BAC Information

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BAC

Clone NameB6Ng01-252L07
Chromosome1 (Build37)
Map Location 51,752,509 - 51,753,639
singlet/doubletsinglet
Overlap genenone
Upstream geneTmeff2, Sdpr, LOC383504, Obfc2a
Downstream geneMyo1b, EG667010, LOC667014, Stat4, LOC100042634, Stat1, Gls, LOC546735, Nab1, LOC546736, Gm553, LOC100042094, EG433305, 5330401P04Rik, 2210010L05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252L07.bB6Ng01-252L07.g
ACCGA059630GA059631
length9621,136
definitionB6Ng01-252L07.b B6Ng01-252L07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatagatattggatattagtcccc
tatctgattttggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacggtgtcttttgccttgcagaagctttgcaatgttat
gaagtcccatttatcgattctcaatcttactgcacaagccattgctgttc
tattcaggaatttttcccctgtacccaattcttcgaggcttttccctact
ttctcctctataagtttcagtgtctctggttttatgtggagttccttaat
ccacttagatttgaccttagtacaaggagatagaaatggatcaattctca
atcttctacatgataacagccagttgtgccagcaccaattgttgaaaatg
ctgtcttttttccactggatggttttagctcccttgtcaaagatcaagtg
accataggtatgtgggttcatctctgggtcttcaattctgttcccttggt
ctacttgtctgtcactataccagtaccatgcagtttttatcacaattgct
ctgtagtacagctttaggtcaggcatggtgattccaccagagggtctttt
atccttgagaagagtttttgctatcctaggtttttgttattccagatgaa
tctgcagattgccctttctaattcgttgaaaaattgagttggaattttga
tggggattgcgttgaatctgtaaattgcttttggcaagatagccattttt
actatattgatcctgccaatccatgagcatgggagatctttcgatctttc
tgagatcttctttaatttctttcttcagagactttgaaagttcttatcat
gcagatctttcacttcccttagttagagtcacgcccaaggtattttatat
tatttgtgacta
gaattctcacttgattctttacggctgttaaacacaaagaacaaagtggc
cagcaataattgtgtcacatttaaccttgagctttgcagaggcctggatt
gcctgagagtctgagctttggacctgagaatgtggcttggtatagtcctg
acctaacacacacaaacaccaccactgcataaatcagggcgtggtgatgc
tctctatggaggtggaaggattctcagccacacagtgagttaaggccagt
gtgagatacatgagactatctcaaaacacacaaaaatctgggctttggaa
ctgaatggaagtagattaaaacctttgctttagtacatcagggcaacact
gggtccttgtgtctcagtttttttgtttgtttgtttgttttttctgtatg
gttaagttgaaatgacattttgtgtgtaaaggaagtaacaaaaaagtatg
aaataaacatattagtgtaaaatgggctctattcattaatttcctgggtt
ctcatgctccgtgtcattggctttaatcttgagccagtgacctcattatc
cgtgagtgaccctggtgcttaaccttagcactcatagtgctcaggtttaa
gaccagagcatctcagcctcaggtgtataaaaagcccttctgaaactgtg
tgcgaagctttatgaaaggtggagtgaggaggatcaggaatttaaggtca
tcctacataccaaagggctaacctaggttatatgacacccaatctcaaac
aaacaaacaaacaaacaaacagttcttcttacatgagatagacagtacga
gttctgggttggggcttggatagctcagaagaagatagtgtgtaatactc
ccagactgaaatcctgagatatggcccttgaagatgacagtatgaagctc
tacaattctgttttctgccctttcacaacagtactactctcccacaatcc
agtcctgacatgggacatactactttgggggtgtctctctgcctttctct
tcctggaaatatcctttggcatgcttccacttgctggactccttgaacct
tgggtgatctctcttgcacagcattcatcagtcctccctgagtgcattct
ctttcttcttcaatgtagctctagtcagcagcttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_51752509_51753639
seq2: B6Ng01-252L07.g_69_1204 (reverse)

seq1  TAAAGCTGCTGAC-AGAGCTACATGGAAGAAGAAAGAGATGGCACTCAGG  49
      ||||||||||||| |||||||||| ||||||||||||||  |||||||||
seq2  TAAAGCTGCTGACTAGAGCTACATTGAAGAAGAAAGAGAATGCACTCAGG  50

seq1  GAAGACTGATG-ATGCTGTGCAAGAGGAGATCACCCAAGG-TCAAGGAGT  97
      || |||||||| ||||||||||||| |||||||||||||| |||||||||
seq2  GAGGACTGATGAATGCTGTGCAAGA-GAGATCACCCAAGGTTCAAGGAGT  99

seq1  CCAGCAGGTGGAAGCATGCCAAAAGGATA-TTCCAGGAAGAGAAAGGCAG  146
      |||||| ||||||||||||| |||||||| ||||||||||||||||||||
seq2  CCAGCAAGTGGAAGCATGCC-AAAGGATATTTCCAGGAAGAGAAAGGCAG  148

seq1  AGGAGACACCCC--AAGTAGTATGT-CCATGTCAGGACTGGATGGTGGGA  193
      | ||||||||||  ||||||||||| ||||||||||||||||| ||||||
seq2  A-GAGACACCCCCAAAGTAGTATGTCCCATGTCAGGACTGGATTGTGGGA  197

seq1  GAGTAGTACTG-TGTGAAAGGGCAGAAAACAGAATTGTAGAGCTTCATAC  242
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGTACTGTTGTGAAAGGGCAGAAAACAGAATTGTAGAGCTTCATAC  247

seq1  TGTCATCTTCAAGGGCCATATCTCAGGATTTCAGTCTGGGAGTATTACAC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATCTTCAAGGGCCATATCTCAGGATTTCAGTCTGGGAGTATTACAC  297

seq1  ACTATCTTCTTCTGAGCTATCCAAGCCCCAACCCAGAACTCGTACTGTCT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTTCTTCTGAGCTATCCAAGCCCCAACCCAGAACTCGTACTGTCT  347

seq1  ATCTCATGTAAGAAGAACTGTTTGTTTGTTTGTTTGTTTGTTTGAGATTG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATGTAAGAAGAACTGTTTGTTTGTTTGTTTGTTTGTTTGAGATTG  397

seq1  GGTGTCATATAACCTAGGTTAGCCCTTTGGTATGTAGGATGACCTTAAAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCATATAACCTAGGTTAGCCCTTTGGTATGTAGGATGACCTTAAAT  447

seq1  TCCTGATCCTCCTCACTCCACCTTTCATAAAGCTTCGCACACAGTTTCAG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGATCCTCCTCACTCCACCTTTCATAAAGCTTCGCACACAGTTTCAG  497

seq1  AAGGGCTTTTTATACACCTGAGGCTGAGATGCTCTGGTCTTAAACCTGAG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTTTTTATACACCTGAGGCTGAGATGCTCTGGTCTTAAACCTGAG  547

seq1  CACTATGAGTGCTAAGGTTAAGCACCAGGGTCACTCACGGATAATGAGGT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGAGTGCTAAGGTTAAGCACCAGGGTCACTCACGGATAATGAGGT  597

seq1  CACTGGCTCAAGATTAAAGCCAATGACACGGAGCATGAGAACCCAGGAAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCTCAAGATTAAAGCCAATGACACGGAGCATGAGAACCCAGGAAA  647

seq1  TTAATGAATAGAGCCCATTTTACACTAATATGTTTATTTCATACTTTTTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGAATAGAGCCCATTTTACACTAATATGTTTATTTCATACTTTTTT  697

seq1  GTTACTTCCTTTACACACAAAATGTCATTTCAACTTAACCATACAGAAAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTTCCTTTACACACAAAATGTCATTTCAACTTAACCATACAGAAAA  747

seq1  AACAAACAAACAAACAAAAAAACTGAGACACAAGGACCCAGTGTTGCCCT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAACAAACAAAAAAACTGAGACACAAGGACCCAGTGTTGCCCT  797

seq1  GATGTACTAAAGCAAAGGTTTTAATCTACTTCCATTCAGTTCCAAAGCCC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTACTAAAGCAAAGGTTTTAATCTACTTCCATTCAGTTCCAAAGCCC  847

seq1  AGATTTTTGTGTGTTTTGAGATAGTCTCATGTATCTCACACTGGCCTTAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTGTGTGTTTTGAGATAGTCTCATGTATCTCACACTGGCCTTAA  897

seq1  CTCACTGTGTGGCTGAGAATCCTTCCACCTCCATAGAGAGCATCACCACG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGTGTGGCTGAGAATCCTTCCACCTCCATAGAGAGCATCACCACG  947

seq1  CCCTGATTTATGCAGTGGTGGTGTTTGTGTGTGTTAGGTCAGGACTATAC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGATTTATGCAGTGGTGGTGTTTGTGTGTGTTAGGTCAGGACTATAC  997

seq1  CAAGCCACATTCTCAGGTCCAAAGCTCAGACTCTCAGGCAATCCAGGCCT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCACATTCTCAGGTCCAAAGCTCAGACTCTCAGGCAATCCAGGCCT  1047

seq1  CTGCAAAGCTCAAGGTTAAATGTGACACAATTATTGCTGGCCACTTTGTT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAAGCTCAAGGTTAAATGTGACACAATTATTGCTGGCCACTTTGTT  1097

seq1  CTTTGTGTTTAACAGCCGTAAAGAATCAAGTGAGAATTC  1131
      |||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGTTTAACAGCCGTAAAGAATCAAGTGAGAATTC  1136