BAC Information

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BAC

Clone NameB6Ng01-250M15
Chromosome1 (Build37)
Map Location 159,040,992 - 159,041,591
singlet/doubletsinglet
Overlap genenone
Upstream geneTdrd5, Nphs2, 9430070O13Rik, LOC100038991, Soat1, LOC100039026, Abl2, Tor3a, C530043G21Rik, LOC433368, Ralgps2, Angptl1, 4930439D14Rik, 1700057K13Rik
Downstream geneRasal2, Gabarapl2-ps1_1522.1, 2810025M15Rik, BC026585, Lztr2, LOC664935, LOC100039217
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250M15.bB6Ng01-250M15.g
ACCGA058236GA058237
length1,217979
definitionB6Ng01-250M15.b B6Ng01-250M15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaaggtagtgacttttatttctcttacctatttagtttgtgcca
tgtgtcttgtttccatggtttctgaaaagatgtatttcttttcctttttt
agatttttttttttttttttttttttggtttaaaatatgcctactttggg
gcttgggagatggctcagggctaagagctctcattgtttttgcagaaggc
ccaggttttattcacagcacctacaaggtggctcaccaccatctatatct
caagttcagtagggtccaacacccttttctaaactgtggtagcattcatg
tggtacacatacatgcattcacacaaacactcatacaaataaaaataaag
cttaaaaatacatataagtgtaattttgaggcctttagtttgtttggggt
atttctgctgcttgccctgtgatcttgcttgagtatctgatattaatttg
agaaatatccagttatttcataggtttcttctgtttggggtgttttggtt
tattttgggtttttttctctcagtattccactgtgcttatgttaacttct
catgagcttcatggtccttgcctattctgttttggttttgttagtctttg
ctctacttgatcctagctttagaggtttctctgtgcttagagatcgttcc
tcagccatttcaactcttctaataaggagatagatagatagataatgaat
tctatatcaaattacaaactcctttatggcagaatttgcatttattttct
ctttatttttcttaaaacttttaaataagaaataaacaaagtaaatttta
ttaaataaatattgcagtaaagtagtgtggtgaaataaatgccaataaaa
ggtaaaattcaaaggctagaaaaataaacatctactaggatactttttag
tcaactgcataactatatttttatagaagtatattagtatttagtgaagt
cctaggcctgaatctcatccagccctacagtccatctagaattatgtcat
tagtcttgctgctgaatacattttcttgagcccattgagaatgcttctca
cacacgtggtcacaacccaagggttacgagatattctggctaccattatt
cattacgtctaacctttgacaatggagagcatgatggatttgatcggcct
accaaacgacatgctgcatatgccaggttgaacctatatagctgaaagtg
ctgtacgtagagtcgtc
gaattcccatttgtcgaggacataacaaaagtgagtggcaccacagacat
tttggaccaggctttaagggactgtctcatgtggtgttcactgaagatgc
ttggtgggaaggttccatggtttgtcctggtatctaccctacttatcctt
cacagtcacactcacatctgtcctggggctggaacttgagaggccacagc
tgactaccaaaggagattgggaaatgtggccacgcttctcctaagaaaga
ggaaagaaaccaagtgtagtggttcatgtctataatcccatcacttggca
agtggacacaaagattgtcacaagttcaatgcccaactggaacataaggc
aaaatccactcttcaagggaggagagaggcttttaagactaaagacactg
ggctggcgagatggcgcagcaggtaagaacactgactgctcttctgaaag
tcctaaattcaaatcccagcaactacatggtggctcacaaccacttgtaa
tgagatctgatgaccctttctggtgcatctgaagataactacagtgtact
tatttataataataaataaatctttgggctgaagtgagcagaggtcctaa
atttaattcccaacaaccacatgaaggcccacaaccatctgtacagctac
agtgtactcatatacataataaataaagattattatatttaaaaaaagac
taaagacactaaatctggagagagagcagtttgaagcacttgttgctctt
agaagaccctggttcaattcccagtacctacatggtggctcacaaccacc
tataacttcattcgttcttagggtactctcttctggcctctcggggtgtg
ggcatgcatgtggtactcagatctgcatgcaggcaaaaaaaaaaaaatat
atgtatatatatatatacatataaataattttatttattataaacatttt
atatattaatttttatatatttaaatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_159040992_159041591
seq2: B6Ng01-250M15.g_67_666

seq1  GAATTCCCATTTGTCGAGGACATAACAAAAGTGAGTGGCACCACAGACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATTTGTCGAGGACATAACAAAAGTGAGTGGCACCACAGACAT  50

seq1  TTTGGACCAGGCTTTAAGGGACTGTCTCATGTGGTGTTCACTGAAGATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGACCAGGCTTTAAGGGACTGTCTCATGTGGTGTTCACTGAAGATGC  100

seq1  TTGGTGGGAAGGTTCCATGGTTTGTCCTGGTATCTACCCTACTTATCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGGAAGGTTCCATGGTTTGTCCTGGTATCTACCCTACTTATCCTT  150

seq1  CACAGTCACACTCACATCTGTCCTGGGGCTGGAACTTGAGAGGCCACAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCACACTCACATCTGTCCTGGGGCTGGAACTTGAGAGGCCACAGC  200

seq1  TGACTACCAAAGGAGATTGGGAAATGTGGCCACGCTTCTCCTAAGAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTACCAAAGGAGATTGGGAAATGTGGCCACGCTTCTCCTAAGAAAGA  250

seq1  GGAAAGAAACCAAGTGTAGTGGTTCATGTCTATAATCCCATCACTTGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAAACCAAGTGTAGTGGTTCATGTCTATAATCCCATCACTTGGCA  300

seq1  AGTGGACACAAAGATTGTCACAAGTTCAATGCCCAACTGGAACATAAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGACACAAAGATTGTCACAAGTTCAATGCCCAACTGGAACATAAGGC  350

seq1  AAAATCCACTCTTCAAGGGAGGAGAGAGGCTTTTAAGACTAAAGACACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCACTCTTCAAGGGAGGAGAGAGGCTTTTAAGACTAAAGACACTG  400

seq1  GGCTGGCGAGATGGCGCAGCAGGTAAGAACACTGACTGCTCTTCTGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCGAGATGGCGCAGCAGGTAAGAACACTGACTGCTCTTCTGAAAG  450

seq1  TCCTAAATTCAAATCCCAGCAACTACATGGTGGCTCACAACCACTTGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAATTCAAATCCCAGCAACTACATGGTGGCTCACAACCACTTGTAA  500

seq1  TGAGATCTGATGACCCTTTCTGGTGCATCTGAAGATAACTACAGTGTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCTGATGACCCTTTCTGGTGCATCTGAAGATAACTACAGTGTACT  550

seq1  TATTTATAATAATAAATAAATCTTTGGGCTGAAGTGAGCAGAGGTCCTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATAATAATAAATAAATCTTTGGGCTGAAGTGAGCAGAGGTCCTAA  600