||| |||||| ||| |||||||||||||||||
seq2  AAAATAACAGGCGCAT-ACATTGCAAGCAGATTCAAAC  1132


seq1: chr1_69033253_69034470
seq2: B6Ng01-250B08.g_68_1275 (reverse)

seq1  CACCA-GTGAAGAGGTG-TACCTTTGAAGTTTTCACAGGTACTAAGAAAC  48
      ||||| ||||||||||| |||||| | ||  |||||| |||   || |||
seq2  CACCAGGTGAAGAGGTGTTACCTTCGGAG-GTTCACA-GTATCCAG-AAC  47

seq1  AGCCTTAAACAGGAGTGGACTTGGTG-TCTTATTGCATCTGACTTCTTTC  97
      || | | ||| ||||| ||||||||| ||||||  |||  ||| ||||||
seq2  AGGCCTTAACCGGAGT-GACTTGGTGTTCTTATGCCATTCGAC-TCTTTC  95

seq1  ATG-TCTCGTATGGAATTTAAACCTTTAAAATATCCTGCCAAAAATCCTA  146
      ||| |||||||||  | |||| ||||   |||||||||||  ||||||| 
seq2  ATGTTCTCGTATG--AATTAACCCTT---AATATCCTGCC--AAATCCT-  137

seq1  ATATTTAAAGTGTCGAGAAGAATAGATGAAAAAAGAATTAGTCTAGAAAG  196
      ||||||||||||||||||   ||||||||||||   ||||||||||||||
seq2  ATATTTAAAGTGTCGAGA--GATAGATGAAAAA--GATTAGTCTAGAAAG  183

seq1  TC-TGAAAGCACAGAATATGTCATCAATATAATCCTTTAGCATGTTCCAA  245
      || ||||||||||| |||| ||||| |||| ||||||||||||||||| |
seq2  TCTTGAAAGCACAG-ATATTTCATCCATAT-ATCCTTTAGCATGTTCC-A  230

seq1  TGCAATCCA-CAGGTGGCTTATGAGGCTAGAGACAATTTTATACTTTTGG  294
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATCCACCAGGTGGCTTATGAGGCTAGAGACAATTTTATACTTTTGG  280

seq1  GAGATTATTGGAAGCCTGTCAATTAAAAAGAAAATGTAATAAATCCAGGA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTATTGGAAGCCTGTCAATTAAAAAGAAAATGTAATAAATCCAGGA  330

seq1  A----TATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  390
      |    | |||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  380

seq1  CTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGT  430

seq1  GTGTGTACATGTGCGCAGGTGTGTCTGTCTCTGCCTCTCTGCCTCTTTCA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTACATGTGCGCAGGTGTGTCTGTCTCTGCCTCTCTGCCTCTTTCA  480

seq1  TTCTCTGCCTGTGTGTGTCTGTCTCTTTAATTTTTTTCTTGAAATTTATG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGCCTGTGTGTGTCTGTCTCTTTAATTTTTTTCTTGAAATTTATG  530

seq1  TTCTTTTTAAAAATTAACTAAAACTCATATAGTTTGCAGATTTTAAAGTT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTAAAAATTAACTAAAACTCATATAGTTTGCAGATTTTAAAGTT  580

seq1  AGACTATTGGGTTTAAACTCAAATTAAGCCAATCATAAATCTGTAAGTGC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATTGGGTTTAAACTCAAATTAAGCCAATCATAAATCTGTAAGTGC  630

seq1  TACAAAATGCAGAATTCTAAATAAAGATATTTAAGAAACATACATTGTAG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAATGCAGAATTCTAAATAAAGATATTTAAGAAACATACATTGTAG  680

seq1  AATAGTTGTGAAAGATTAGAGCATAAAGCTCACGGTTTAGGATGAATGAC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTGTGAAAGATTAGAGCATAAAGCTCACGGTTTAGGATGAATGAC  730

seq1  TATCAAAAAACGTAAGTTTTATTTGTCTTCAAGACAACAAATAGCACCAA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAAAACGTAAGTTTTATTTGTCTTCAAGACAACAAATAGCACCAA  780

seq1  AAACAGGCATTTCCTTTGTTCTGATGAGTATGGTATTTAGAGAAAATATG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGCATTTCCTTTGTTCTGATGAGTATGGTATTTAGAGAAAATATG  830

seq1  GTAACTGTAGTGATTTAAATTATACTAGGATGGAACCAAATTCAAAATAT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTGTAGTGATTTAAATTATACTAGGATGGAACCAAATTCAAAATAT  880

seq1  GCATTTAGAATTTTACTTAATGACATTGTTACACACCATAAGTTTCTATA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTAGAATTTTACTTAATGACATTGTTACACACCATAAGTTTCTATA  930

seq1  AAACTTCTTAACTTTAGAATAATCACCAATCTCCAGACCAAAAAAGACAG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCTTAACTTTAGAATAATCACCAATCTCCAGACCAAAAAAGACAG  980

seq1  AGAAAGTGAGTTCTTATCTTTGTAGGCTCTTTAAAATAATAAACCAATAG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTGAGTTCTTATCTTTGTAGGCTCTTTAAAATAATAAACCAATAG  1030

seq1  CAATATTTTATTGCACAGTATTCTTTACGACATAGTTAATTCAATTATAC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTTTATTGCACAGTATTCTTTACGACATAGTTAATTCAATTATAC  1080

seq1  TGACAAGATTGTATCTTTAAAAATGTACTATTTCTTTAAAGGAGACATTT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGATTGTATCTTTAAAAATGTACTATTTCTTTAAAGGAGACATTT  1130

seq1  GAAAGAAAGATATTATATGGGCTTATAATTGTCTGATATTATAATAATTA  1190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGATATTATATGGGCTTATAATTGTCTGATATTATAATAATTA  1180

seq1  TTTAATAGAAGCATAAATGATGGAATTC  1218
      ||||||||||||||||||||||||||||
seq2  TTTAATAGAAGCATAAATGATGGAATTC  1208


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