BAC Information

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BAC

Clone NameB6Ng01-250L21
Chromosome1 (Build37)
Map Location 103,951,262 - 103,952,341
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041909, LOC100040993, LOC383650
Downstream geneLOC100041056, LOC100041067
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250L21.bB6Ng01-250L21.g
ACCGA058204GA058205
length1,1841,076
definitionB6Ng01-250L21.b B6Ng01-250L21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtgcagctctgtgctccattttgtaatgtggttatttgatt
ttctggggtctatcttcttgagttctttatatatattggatattagtccc
ctgtctgatttagaattggtaaaaattctttcccaatctgttggttgcct
ttttgtcttattgacagagtcttttgccttacagaagctttgaaatttta
tgaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctattcagtaatttttcccctgtgcctatatctttgagacttttttccaa
tttttttcctctataagtttcattctgactggttttatgtggagttcctt
aatccacatagacttggccttagtataaggagataagaatggatcaattc
gcattttactacatgataaccgccagttgtgccagcaccatttgttgaaa
attctgtattttttccactggatggttttagctcccttgtcaaagatcaa
gtgaccatgggtgtgtggattcatttctgggtctacctgtctgtcactat
accagtacaatgcagttttttttcacaattgctctgtagtacagctttag
gtcaggcatggtgattccaccagagattcttttatcattgaaaagagttt
ttgctatcctaggtttattgttattccagatgaatctgccgattgccctt
tctaatacgttgaagaattgagttggaattttgatagggattgcattgaa
tctgtagattgctttcagcaagattgccatttttactatattgatcctgc
caatccatgagcatgggaaatctttccattttctgtgatcttctttgatt
tatttcttcagagtctcaaagtgcttgtcatacacatatttcactttctt
agttagaggcacaccaacgtattttatattatttgtgactattgtgaagg
gtgttttttccctaatttctttctcagcctgtttatcctttgtgtagaaa
aggcatgattgttgagtattttatattctagtatcactgagctgatatca
gtttaggagtttctggtggattttaagtcattattatatacatcatatca
ttctgcaaagtgattttgacttctttcttcatgattccttgaactccttg
tgtccaatgtcctcggatgaggaattccaagcac

gaattccttttccctgaattaggagttatccaccgaaaagagcctctacc
aatctgggttgtagacaaaatacttgcccaacataacaagagggcatttc
aggttctaccattcctggttgctgctgtaataaatataggtgctagagat
agaatggcagggctgaccacttccctaacttatacaataaattctcttct
cagcttgacaacagtcttcaagaagtaagccaaaccatgctcactatcac
aaaacagattgattctttggcagcagcagtgcttcagaatcaatgggctg
acagctaaaaaatatatttcttcaagaagaatgctgcttctacatcaatg
aatctgggatagagagaaccaaaacacagcagttaaaatcagacatccag
aaacgcatggaacaatgattatcatccactctccacagaggagcctaatg
tgaatgactatcaaatgacttccaatggtgaggatcagccacacctccaa
attgatgatgccaatagacagcaggaagcagtttaagagactggatctcc
ctattctcacctcaccatagccttccccctttttccctctttgtgataag
aaaaagtgagaaatgttagcatcagatgcatctgtggacaggcagaagtt
gtttacacccagcttccagaccaggttatgtcatctctaagccacagctc
tgctcctgcatccattgttatggcacccatcacagcacacctctctgctc
atgtgtcacctgcaacacatctccgacaaaaatacgtgtaccctgaccct
tagctctctctcttcttcccttctccctacacacccctctcccaccaaag
gtgcctctgttcataaagcctcccttgttaaacctgtgctggcttggtgt
gatttctcattgtgttcacttttattatattctaacatataatgaaacac
tgttttaaaattaatatcaacatccttctggaattcccatatatgtaaca
ttcatctgagtaatgtccctaaagaaccttttcgtctaggagacatgaag
atgaaagaaaaataaataaagtgtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_103951262_103952341
seq2: B6Ng01-250L21.g_70_1145 (reverse)

seq1  CTACACTTTTATTTA-TTTTCTTTCATCTTTCATGTCTTCTTAGACGAAA  49
      |||||| |||||||| |||||||||||| |||||||| || |||||||||
seq2  CTACAC-TTTATTTATTTTTCTTTCATC-TTCATGTC-TCCTAGACGAAA  47

seq1  A-GTTCTTTA-GGACATTACTTCAGAATTGAAATGTTACATATATGGGAA  97
      | |||||||| ||||||||| |||||  || |||||||||||||||||||
seq2  AGGTTCTTTAGGGACATTAC-TCAGA--TG-AATGTTACATATATGGGAA  93

seq1  TTCCAGAAGGATGTTGATATTAATTTTAAAACAGTGTTTCATTATATGTT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAAGGATGTTGATATTAATTTTAAAACAGTGTTTCATTATATGTT  143

seq1  AGAATATAATAAAAGTGAACACAATGAGAAATCACACCAAGCCAGCACAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATAATAAAAGTGAACACAATGAGAAATCACACCAAGCCAGCACAG  193

seq1  GTTTAACAAGGGAGGCTTTATGAACAGAGGCACCTTTGGTGGGAGAGGGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAACAAGGGAGGCTTTATGAACAGAGGCACCTTTGGTGGGAGAGGGG  243

seq1  TGTGTAGGGAGAAGGGAAGAAGAGAGAGAGCTAAGGGTCAGGGTACACGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGGGAGAAGGGAAGAAGAGAGAGAGCTAAGGGTCAGGGTACACGT  293

seq1  ATTTTTGTCGGAGATGTGTTGCAGGTGACACATGAGCAGAGAGGTGTGCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTCGGAGATGTGTTGCAGGTGACACATGAGCAGAGAGGTGTGCT  343

seq1  GTGATGGGTGCCATAACAATGGATGCAGGAGCAGAGCTGTGGCTTAGAGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGGTGCCATAACAATGGATGCAGGAGCAGAGCTGTGGCTTAGAGA  393

seq1  TGACATAACCTGGTCTGGAAGCTGGGTGTAAACAACTTCTGCCTGTCCAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATAACCTGGTCTGGAAGCTGGGTGTAAACAACTTCTGCCTGTCCAC  443

seq1  AGATGCATCTGATGCTAACATTTCTCACTTTTTCTTATCACAAAGAGGGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCATCTGATGCTAACATTTCTCACTTTTTCTTATCACAAAGAGGGA  493

seq1  AAAAGGGGGAAGGCTATGGTGAGGTGAGAATAGGGAGATCCAGTCTCTTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGGGAAGGCTATGGTGAGGTGAGAATAGGGAGATCCAGTCTCTTA  543

seq1  AACTGCTTCCTGCTGTCTATTGGCATCATCAATTTGGAGGTGTGGCTGAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTTCCTGCTGTCTATTGGCATCATCAATTTGGAGGTGTGGCTGAT  593

seq1  CCTCACCATTGGAAGTCATTTGATAGTCATTCACATTAGGCTCCTCTGTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCATTGGAAGTCATTTGATAGTCATTCACATTAGGCTCCTCTGTG  643

seq1  GAGAGTGGATGATAATCATTGTTCCATGCGTTTCTGGATGTCTGATTTTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTGGATGATAATCATTGTTCCATGCGTTTCTGGATGTCTGATTTTA  693

seq1  ACTGCTGTGTTTTGGTTCTCTCTATCCCAGATTCATTGATGTAGAAGCAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGTGTTTTGGTTCTCTCTATCCCAGATTCATTGATGTAGAAGCAG  743

seq1  CATTCTTCTTGAAGAAATATATTTTTTAGCTGTCAGCCCATTGATTCTGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTCTTGAAGAAATATATTTTTTAGCTGTCAGCCCATTGATTCTGA  793

seq1  AGCACTGCTGCTGCCAAAGAATCAATCTGTTTTGTGATAGTGAGCATGGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGCTGCTGCCAAAGAATCAATCTGTTTTGTGATAGTGAGCATGGT  843

seq1  TTGGCTTACTTCTTGAAGACTGTTGTCAAGCTGAGAAGAGAATTTATTGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTACTTCTTGAAGACTGTTGTCAAGCTGAGAAGAGAATTTATTGT  893

seq1  ATAAGTTAGGGAAGTGGTCAGCCCTGCCATTCTATCTCTAGCACCTATAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTTAGGGAAGTGGTCAGCCCTGCCATTCTATCTCTAGCACCTATAT  943

seq1  TTATTACAGCAGCAACCAGGAATGGTAGAACCTGAAATGCCCTCTTGTTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACAGCAGCAACCAGGAATGGTAGAACCTGAAATGCCCTCTTGTTA  993

seq1  TGTTGGGCAAGTATTTTGTCTACAACCCAGATTGGTAGAGGCTCTTTTCG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGCAAGTATTTTGTCTACAACCCAGATTGGTAGAGGCTCTTTTCG  1043

seq1  GTGGATAACTCCTAATTCAGGGAAAAGGAATTC  1080
      |||||||||||||||||||||||||||||||||
seq2  GTGGATAACTCCTAATTCAGGGAAAAGGAATTC  1076


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