BAC Information

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BAC

Clone NameB6Ng01-255A05
Chromosome1 (Build37)
Map Location 8,933,693 - 8,934,223
singlet/doubletsinglet
Overlap geneSntg1
Upstream geneLOC100039474, LOC620444, EG665007
Downstream geneLOC665103, LOC100039464, EG620853, LOC665138, Rrs1, Adhfe1, LOC620542, 3110035E14Rik, Mybl1, Vcpip1, LOC100039536, LOC665173, Sgk3, EG620986, LOC100039643, 6030422M02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255A05.bB6Ng01-255A05.g
ACCGA061327GA061328
length1,177525
definitionB6Ng01-255A05.b B6Ng01-255A05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaagtgaggaatacagaatggatgagaagcacctgaaaaaatg
tttaacagccttaatcatcagggaaatgcaaatcaaaacaaccttgagat
tccacctcacaccagtcagaatggctaagttcaaaaattcaggtgacagc
agatgctagcaaggatgtggagaaagagcaacactcctctattgctggtg
ggattgcaagcttgtacaaccactctggaagtcagtctggaggttcctca
gataactggacatagtactactgctagatccagcaatacctctcctggga
atatacccagaagaagttccaactggtaataagaacacatgctccactat
cttcatagcagccttatttataatagccagaagctggaaataacccaaga
tgtccctcaacaaagaatggatacagaaattgtggtacatttacacaatt
gagtacaactcagcttttaaaaacaatggatttatgaaattcttggacaa
atggatgtatctagaggatatcatccttagtgaggtaacccaatcacaaa
agaagtcattagatatgcactcactgataagtggatattagcccagaaac
agagaacacccaagatacaatttgcaaaacacaagaaaatcaagaaaagg
gaagaccaatgtgtggatacttcattcctccttaaaatagggaacaaaaa
tacccattaaaggagttatagagacaatgtttggagctaagacgaatgga
tggagtaaccagactaccccactcggggttccatcccataatcagccacc
aaacccagacactattgaatatgccagcaagatttttgctgaagggaccc
tggtatagctgtcttttacaaggctataccagtgcctagaaaatacagaa
gtggatgctcacagtcatctataagatggaacgtagggcctctaatggag
aagctagagaaagcacccaaggagctgaagggtctacaccctataggtgg
aactaaccagtaccaccagagctcgtgtcttctagctgcatatgtagcgg
aagatggcctagtctgcatcactgaaagagaaggcctccttgatctgcca
actttatatgttccattacaggaatgccatgccagaatgcattgggtgtg
tgtatggggtcatgacgcgggtgtaag
cactgattctctcaagttcttgaaaagaataaacaagaaaaactcagtga
attctggactttcttcttttgggatcagtggaagaagaggggattctctt
gtaaaggctacaggatagccctattcctgtagagactcctggttaaagct
agtctccttctttgcttccacttgaatccaatatccacaatagttttttt
ttttttttttttttttttgtattgctcaccagaaactcacttccttttaa
aatttaatatttcctttaacgtttttagagtttgttttataaggttcttt
taataacttatcacccagttaaaacacagggtttttgtttttgtttttct
taatgttttcctggagaagctctgtgaagtagaaagccacaatcttatag
taaacttcagtttggctacttctttacacttggaatgactgcttctccct
ctggggaatttatcatgctattgacaactctgctctctatataggaagtt
ggtttgttggttggttggttggttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_8933693_8934223
seq2: B6Ng01-255A05.g_68_598

seq1  GAATTCCACTGATTCTCTCAAGTTCTTGAAAAGAATAAACAAGAAAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTGATTCTCTCAAGTTCTTGAAAAGAATAAACAAGAAAAACT  50

seq1  CAGTGAATTCTGGACTTTCTTCTTTTGGGATCAGTGGAAGAAGAGGGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAATTCTGGACTTTCTTCTTTTGGGATCAGTGGAAGAAGAGGGGAT  100

seq1  TCTCTTGTAAAGGCTACAGGATAGCCCTATTCCTGTAGAGACTCCTGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGTAAAGGCTACAGGATAGCCCTATTCCTGTAGAGACTCCTGGTT  150

seq1  AAAGCTAGTCTCCTTCTTTGCTTCCACTTGAATCCAATATCCACAATAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTAGTCTCCTTCTTTGCTTCCACTTGAATCCAATATCCACAATAGT  200

seq1  TTTTTTTTTTTTTTTTTTTTTTTTGTATTGCTCACCAGAAACTCACTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTTTGTATTGCTCACCAGAAACTCACTTCC  250

seq1  TTTTAAAATTTAATATTTCCTTTAACGTTTTTAGAGTTTGTTTTATAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAATTTAATATTTCCTTTAACGTTTTTAGAGTTTGTTTTATAAGG  300

seq1  TTCTTTTAATAACTTATCACCCAGTTAAAACACAGGGTTTTTGTTTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTAATAACTTATCACCCAGTTAAAACACAGGGTTTTTGTTTTTGT  350

seq1  TTTTCTTAATGTTTTCCTGGAGAAGCTCTGTGAAGTAGAAAGCCACAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTAATGTTTTCCTGGAGAAGCTCTGTGAAGTAGAAAGCCACAATC  400

seq1  TTATAGTAAACTTCAGTTTGGCTACTTCTTTACACTTGGAATGACTGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTAAACTTCAGTTTGGCTACTTCTTTACACTTGGAATGACTGCTT  450

seq1  CTCCCTCTGGGGAATTTATCATGCTATTGACAACTCTGCTCTCTATATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCTGGGGAATTTATCATGCTATTGACAACTCTGCTCTCTATATAG  500

seq1  GAAGTTGGTTTGTTGGTTGGTTGGTTGGTTG  531
      |||||||||||||||||||||||||||||||
seq2  GAAGTTGGTTTGTTGGTTGGTTGGTTGGTTG  531