BAC Information

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BAC

Clone NameB6Ng01-253L03
Chromosome1 (Build37)
Map Location 7,615,558 - 7,616,456
singlet/doubletsinglet
Overlap genenone
Upstream geneSt18, LOC665015, LOC665027, LOC100039347, LOC435608, Pcmtd1, LOC545302, LOC665063
Downstream geneLOC665069, LOC100039408, Sntg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253L03.bB6Ng01-253L03.g
ACCGA060360GA060361
length9311,149
definitionB6Ng01-253L03.b B6Ng01-253L03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatcagacctccaaagaagacctaataccaatactcttcaaact
attccacaaaatagaaacagaaggaacactacccagttcattccatgaag
ccacagttatgctgagtattctcccttggatatggaactgtttctgtcta
atcaggatcttgtcacaatttcttttcatagagcttcataagagattttt
ttttctattcctatcatgtttacaatagattttaaatctagttgagtaca
tactacttttagcttcagaagatattatatatattcagaagatatcagat
gcattaaaccattataaattattttgctgacttaaaaatgtcaatacaga
gttgtatattttaaaataaattttattagtttaataggaaaagcaaaaaa
aaattttagggcttcattttgtctttgctatttgctattttcagtcttca
gtaaattatagtatttttaaaatttccttcttaacttctgccttgaccta
attataattcactatcatattatttagcctccatgtgttatgcattttct
attgatgttgatccaaattcatctgtttttattcaagtagaatacaggat
attcctttcctacatttgttgaaacttgttttgtgttctaaaatgatgga
ttttcaaaaatattccaaggacttttatgaagaaagctgtattatttttc
tcctcctaatcttccttgtcagggcgcgggtgagaatgttccatacatat
gtgtattaaaataaaatttaatttatttatggtaatcttatccccaacca
tttctcctgttttagtttttcgcctgggggaacatgttcttatttggcca
tattgagtattagaactcctcatccatatttttagatcctaacagtgttt
tatgcttgtgaagttgggatgtcccccattt

gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
ggagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggag
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaaaatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaaatggctatcttgccaaaa
gcaatctacagattcaatgcaatccccatcaaaattccaactcaattctt
caacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaac
ctagggtagcaaaaactcttctcaaggataaaagaacctctggtggaatc
accatgcctgacctaaagctttactacagagcaattgtggtaaaaactgc
atggtactggtatagagacagacaagtagaccaatggaatagaattgaag
acccagaaatgaacccacacacctatggtcacttgatcttcgacaaggag
ctaaaaccatccagtgggaagaaagacagcattttcaacaattggtgctg
gcacaactgggttgttatcatgtagaagaatgcgaatcgattcatactat
ctccttgtataaggtcaaatctaaatgatcaagaacttcacataaaacca
gagaacactgaactatagagagaaggtggggaaagctggaagaatatggc
caggaaattcctgacgacagcatgctggtgcctataagaattcggagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_7615558_7616456
seq2: B6Ng01-253L03.b_46_951

seq1  GAATTCTATCAGACCTCCAAAGAAGACCTAATACCAATACTCTTCAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCAGACCTCCAAAGAAGACCTAATACCAATACTCTTCAAACT  50

seq1  ATTCCACAAAATAGAAACAGAAGGAACACTACCCAGTTCATTCCATGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACAAAATAGAAACAGAAGGAACACTACCCAGTTCATTCCATGAAG  100

seq1  CCACAGTTATGCTGAGTATTCTCCCTTGGATATGGAACTGTTTCTGTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTTATGCTGAGTATTCTCCCTTGGATATGGAACTGTTTCTGTCTA  150

seq1  ATCAGGATCTTGTCACAATTTCTTTTCATAGAGCTTCATAAGAGATTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGATCTTGTCACAATTTCTTTTCATAGAGCTTCATAAGAGATTTTT  200

seq1  TTTTCTATTCCTATCATGTTTACAATAGATTTTAAATCTAGTTGAGTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTATTCCTATCATGTTTACAATAGATTTTAAATCTAGTTGAGTACA  250

seq1  TACTACTTTTAGCTTCAGAAGATATTATATATATTCAGAAGATATCAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACTTTTAGCTTCAGAAGATATTATATATATTCAGAAGATATCAGAT  300

seq1  GCATTAAACCATTATAAATTATTTTGCTGACTTAAAAATGTCAATACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAAACCATTATAAATTATTTTGCTGACTTAAAAATGTCAATACAGA  350

seq1  GTTGTATATTTTAAAATAAATTTTATTAGTTTAATAGGAAAAGCAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTATATTTTAAAATAAATTTTATTAGTTTAATAGGAAAAGCAAAAAA  400

seq1  AAATTTTAGGGCTTCATTTTGTCTTTGCTATTTGCTATTTTCAGTCTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTAGGGCTTCATTTTGTCTTTGCTATTTGCTATTTTCAGTCTTCA  450

seq1  GTAAATTATAGTATTTTTAAAATTTCCTTCTTAACTTCTGCCTTGACCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTATAGTATTTTTAAAATTTCCTTCTTAACTTCTGCCTTGACCTA  500

seq1  ATTATAATTCACTATCATATTATTTAGCCTCCATGTGTTATGCATTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAATTCACTATCATATTATTTAGCCTCCATGTGTTATGCATTTTCT  550

seq1  ATTGATGTTGATCCAAATTCATCTGTTTTTATTCAAGTAGAATACAGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATGTTGATCCAAATTCATCTGTTTTTATTCAAGTAGAATACAGGAT  600

seq1  ATTCCTTTCCTACATTTGTTGAAACTTGTTTTGTGTTCTAAAATGATGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTCCTACATTTGTTGAAACTTGTTTTGTGTTCTAAAATGATGGA  650

seq1  TTTTCAAAAATATTCCAAGGACTTTTATGAAGAAAGCTTTTTTTTTTTTT  700
      |||||||||||||||||||||||||||||||||||||             
seq2  TTTTCAAAAATATTCCAAGGACTTTTATGAAGAAAGC-------------  687

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTGTCTGGGTGA-AA  749
       | | || ||||| |  |  |  | ||  || | || |   |||||| ||
seq2  -TGTATTATTTTTCTCCTCCTAATCTTCCTTGTCAGGGCGCGGGTGAGAA  736

seq1  TGTTCCATACATA--TGTATTAGA--TAAATTTAATTTA-TTAT-GTAAT  793
      |||||||||||||  ||||||| |   |||||||||||| |||| |||||
seq2  TGTTCCATACATATGTGTATTAAAATAAAATTTAATTTATTTATGGTAAT  786

seq1  C-TATCCTCAA-CATTTCT-CTG-TTTAGTTTTT-GCCT-GGGGAACATG  837
      | ||||| ||| ||||||| ||| |||||||||| |||| ||||||||||
seq2  CTTATCCCCAACCATTTCTCCTGTTTTAGTTTTTCGCCTGGGGGAACATG  836

seq1  -TCT--ATTGGTCATATTGAGTATTAG-ACTC--TATCAATAATTTTAGA  881
       |||   |||| ||||||||||||||| ||||   ||| ||| |||||||
seq2  TTCTTATTTGGCCATATTGAGTATTAGAACTCCTCATCCATATTTTTAGA  886

seq1  T-CTAACAGTG-TTTATGCT  899
      | ||||||||| ||||||||
seq2  TCCTAACAGTGTTTTATGCT  906


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