BAC Information

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BAC

Clone NameB6Ng01-252L05
Chromosome1 (Build37)
Map Location 30,194,987 - 30,328,885
singlet/doubletdoublet
Overlap genenone
Upstream geneEG433283, LOC100040665, LOC665944
Downstream geneEG624138, LOC100040699, Phf3, EG638995, Ptp4a1, EG435615, LOC669402, EG435616, 4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252L05.bB6Ng01-252L05.g
ACCGA059626GA059627
length509817
definitionB6Ng01-252L05.b B6Ng01-252L05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,194,987 - 30,195,501)(30,328,317 - 30,328,885)
sequence
tcaagcccagaacagtactgtcatagcaggaccagaagctgtgcctgcct
ggtcttcctcttccagtactgaaataattcataatctctttaagattagc
agaagtttttttttttcatgctccaagggtatctgtcatcaagagaaatt
ggtggatgaaaattatatccaatatatatacaggaatatagcaaaatatt
agttatagtagtagtagtaatagtagtaaagcaagaatgtatctatgatt
acagtgaatttataaatgtagagaggtaatatacacacagaacagagaga
tatagatagatatagatatagatatagatatagatatagatatagatgat
atagatatagatattagcctggggaagagaatatgatttataaaaggaga
gattccttagctattttctaaaatgaaaatactcaagaagacacagagaa
ggaaatcttaataaataaggtgatatattttattttattttattttattt
cattttatt

gaattcatggccactgatgaaataatggtgcaaatatgatgggagtaacc
aactactttctgattacaattaagacctgcttcccaagatgacagtcata
tctggacccattaacagggccaaaaacctggggggttgaaaggcacagac
catacagaaaaaattactaaagttaatctactaaattcaggcagcactaa
atgacttattgttatatatatagatctttgcatccctcagtattcatcag
agaatcttctatttgcagtagatggtaattaataaagaaactcagagcta
cataaggaccctcctccaatggtttagaaatgattgtaaagaggggatag
aaggagtataagaactagaggtggatataactacaagtcttctggataaa
acaggatagctgaccataaaaaaaacccaagtatttgtgatgtgtgcaag
cttaaacaatatcaattctagacatgaaaaccactggtcctatctctcgt
caagccacttgctaagttttagatgaaagagagtcagttttctttgagta
tatgccctgacaaagttggccttacttcagtgaaagtacacactttaaga
ataaatgggaagcaaatttagactttatggttgaaaaaaaccaaaaaggc
cacagagttgggtatgtagggaagggatagatctcataaatattgtagga
agagtgcacatgatcaaaatattttatatgaaaatttcaaaagaactaat
aaaaaggcataataatatcctttgcactgagaagaggcactggtaatttg
acttcctagttgattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_30194987_30195501
seq2: B6Ng01-252L05.b_47_561

seq1  GAATTCTCAAGCCCAGAACAGTACTGTCATAGCAGGACCAGAAGCTGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAGCCCAGAACAGTACTGTCATAGCAGGACCAGAAGCTGTGC  50

seq1  CTGCCTGGTCTTCCTCTTCCAGTACTGAAATAATTCATAATCTCTTTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGGTCTTCCTCTTCCAGTACTGAAATAATTCATAATCTCTTTAAG  100

seq1  ATTAGCAGAAGTTTTTTTTTTTCATGCTCCAAGGGTATCTGTCATCAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCAGAAGTTTTTTTTTTTCATGCTCCAAGGGTATCTGTCATCAAGA  150

seq1  GAAATTGGTGGATGAAAATTATATCCAATATATATACAGGAATATAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGGTGGATGAAAATTATATCCAATATATATACAGGAATATAGCAA  200

seq1  AATATTAGTTATAGTAGTAGTAGTAATAGTAGTAAAGCAAGAATGTATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAGTTATAGTAGTAGTAGTAATAGTAGTAAAGCAAGAATGTATCT  250

seq1  ATGATTACAGTGAATTTATAAATGTAGAGAGGTAATATACACACAGAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTACAGTGAATTTATAAATGTAGAGAGGTAATATACACACAGAACA  300

seq1  GAGAGATATAGATAGATATAGATATAGATATAGATATAGATATAGATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATATAGATAGATATAGATATAGATATAGATATAGATATAGATATA  350

seq1  GATGATATAGATATAGATATTAGCCTGGGGAAGAGAATATGATTTATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATATAGATATAGATATTAGCCTGGGGAAGAGAATATGATTTATAAA  400

seq1  AGGAGAGATTCCTTAGCTATTTTCTAAAATGAAAATACACAAGAAGACAC  450
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGGAGAGATTCCTTAGCTATTTTCTAAAATGAAAATACTCAAGAAGACAC  450

seq1  AGAGAAGGAAATCTTAATAAATAAGGTGATATATTTTATTTTATTTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGGAAATCTTAATAAATAAGGTGATATATTTTATTTTATTTTATT  500

seq1  TTATTTTATTTTATT  515
      |||||| ||||||||
seq2  TTATTTCATTTTATT  515


seq1: chr1_30328317_30328885
seq2: B6Ng01-252L05.g_314_884 (reverse)

seq1  ATAATCAACTAGGAAGTC-AATTACCAGTGCCTCTTCTCAGTGCAAGGAT  49
      |||||||||||||||||| ||||||||||||||||||||||||||| |  
seq2  ATAATCAACTAGGAAGTCAAATTACCAGTGCCTCTTCTCAGTGCAAAGGA  50

seq1  TATTATTATGCCTTTTTATTAGTTC-TTTGAAATTTTCATATAAAATATT  98
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TATTATTATGCCTTTTTATTAGTTCTTTTGAAATTTTCATATAAAATATT  100

seq1  TTGATCATGTGCACTCTTCCTACAATATTTATGAGATCTATCCCTTCCCT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCATGTGCACTCTTCCTACAATATTTATGAGATCTATCCCTTCCCT  150

seq1  ACATACCCAACTCTGTGGCCTTTTTGGTTTTTTTCAACCATAAAGTCTAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCCAACTCTGTGGCCTTTTTGGTTTTTTTCAACCATAAAGTCTAA  200

seq1  ATTTGCTTCCCATTTATTCTTAAAGTGTGTACTTTCACTGAAGTAAGGCC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTTCCCATTTATTCTTAAAGTGTGTACTTTCACTGAAGTAAGGCC  250

seq1  AACTTTGTCAGGGCATATACTCAAAGAAAACTGACTCTCTTTCATCTAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGTCAGGGCATATACTCAAAGAAAACTGACTCTCTTTCATCTAAA  300

seq1  ACTTAGCAAGTGGCTTGACGAGAGATAGGACCAGTGGTTTTCATGTCTAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGCAAGTGGCTTGACGAGAGATAGGACCAGTGGTTTTCATGTCTAG  350

seq1  AATTGATATTGTTTAAGCTTGCACACATCACAAATACTTGGGTTTTTTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATATTGTTTAAGCTTGCACACATCACAAATACTTGGGTTTTTTTT  400

seq1  ATGGTCAGCTATCCTGTTTTATCCAGAAGACTTGTAGTTATATCCACCTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCAGCTATCCTGTTTTATCCAGAAGACTTGTAGTTATATCCACCTC  450

seq1  TAGTTCTTATACTCCTTCTATCCCCTCTTTACAATCATTTCTAAACCATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTTATACTCCTTCTATCCCCTCTTTACAATCATTTCTAAACCATT  500

seq1  GGAGGAGGGTCCTTATGTAGCTCTGAGTTTCTTTATTAATTACCATCTAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGGGTCCTTATGTAGCTCTGAGTTTCTTTATTAATTACCATCTAC  550

seq1  TGCAAATAGAAGATTCTCTGA  569
      |||||||||||||||||||||
seq2  TGCAAATAGAAGATTCTCTGA  571


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