BAC Information

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BAC

Clone NameB6Ng01-251A03
Chromosome1 (Build37)
Map Location 139,282,332 - 139,414,326
singlet/doubletdoublet
Overlap genenone
Upstream gene9230116N13Rik, Ddx59, Kif14, Zfp281, LOC667686, EG623818, Nr5a2, Rnu7-ps3, LOC100042567
Downstream geneLOC100043143, Ptprc, LOC100042596, Atp6v1g3, LOC100042600, Nek7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251A03.bB6Ng01-251A03.g
ACCGA058391GA058392
length469607
definitionB6Ng01-251A03.b B6Ng01-251A03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(139,413,848 - 139,414,326)(139,282,332 - 139,282,938)
sequence
aagtcagaagttgtaaggacaggtgaaaagagtcttgtaacagttacaaa
atttatttcattagtttatattccctcatttattgaaaataatttttctc
ataaatcttgattagagtttcccctccttttatttcccccagttcctccc
taactcccctcccgtccagatccacccactttctatctctcattaggata
taaacaggcttctaagggtagtaaaaaataagattaaaaaaagaaaaacc
taacacactgaactagaaaccataatatgtatataaaagtcttgtagggt
aaaaagggagaatagatagatagatagatagatagatagatagatagata
gatagatagatgatagatcaagttaatgtatattaaaaactaagacaaaa
ttttctaaaagaaagaaaatgtcctgataccaaaaagatgttattgggat
tgttgtctgctggccatcg
gaattcctttgtcaattttcatgaaaggtgttggcctgttgcttcctttt
tgtatctttgtctggatttgttatttggcaatgctggctgcatatactaa
ggtaaggaccagccataactactctcactgtagttcagaagtgcccttct
tctgttgtttcctttttcttaggtcataaagtttgcagctataggagaat
acttctagaaaacatgcatctaggaaatatacagaaagagaaaattcttt
ttctccactctaccagcacccgactaatacagatgcagatgctcacagca
agcattggactgagcatggggacccaatggagaggttagggaaagggctg
aaggagctgaaggggatcgccatcccataggaagaacaacaatactaact
aaccagacccccccagagctcccagtgactaaaccaccaaccaaagagta
cacatggagggacccatggctccaaccgcatatgtagcagaggatggctt
tatctggcaacaatgggagcagagacccttggttctgtggaagctccatg
cctcactgtaagagaaatgctagggtggtgaggtggcaataggggtgggt
aagtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_139413848_139414326
seq2: B6Ng01-251A03.b_46_520 (reverse)

seq1  CGATGGCCAGCAGACAACAAACCCAATGGCATCTTTTTGGTATCAGGACA  50
      |||||||||||||||||||| ||||||  |||||||||||||||||||||
seq2  CGATGGCCAGCAGACAACAATCCCAATAACATCTTTTTGGTATCAGGACA  50

seq1  TTTTCTTTCTTTTTGAAAATTTTGTCTTAGTTTTTAATATACATTAACTT  100
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCTTTTAGAAAATTTTGTCTTAGTTTTTAATATACATTAACTT  100

seq1  GATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT  150
      ||||||||    ||||||||||||||||||||||||||||||||||||||
seq2  GATCTATC----ATCTATCTATCTATCTATCTATCTATCTATCTATCTAT  146

seq1  CTATCTATCTATTCTCCCTTTTTACCCTACAAGACTTTTATATACATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTATCTATTCTCCCTTTTTACCCTACAAGACTTTTATATACATATT  196

seq1  ATGGTTTCTAGTTCAGTGTGTTAGGTTTTTCTTTTTTTAATCTTATTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTCTAGTTCAGTGTGTTAGGTTTTTCTTTTTTTAATCTTATTTTT  246

seq1  TACTACCCTTAGAAGCCTGTTTATATCCTAATGAGAGATAGAAAGTGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACCCTTAGAAGCCTGTTTATATCCTAATGAGAGATAGAAAGTGGGT  296

seq1  GGATCTGGACGGGAGGGGAGTTAGGGAGGAACTGGGGGAAATAAAAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTGGACGGGAGGGGAGTTAGGGAGGAACTGGGGGAAATAAAAGGAG  346

seq1  GGGAAACTCTAATCAAGATTTATGAGAAAAATTATTTTCAATAAATGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAACTCTAATCAAGATTTATGAGAAAAATTATTTTCAATAAATGAGG  396

seq1  GAATATAAACTAATGAAATAAATTTTGTAACTGTTACAAGACTCTTTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATAAACTAATGAAATAAATTTTGTAACTGTTACAAGACTCTTTTCA  446

seq1  CCTGTCCTTACAACTTCTGACTTGAATTC  479
      |||||||||||||||||||||||||||||
seq2  CCTGTCCTTACAACTTCTGACTTGAATTC  475

seq1: chr1_139282332_139282938
seq2: B6Ng01-251A03.g_66_672

seq1  GAATTCCTTTGTCAATTTTCATGAAAGGTGTTGGCCTGTTGCTTCCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGTCAATTTTCATGAAAGGTGTTGGCCTGTTGCTTCCTTTT  50

seq1  TGTATCTTTGTCTGGATTTGTTATTTGGCAATGCTGGCTGCATATACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTTTGTCTGGATTTGTTATTTGGCAATGCTGGCTGCATATACTAA  100

seq1  GGTAAGGACCAGCCATAACTACTCTCACTGTAGTTCAGAAGTGCCCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGGACCAGCCATAACTACTCTCACTGTAGTTCAGAAGTGCCCTTCT  150

seq1  TCTGTTGTTTCCTTTTTCTTAGGTCATAAAGTTTGCAGCTATAGGAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGTTTCCTTTTTCTTAGGTCATAAAGTTTGCAGCTATAGGAGAAT  200

seq1  ACTTCTAGAAAACATGCATCTAGGAAATATACAGAAAGAGAAAATTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTAGAAAACATGCATCTAGGAAATATACAGAAAGAGAAAATTCTTT  250

seq1  TTCTCCACTCTACCAGCACCCGACTAATACAGATGCAGATGCTCACAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCACTCTACCAGCACCCGACTAATACAGATGCAGATGCTCACAGCA  300

seq1  AGCATTGGACTGAGCATGGGGACCCAATGGAGAGGTTAGGGAAAGGGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGGACTGAGCATGGGGACCCAATGGAGAGGTTAGGGAAAGGGCTG  350

seq1  AAGGAGCTGAAGGGGATCGCCATCCCATAGGAAGAACAACAATACTAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGCTGAAGGGGATCGCCATCCCATAGGAAGAACAACAATACTAACT  400

seq1  AACCAGACCCCCCCAGAGCTCCCAGTGACTAAACCACCAACCAAAGAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGACCCCCCCAGAGCTCCCAGTGACTAAACCACCAACCAAAGAGTA  450

seq1  CACATGGAGGGACCCATGGCTCCAACCGCATATGTAGCAGAGGATGGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGAGGGACCCATGGCTCCAACCGCATATGTAGCAGAGGATGGCTT  500

seq1  TATCTGGCAACAATGGGAGCAGAGACCCTTGGTTCTGTGGAAGCTCCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGCAACAATGGGAGCAGAGACCCTTGGTTCTGTGGAAGCTCCATG  550

seq1  CCTCACTGTAAGAGAAATGCTAGGGTGGTGAGGTGGCAATAGGGGTGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTGTAAGAGAAATGCTAGGGTGGTGAGGTGGCAATAGGGGTGGGT  600

seq1  AAGTGGG  607
      |||||||
seq2  AAGTGGG  607