BAC Information

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BAC

Clone NameB6Ng01-250O18
Chromosome1 (Build37)
Map Location 37,981,252 - 37,982,372
singlet/doubletsinglet
Overlap genenone
Upstream geneTmem131, EG241053, A230074B11Rik, 4921511C04Rik, Cnga3, Inpp4a, 6330578E17Rik, Unc50, Mgat4a, 2010300C02Rik, Tsga10, EG623661, Mitd1, Mrpl30, Gm776
Downstream gene2300002O18Rik, Txndc9, EG666434, Eif5b, Rev1, EG329123, Aff3, Lonrf2, Chst10, EG625775
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250O18.bB6Ng01-250O18.g
ACCGA058331GA058332
length1,148987
definitionB6Ng01-250O18.b B6Ng01-250O18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggaagatgctcttggtccagggaagccctataatggctacagt
taccaggttggtagggtcagacttagccaaactttacagaacaaacagga
tttcttaaagttctagcgaatctgaaagcaacgtttcttttcgttagcta
aatgaagtgtttgcaggatacttgagaattacaatgactatgttttaata
ttttaatatttgctacaaagtttcttctttttttggtcttttttcctcct
gtttctttccttcttccttacacctcaataatatattaagaaatactact
tctctcttatttttcagtcccacacaaaggttcagtgtatgaaagtattt
gctacctggtgaggcaaatctgaggaccaagatttgatctctgagatccg
gatgaggggggatgaagagaagtccacaaaactgtcctctgacctccact
gtttgccgtggctcacatggccacccccacagaccagaaataaaatgtct
aaaaggaatattattttaaaattagaaaaaaaaagctgataatgcagtgt
catgggatcaaaagacatcagcagggagttcagagaaggtggaagttcac
acatttgatggtgatgatgatgatggtgatgacgataatggtgatgatga
tatgccctggggctggagagatgtcttgggagttaggagcacttagcttc
tcttgcacaggactgggtttaggttcccagcatccacagggcagcttaca
accatctataacttccaggttcagggcacccaaagccctctactggcttc
tctgtgcatgaggcacacacatgtgatacacaagcatacatgcagacaaa
acactaaataaaaataattcttttaaaaagaaagatacctcaacctccag
ttagtaaaatggagacatttcccagtttatgtctgctaaaagaaaacttt
tggtgaagatgtagaaagacacctccttggtgtttcttttttgggccatg
aaaaaaaccatttttatgataattccttgtattagccaaaatgccatatg
caatatgacttaagtgttgtgttcttgtatataccatacacttaacattt
aaaccatcctagtacctatttaaatactttcccttaaacacaagagtt
gaattcctttggccaatactttcagatgacagtctgttactgagagaagt
cagagagaaaccatggaggaatgctgctgactggctctctcctgcttggg
ttcaaccaagctttctttctttctttcttttttttttccttttttaaaaa
ttaggtattttcttcatttacatttcaaatgctatcccaaaagtccccca
gaaccttcccccaactcccctctccccccctactcccacttcttggccct
ggtgttcccccttactaaggcatataaagtttgcaacaccaaggtgcctc
tcttcccaatgatggccaactaggccatcttctgatacatatgcagctag
agacacgagctccggggggttctggttagttcatattgttgttccaccta
tagggttgcagacctctttagctccttgggtactttctctagctcctcca
ttggggtccctgtgttccatccaatagctgactgtgagcatccacttctg
tgttttccaggccccggcatagcctcacaagagacagctatatcagggtc
ctttcagcaaaatcttgctagtgtatgcaatgctgtcagcgtttggagtc
tgattatgggatggatccccgggtgtggcagtctctagatggtccatcct
tttcgtctcagctccaaactttgtctctgtaactccttccatgggtgttt
gttcccaattctaagaaggggcaaagtgtccacactttggtcttcgttct
tcttgagtttcatgtgttttgcaaattgtatcttatatcttgggtattct
aagtttctgggctaatatccacttagtaagtacatatcatgtgagttctt
ttgtgattgggttacctcactcaggatgatgccctccaggtccatccatt
tgcctaggaatttcataaatcatttttttttaatagctgagtagtacctc
cattggtggtaaatgcaccacatttttcttgtattcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_37981252_37982372
seq2: B6Ng01-250O18.b_47_1194 (reverse)

seq1  AACTCTT-TGTTTAAGG--AAGTTATTAAATA-GTACTA-GATGTTTTAA  45
      ||||||| |||||||||  ||||  ||||||| |||||| |||| |||||
seq2  AACTCTTGTGTTTAAGGGAAAGTATTTAAATAGGTACTAGGATGGTTTAA  50

seq1  ATGTTAAGTGTAT-GTATATACA--GACAC-ACAC-TAAGTCATATTGCA  90
      ||||||||||||| |||||||||   |||| |||| ||||||||||||||
seq2  ATGTTAAGTGTATGGTATATACAAGAACACAACACTTAAGTCATATTGCA  100

seq1  TATTGCATTTT-GCT-ATACAAG--ATTATCATAAAATTG--TTTTTTCA  134
      ||| ||||||| ||| |||||||  |||||||||||| ||  ||||||||
seq2  TATGGCATTTTGGCTAATACAAGGAATTATCATAAAAATGGTTTTTTTCA  150

seq1  TGG-CCAAAAAAG-AACACC-AGGA-GTGTCTTTCTACATCTTCACC-AA  179
      ||| ||||||||| |||||| |||| ||||||||||||||||||||| ||
seq2  TGGCCCAAAAAAGAAACACCAAGGAGGTGTCTTTCTACATCTTCACCAAA  200

seq1  AGTTTTCTTTTAGCAGACATAAACTGGGAAATGTCT-CATTTTACTAACT  228
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGTTTTCTTTTAGCAGACATAAACTGGGAAATGTCTCCATTTTACTAACT  250

seq1  -GAGGTTG-GGTATCTTTCTTTTT-AAAGAATTATTTT--ATTAGTGTTT  273
       ||||||| ||||||||||||||| |||||||||||||   |||||||||
seq2  GGAGGTTGAGGTATCTTTCTTTTTAAAAGAATTATTTTTATTTAGTGTTT  300

seq1  TGTCTGCATGTATGCTTGTGTATCACATGTGTGTGCCTCATGCACAGAGA  323
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCATGTATGCTTGTGTATCACATGTGTGTGCCTCATGCACAGAGA  350

seq1  AGCCAGTAGAGGGCTTTGGGTGCCCTGAACCTGGAAGTTATAGATGGTTG  373
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTAGAGGGCTTTGGGTGCCCTGAACCTGGAAGTTATAGATGGTTG  400

seq1  TAAGCTGCCCTGTGGATGCTGGGAACCTAAACCCAGTCCTGTGCAAGAGA  423
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGCCCTGTGGATGCTGGGAACCTAAACCCAGTCCTGTGCAAGAGA  450

seq1  AGCTAAGTGCTCCTAACTCCCAAGACATCTCTCCAGCCCCAGGGCATATC  473
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGTGCTCCTAACTCCCAAGACATCTCTCCAGCCCCAGGGCATATC  500

seq1  ATCATCACCATTATCGTCATCACCATCATCATCATCACCATCAAATGTGT  523
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCACCATTATCGTCATCACCATCATCATCATCACCATCAAATGTGT  550

seq1  GAACTTCCACCTTCTCTGAACTCCCTGCTGATGTCTTTTGATCCCATGAC  573
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCCACCTTCTCTGAACTCCCTGCTGATGTCTTTTGATCCCATGAC  600

seq1  ACTGCATTATCAGCTTTTTTTTTCTAATTTTAAAATAATATTCCTTTTAG  623
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATTATCAGCTTTTTTTTTCTAATTTTAAAATAATATTCCTTTTAG  650

seq1  ACATTTTATTTCTGGTCTGTGGGGGTGGCCATGTGAGCCACGGCAAACAG  673
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTATTTCTGGTCTGTGGGGGTGGCCATGTGAGCCACGGCAAACAG  700

seq1  TGGAGGTCAGAGGACAGTTTTGTGGACTTCTCTTCATCCCCCCTCATCCG  723
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTCAGAGGACAGTTTTGTGGACTTCTCTTCATCCCCCCTCATCCG  750

seq1  GATCTCAGAGATCAAATCTTGGTCCTCAGATTTGCCTCACCAGGTAGCAA  773
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCAGAGATCAAATCTTGGTCCTCAGATTTGCCTCACCAGGTAGCAA  800

seq1  ATACTTTCATACACTGAACCTTTGTGTGGGACTGAAAAATAAGAGAGAAG  823
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTCATACACTGAACCTTTGTGTGGGACTGAAAAATAAGAGAGAAG  850

seq1  TAGTATTTCTTAATATATTATTGAGGTGTAAGGAAGAAGGAAAGAAACAG  873
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTTCTTAATATATTATTGAGGTGTAAGGAAGAAGGAAAGAAACAG  900

seq1  GAGGAAAAAAGACCAAAAAAAGAAGAAACTTTGTAGCAAATATTAAAATA  923
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAAAAGACCAAAAAAAGAAGAAACTTTGTAGCAAATATTAAAATA  950

seq1  TTAAAACATAGTCATTGTAATTCTCAAGTATCCTGCAAACACTTCATTTA  973
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACATAGTCATTGTAATTCTCAAGTATCCTGCAAACACTTCATTTA  1000

seq1  GCTAACGAAAAGAAACGTTGCTTTCAGATTCGCTAGAACTTTAAGAAATC  1023
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACGAAAAGAAACGTTGCTTTCAGATTCGCTAGAACTTTAAGAAATC  1050

seq1  CTGTTTGTTCTGTAAAGTTTGGCTAAGTCTGACCCTACCAACCTGGTAAC  1073
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGTTCTGTAAAGTTTGGCTAAGTCTGACCCTACCAACCTGGTAAC  1100

seq1  TGTAGCCATTATAGGGCTTCCCTGGACCAAGAGCATCTTCCTGAATTC  1121
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCATTATAGGGCTTCCCTGGACCAAGAGCATCTTCCTGAATTC  1148