MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-251M24
Chromosome	1 (Build37)
Map Location	13,575,152 - 13,575,330
singlet/doublet	singlet
Overlap gene	Tram1
Upstream gene	LOC621353, LOC100039733, Sulf1, Slco5a1, LOC383490, Prdm14, Ncoa2, LOC665341, LOC100039812, EG621685
Downstream gene	Lactb2, Xkr9, LOC100039843, EG433273, LOC100039859, LOC100039869, Eya1, LOC665391
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC621353 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621353
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC100039733 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039733
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Sulf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240725 MGI:2138563
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slco5a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240726 MGI:2443431
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383490 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383490
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins pseudo : _no_value

name	Prdm14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:383491 MGI:3588194
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ncoa2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17978 MGI:1276533
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC665341 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665341
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100039812 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039812
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG621685 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621685 MGI:3647915
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Tram1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72265 MGI:1919515
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lactb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212442 MGI:2442551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Xkr9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381246 MGI:2686466
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039843 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039843
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	EG433273 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433273 MGI:3649089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 131 ESTs, 16 Proteins

name	LOC100039859 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039859
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins

name	LOC100039869 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039869
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Eya1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14048 MGI:109344
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665391 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665391
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100039733 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233607 GeneID:100039733
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to DNA-directed RNA polymerase II largest subunit transcript_id : XM_001473399.1

name	Sulf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:26986616 GeneID:240725 MGI:2138563
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sulfatase 1 transcript_id : NM_172294.1

name	Slco5a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124378010 GeneID:240726 MGI:2443431
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier organic anion transporter family, member 5A1 transcript_id : NM_172841.2

name	Prdm14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487082 GeneID:383491 MGI:3588194
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PR domain containing 14 transcript_id : NM_001081209.1

name	Ncoa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118026943 GeneID:17978 MGI:1276533
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor coactivator 2 transcript_id : NM_001077695.1

name	Ncoa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118026939 GeneID:17978 MGI:1276533
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor coactivator 2 transcript_id : NM_008678.2

name	EG621685 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233610 GeneID:621685 MGI:3647915
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG621685 transcript_id : XM_886085.3

name	Tram1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802711 GeneID:72265 MGI:1919515
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocating chain-associating membrane protein 1 transcript_id : NM_028173.2

name	Lactb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130117 GeneID:212442 MGI:2442551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lactamase, beta 2 transcript_id : NM_145381.2

name	Xkr9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131129 GeneID:381246 MGI:2686466
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : X Kell blood group precursor related family member 9 homolog transcript_id : NM_001011873.2

name	LOC100039859 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233612 GeneID:100039859
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins product : hypothetical protein LOC100039859 transcript_id : XM_001473671.1

name	Eya1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84579836 GeneID:14048 MGI:109344
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eyes absent 1 homolog (Drosophila) transcript_id : NM_010164.2

name	LOC100039733 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233608 GeneID:100039733
definition	codon_start : 1 product : similar to DNA-directed RNA polymerase II largest subunit protein_id : XP_001473449.1

name	Sulf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26986617 CCDS:CCDS14820.1 GeneID:240725 MGI:2138563
definition	GO_component : GO:0009986 - cell surface [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005615 - extracellular space [Evidence ISS] GO_function : GO:0004065 - arylsulfatase activity [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008449 - N-acetylglucosamine-6-sulfatase activity [Evidence ISS]; GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0030201 - heparan sulfate proteoglycan metabolism [Evidence ISS]; GO:0008152 - metabolism [Evidence IEA]; GO:0006790 - sulfur metabolism [Evidence ISS] codon_start : 1 note : extracellular sulfatase SULF-1 product : sulfatase 1 protein_id : NP_758498.1

name	Slco5a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124378011 CCDS:CCDS14821.1 GeneID:240726 MGI:2443431
definition	codon_start : 1 product : solute carrier organic anion transporter family, member 5A1 protein_id : NP_766429.2

name	Prdm14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487083 GeneID:383491 MGI:3588194
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] codon_start : 1 product : PR domain containing 14 protein_id : NP_001074678.1

name	Ncoa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118026944 GeneID:17978 MGI:1276533
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0030374 - ligand-dependent nuclear receptor transcription coactivator activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence IDA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0030375 - thyroid hormone receptor coactivator activity [Evidence IDA]; GO:0003713 - transcription coactivator activity [Evidence IGI] [Evidence IDA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; glucocorticoid receptor interacting protein 1; transcriptional intermediary factor 2; TIF2/GRIP-1; glucocorticoid receptor-interacting protein 1 product : nuclear receptor coactivator 2 isoform b protein_id : NP_001071163.1

name	Ncoa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118026940 GeneID:17978 MGI:1276533
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0030374 - ligand-dependent nuclear receptor transcription coactivator activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence IDA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0030375 - thyroid hormone receptor coactivator activity [Evidence IDA]; GO:0003713 - transcription coactivator activity [Evidence IGI] [Evidence IDA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; glucocorticoid receptor interacting protein 1; transcriptional intermediary factor 2; TIF2/GRIP-1; glucocorticoid receptor-interacting protein 1 product : nuclear receptor coactivator 2 isoform a protein_id : NP_032704.2

name	EG621685 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233611 GeneID:621685 MGI:3647915
definition	codon_start : 1 product : similar to ribosomal protein protein_id : XP_891178.3

name	Tram1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794386 CCDS:CCDS14822.1 GeneID:72265 MGI:1919515
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : translocating chain-associating membrane protein 1 protein_id : NP_082449.1

name	Lactb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703764 CCDS:CCDS14823.1 GeneID:212442 MGI:2442551
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 product : lactamase, beta 2 protein_id : NP_663356.1

name	Xkr9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:59676597 CCDS:CCDS14824.1 GeneID:381246 MGI:2686466
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : XK-related protein 9 protein_id : NP_001011873.1

name	LOC100039859 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233613 GeneID:100039859
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473721.1

name	Eya1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84579837 GeneID:14048 MGI:109344
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IDA] GO_process : GO:0045165 - cell fate commitment [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0008152 - metabolism [Evidence IEA]; GO:0001656 - metanephros development [Evidence IMP]; GO:0043066 - negative regulation of apoptosis [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0006470 - protein amino acid dephosphorylation [Evidence IDA]; GO:0045664 - regulation of neuron differentiation [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0001657 - ureteric bud development [Evidence IGI] codon_start : 1 product : eyes absent 1 protein_id : NP_034294.2

name	LOC621353 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621353
definition	number : 1 pseudo : _no_value

name	LOC665341 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665341
definition	number : 1 pseudo : _no_value

name	LOC100039812 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039812
definition	number : 1 pseudo : _no_value

name	LOC100039843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039843
definition	number : 7 pseudo : _no_value

name	LOC100039843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039843
definition	number : 6 pseudo : _no_value

name	LOC100039843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039843
definition	number : 5 pseudo : _no_value

name	LOC100039843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039843
definition	number : 4 pseudo : _no_value

name	LOC100039843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039843
definition	number : 3 pseudo : _no_value

name	LOC100039843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039843
definition	number : 2 pseudo : _no_value

name	LOC100039843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039843
definition	number : 1 pseudo : _no_value

name	LOC100039869 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039869
definition	number : 2 pseudo : _no_value

name	LOC100039869 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039869
definition	number : 1 pseudo : _no_value

name	LOC665391 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665391
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128625
definition	standard_name : D1Mit275

name	(CDS detail)
type	STS
link
xref	UniSTS:116247
definition	standard_name : D1Mit64

name	(CDS detail)
type	STS
link
xref	UniSTS:178358
definition	standard_name : AW121680

name	(CDS detail)
type	STS
link
xref	UniSTS:234071
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:165065
definition	standard_name : AI467640

name	(CDS detail)
type	STS
link
xref	UniSTS:161393
definition	standard_name : RH124571

name	(CDS detail)
type	STS
link
xref	UniSTS:162969
definition	standard_name : RH126261

name	(CDS detail)
type	STS
link
xref	UniSTS:234072
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:207126
definition	standard_name : C86124

name	(CDS detail)
type	STS
link
xref	UniSTS:167273
definition	standard_name : RH127265

name	(CDS detail)
type	STS
link
xref	UniSTS:158775
definition	standard_name : AF000582

name	(CDS detail)
type	STS
link
xref	UniSTS:271621
definition	standard_name : PMC170950P3

name	(CDS detail)
type	STS
link
xref	UniSTS:270698
definition	standard_name : PMC133972P1

name	(CDS detail)
type	STS
link
xref	UniSTS:128926
definition	standard_name : D1Mit67

name	(CDS detail)
type	STS
link
xref	UniSTS:128925
definition	standard_name : D1Mit66

name	(CDS detail)
type	STS
link
xref	UniSTS:128927
definition	standard_name : D1Mit68

name	(CDS detail)
type	STS
link
xref	UniSTS:123253
definition	standard_name : 15.MMHAP20FRE9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:234070
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128538
definition	standard_name : A26

name	(CDS detail)
type	STS
link
xref	UniSTS:123042
definition	standard_name : 10.MMHAP67FLD1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:214443
definition	standard_name : RH131160

name	(CDS detail)
type	STS
link
xref	UniSTS:158776
definition	standard_name : U61110

name	(CDS detail)
type	STS
link
xref	UniSTS:185431
definition	standard_name : C86010

name	(CDS detail)
type	STS
link
xref	UniSTS:124145
definition	standard_name : 35.MMHAP50FLD5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128799
definition	standard_name : D1Mit430

name	(CDS detail)
type	STS
link
xref	UniSTS:125958
definition	standard_name : mHAa23g1.seq

name	LOC383490 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233609 GeneID:383490
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins product : similar to developmental pluripotency associated 5 pseudo : _no_value transcript_id : XR_031240.1

name	EG433273 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149233614 GeneID:433273 MGI:3649089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 131 ESTs, 16 Proteins product : predicted gene, EG433273 transcript_id : XR_001547.2

clone name	MSMg01-503O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413O07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-179C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364H21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-317H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053O04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-251M24.b	B6Ng01-251M24.g
ACC	GA058973	GA058974
length	1,193	179
definition	B6Ng01-251M24.b	B6Ng01-251M24.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc atatatccagaagaagccccaactggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaaactggaaagaacccagat gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc taggatacccacgatataagatacaatttcctaaacacatgaaactcaag aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga aaggatggaccatgtagagactgccatatccagggatccaccccataatc agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac acagaagtggatgctcacagtcagctaatggatggatcacagggctccca atggaggagctagagaaagtacccaaggagctaaagggatcttcacccta taggtggaacacattatgactaaccagtaccctgagctcttgactctagc tgcatatgtatcaaaggatggctagtcggcatcactggaaaggagaggcc catggaacacgcagacctttggtgtgccgtacaggaacgcaagctacggg ggaagtggttggcatacgaacacgagacagatgcctgatctac	acgatctagagataaatcagggcctatgatgaaaaacaaaacaaaacaaa aaaacaacacaaaaagaaacccaaacatatctaaaatatggtcactacag tgagttagtccacagggagatgaagatcagatgaacagaaggatactgca ttaaaacttggttggtggggagggggggg
quality values	Open. Hide. 58 25 29 37 58 58 58 39 27 58 58 58 54 47 42 62 47 42 42 53 47 62 62 49 62 62 62 62 62 62 25 42 15 22 21 20 21 21 24 27 38 37 25 56 62 62 62 59 59 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 59 59 62 59 59 62 62 59 59 62 62 59 62 62 59 56 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 59 59 59 59 59 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 49 49 49 62 62 62 62 62 62 49 49 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 49 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 47 62 62 58 48 58 58 52 58 58 47 58 58 54 54 58 58 58 54 58 54 58 54 58 54 58 54 58 58 58 54 58 53 58 58 58 58 58 54 58 58 58 52 58 58 58 48 58 58 58 58 58 58 58 58 58 58 52 58 58 58 45 54 58 58 54 58 58 58 45 39 58 54 58 58 52 48 47 41 48 49 58 48 48 58 58 58 37 58 38 40 52 45 41 43 49 58 58 58 50 53 53 51 58 50 58 46 50 48 49 51 49 58 58 49 58 51 50 58 50 49 50 51 46 58 58 49 58 54 50 58 53 51 58 51 58 58 58 58 40 41 51 58 58 52 49 27 58 58 58 58 40 58 58 53 54 41 47 40 43 49 49 52 50 44 41 31 41 26 44 39 43 46 50 50 32 58 49 40 51 58 58 44 46 43 33 27 54 54 51 50 47 42 33 42 49 37 41 54 53 34 18 54 51 26 53 53 39 41 41 42 54 42 39 39 34 33 35 39 49 54 51 49 39 53 24 47 51 38 54 25 37 28 52 51 54 46 39 52 37 31 39 51 33 26 51 37 37 49 41 53 31 53 32 33 31 40 52 35 31 31 52 40 42 31 33 31 33 53 51 27 31 15 40 29 37 30 40 40 32 45 34 34 32 32 40 32 32 28 40 26 33 31 52 32 34 37 31 51 38 22 14 30 40 36 24 27 51 45 31 28 31 33 30 25 30 28 31 30 30 18 46 29 31 21 46 51 31 31 30 31 20 31 46 25 26 34 17 9 33 36 31 30 31 26 31 34 30 28 31 41 34 32 36 37 31 33 34 38 30 30 42 26 31 24 32 30 31 31 30 25 29 44 46 30 19 31 32 37 14 30 31 43 38 26 27 31 31 26 36 35 30 31 25 27 17 12 27 20 30 32 31 31 32 25 38 33 24 30 25 26 22 19 24 26 31 7 10 33 26 24 32 28 31 24 26 31 47 24 6 17 23 38 24 9 19 27 33 26 29 15 10 13 9 19 33 24 32 33 15 29 48 25 22 32 32 32 31 24 16 13 26 16 32 24 32 26 14 39 26 12 47 26 6 13 27 14 37 31 33 16 24 22 28 18 12 6 13 6 9 18 21 17 16 7 11 4 12 27 14 21 28 16 30 7 19 17 13 10 18 10 13 27 27 32 40 21 7 12 14 10 24 28 16 10 27 28 19 20 17 15 21 27 24 27 20 14 18 20 19 10 6 16 5 7 11 15 16 25 19 4 7 21 12 12 7 2 2 13 6 10 7 16 7 3 5 21 9 12 15 7 9 3 5 13 8 10 10 8 3 6 7 15 10 9 10 9 11 5 8 6 6 5 7 11 5 11 4 4 22 6 5 17 21 16 7 4 4 7 12 5 3 3 4 2 4 13 3 3 3 7 6 7 5 15 3 3 3 3 1 5 1 3 28 17 26 17 17 3 3 4 10 13 3 4 8 21 6 6 12 18 5 5 5 11 2 1 3 3 3 2 2 4 4 4 11 18 5 1 2 2 7 13 6 3 2 2 1	Open. Hide. 39 59 62 62 33 30 24 17 10 34 18 20 13 34 37 54 54 46 46 56 62 62 62 62 62 62 59 62 59 46 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 49 50 34 32 43 31 45 59 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 54 62 62 62 59 62 59 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 59 59 62 59 62 62 59 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 49 62 62 62 50 45 17

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_13575152_13575330
seq2: B6Ng01-251M24.g_71_249

seq1  ACGATCTAGAGATAAATCAGGGCCTATGATGAAAAACAAAACAAAACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATCTAGAGATAAATCAGGGCCTATGATGAAAAACAAAACAAAACAAA  50

seq1  AAAACAACACAAAAAGAAACCCAAACATATCTAAAATATGGTCACTACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAACACAAAAAGAAACCCAAACATATCTAAAATATGGTCACTACAG  100

seq1  TGAGTTAGTCCACAGGGAGATGAAGATCAGATGAACAGAAGGATACTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTAGTCCACAGGGAGATGAAGATCAGATGAACAGAAGGATACTGCA  150

seq1  TTAAAACTTGGTTGGTGGGGAGGGGGGGG  179
      |||||||||||||||||||||||||||||
seq2  TTAAAACTTGGTTGGTGGGGAGGGGGGGG  179

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information