MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-255C12
Chromosome	1 (Build37)
Map Location	153,598,834 - 153,761,338
singlet/doublet	doublet
Overlap gene	Edem3, 1700025G04Rik
Upstream gene	EG545370, LOC668040, LOC676758, EG668050, LOC668055, 3110040M04Rik, LOC100043286, Ivns1abp, 1200016B10Rik, 1190005F20Rik, Rnf2, Niban
Downstream gene	LOC668076, 5730449L18Rik, Glt25d2, Rgl1, EG639787, Apobec4, Arpc5, Ncf2, Smg7
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG545370 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545370 MGI:3646881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668040 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668040
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	LOC676758 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676758
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs

name	EG668050 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668050 MGI:3648958
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs

name	LOC668055 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668055
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs

name	3110040M04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73176 MGI:1920426
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs

name	LOC100043286 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs

name	Ivns1abp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:117198 MGI:2152389
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	1200016B10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66875 MGI:1914125
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1190005F20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98685 MGI:1916185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19821 MGI:1101759
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Niban (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:63913 MGI:2137237
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Edem3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66967 MGI:1914217
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700025G04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69399 MGI:1916649
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668076 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 9 Proteins pseudo : _no_value

name	5730449L18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66637 MGI:1913887
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Glt25d2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269132 MGI:2138232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rgl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19731 MGI:107484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG639787 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:639787 MGI:3645261
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 112 ESTs, 8 Proteins pseudo : _no_value

name	Apobec4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71281 MGI:1918531
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arpc5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67771 MGI:1915021
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ncf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17970 MGI:97284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smg7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226517 MGI:2682334
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG545370 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371430 GeneID:545370 MGI:3646881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG545370 transcript_id : NM_001024720.2

name	LOC676758 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234334 GeneID:676758
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs product : similar to U2-associated SR140 protein transcript_id : XM_001480223.1

name	EG668050 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94364009 GeneID:668050 MGI:3648958
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs product : predicted gene, EG668050 transcript_id : XM_993953.1

name	LOC668055 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94364011 GeneID:668055
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs product : similar to U2-associated SR140 protein transcript_id : XM_993975.1

name	3110040M04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94364013 GeneID:73176 MGI:1920426
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs product : RIKEN cDNA 3110040M04 gene transcript_id : XM_993996.1

name	LOC100043286 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234336 GeneID:100043286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs product : similar to U2-associated SR140 protein transcript_id : XM_001480239.1

name	Ivns1abp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87239989 GeneID:117198 MGI:2152389
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : influenza virus NS1A binding protein transcript_id : NM_054102.2

name	Ivns1abp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87239995 GeneID:117198 MGI:2152389
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : influenza virus NS1A binding protein transcript_id : NM_001039512.1

name	Ivns1abp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87239991 GeneID:117198 MGI:2152389
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : influenza virus NS1A binding protein transcript_id : NM_001039511.1

name	1200016B10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347972 GeneID:66875 MGI:1914125
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1200016B10 gene transcript_id : NM_025819.3

name	1190005F20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363477 GeneID:98685 MGI:1916185
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1190005F20 gene transcript_id : NM_026876.2

name	Rnf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802412 GeneID:19821 MGI:1101759
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 2 transcript_id : NM_011277.2

name	Niban (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130415 GeneID:63913 MGI:2137237
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : niban protein transcript_id : NM_022018.2

name	Edem3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88900436 GeneID:66967 MGI:1914217
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ER degradation enhancer, mannosidase alpha-like 3 transcript_id : NM_001039644.1

name	1700025G04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130775 GeneID:69399 MGI:1916649
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700025G04 gene transcript_id : NM_197990.2

name	5730449L18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803579 GeneID:66637 MGI:1913887
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730449L18 gene transcript_id : NM_025677.2

name	Glt25d2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46195810 GeneID:269132 MGI:2138232
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycosyltransferase 25 domain containing 2 transcript_id : NM_177756.3

name	Rgl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131206 GeneID:19731 MGI:107484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ral guanine nucleotide dissociation stimulator,-like 1 transcript_id : NM_016846.3

name	Apobec4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487114 GeneID:71281 MGI:1918531
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative) transcript_id : NM_001081197.1

name	Arpc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385865 GeneID:67771 MGI:1915021
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : actin related protein 2/3 complex, subunit 5 transcript_id : NM_026369.1

name	Ncf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354494 GeneID:17970 MGI:97284
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neutrophil cytosolic factor 2 transcript_id : NM_010877.3

name	Smg7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:53828717 GeneID:226517 MGI:2682334
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) transcript_id : NM_001005507.1

name	EG545370 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701546 CCDS:CCDS15357.1 GeneID:545370 MGI:3646881
definition	codon_start : 1 product : hypothetical protein LOC545370 protein_id : NP_001019891.1

name	LOC676758 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234335 GeneID:676758
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480273.1

name	EG668050 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94364010 GeneID:668050 MGI:3648958
definition	codon_start : 1 product : hypothetical protein protein_id : XP_999047.1

name	LOC668055 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94364012 GeneID:668055
definition	codon_start : 1 product : hypothetical protein protein_id : XP_999069.1

name	3110040M04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94364014 GeneID:73176 MGI:1920426
definition	codon_start : 1 product : hypothetical protein LOC73176 protein_id : XP_999090.1

name	LOC100043286 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234337 GeneID:100043286
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480289.1

name	Ivns1abp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87239990 CCDS:CCDS15359.1 GeneID:117198 MGI:2152389
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; kelch family protein Nd1 product : influenza virus NS1A binding protein isoform 2 protein_id : NP_473443.2

name	Ivns1abp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87239996 CCDS:CCDS15358.1 GeneID:117198 MGI:2152389
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; kelch family protein Nd1 product : influenza virus NS1A binding protein isoform 3 protein_id : NP_001034601.1

name	Ivns1abp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87239992 GeneID:117198 MGI:2152389
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; kelch family protein Nd1 product : influenza virus NS1A binding protein isoform 1 protein_id : NP_001034600.1

name	1200016B10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229006 CCDS:CCDS15360.1 GeneID:66875 MGI:1914125
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC66875 protein_id : NP_080095.2

name	1190005F20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74959790 CCDS:CCDS15361.1 GeneID:98685 MGI:1916185
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : N2,N2-dimethylguanosine tRNA methyltransferase-like protein_id : NP_081152.1

name	Rnf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563274 CCDS:CCDS15362.1 GeneID:19821 MGI:1101759
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0016604 - nuclear body [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0031519 - PcG protein complex [Evidence IDA]; GO:0001739 - sex chromatin [Evidence IDA]; GO:0000151 - ubiquitin ligase complex [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence IDA]; GO:0016564 - transcriptional repressor activity [Evidence IMP]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0009948 - anterior/posterior axis specification [Evidence IMP]; GO:0010003 - gastrulation (sensu Mammalia) [Evidence IMP]; GO:0016574 - histone ubiquitination [Evidence IDA] [Evidence IGI]; GO:0000278 - mitotic cell cycle [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : ring finger protein 2 protein_id : NP_035407.1

name	Niban (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11528504 GeneID:63913 MGI:2137237
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : niban protein protein_id : NP_071301.1

name	Edem3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:88900437 GeneID:66967 MGI:1914217
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0004571 - mannosyl-oligosaccharide 1,2-alpha-mannosidase activity [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ER degradation enhancing alpha-mannosidase-like protein_id : NP_001034733.1

name	1700025G04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37574070 GeneID:69399 MGI:1916649
definition	codon_start : 1 product : RIKEN cDNA 1700025G04 protein_id : NP_932107.1

name	5730449L18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385138 CCDS:CCDS15363.1 GeneID:66637 MGI:1913887
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0008033 - tRNA processing [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC66637 protein_id : NP_079953.1

name	Glt25d2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46195811 CCDS:CCDS15364.1 GeneID:269132 MGI:2138232
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0009103 - lipopolysaccharide biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : glycosyltransferase 25 domain containing 2 protein_id : NP_808424.2

name	Rgl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543584 CCDS:CCDS15365.1 GeneID:19731 MGI:107484
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 product : ral guanine nucleotide dissociation stimulator-like 1 protein_id : NP_058542.2

name	Apobec4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487115 GeneID:71281 MGI:1918531
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA] codon_start : 1 product : apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative) protein_id : NP_001074666.1

name	Arpc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385866 GeneID:67771 MGI:1915021
definition	GO_component : GO:0005885 - Arp2/3 protein complex [Evidence TAS]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA] GO_process : GO:0030833 - regulation of actin filament polymerization [Evidence IEA] codon_start : 1 exception : mismatches in translation note : actin related protein 2/3 complex, subunit 5 (165 kDa) product : actin related protein 2/3 complex, subunit 5 protein_id : NP_080645.1

name	Ncf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754798 CCDS:CCDS15367.1 GeneID:17970 MGI:97284
definition	GO_component : GO:0001669 - acrosome [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005829 - cytosol [Evidence ISS] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016175 - superoxide-generating NADPH oxidase activity [Evidence ISS] GO_process : GO:0006742 - NADP catabolism [Evidence ISS]; GO:0006801 - superoxide metabolism [Evidence ISS] codon_start : 1 note : NADPH oxidase subunit (67 kD); NADPH oxidase subunit (67kDa) product : neutrophil cytosolic factor 2 protein_id : NP_035007.1

name	Smg7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:53828718 GeneID:226517 MGI:2682334
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0051721 - protein phosphatase 2A binding [Evidence ISS] GO_process : GO:0000184 - mRNA catabolism, nonsense-mediated decay [Evidence IEA] [Evidence ISS]; GO:0006406 - mRNA export from nucleus [Evidence ISS]; GO:0035303 - regulation of dephosphorylation [Evidence ISS]; GO:0006445 - regulation of translation [Evidence ISS] codon_start : 1 product : SMG-7 homolog protein_id : NP_001005507.1

name	LOC668040 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668040
definition	number : 1 pseudo : _no_value

name	LOC668040 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668040
definition	number : 2 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128705
definition	standard_name : D1Mit346

name	(CDS detail)
type	STS
link
xref	UniSTS:128533
definition	standard_name : D1Mit195

name	(CDS detail)
type	STS
link
xref	UniSTS:128642
definition	standard_name : D1Mit289

name	(CDS detail)
type	STS
link
xref	UniSTS:207213
definition	standard_name : BB283688

name	(CDS detail)
type	STS
link
xref	UniSTS:207212
definition	standard_name : AI132432

name	(CDS detail)
type	STS
link
xref	UniSTS:158865
definition	standard_name : AA960440

name	(CDS detail)
type	STS
link
xref	UniSTS:234231
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:207214
definition	standard_name : BB377812

name	(CDS detail)
type	STS
link
xref	UniSTS:165108
definition	standard_name : AW226554

name	(CDS detail)
type	STS
link
xref	UniSTS:158866
definition	standard_name : AI450156

name	(CDS detail)
type	STS
link
xref	UniSTS:210524
definition	standard_name : RH136542

name	(CDS detail)
type	STS
link
xref	UniSTS:178477
definition	standard_name : AI326319

name	(CDS detail)
type	STS
link
xref	UniSTS:499176
definition	standard_name : Cox7b

name	(CDS detail)
type	STS
link
xref	UniSTS:128817
definition	standard_name : D1Mit447

name	(CDS detail)
type	STS
link
xref	UniSTS:210039
definition	standard_name : RH136044

name	(CDS detail)
type	STS
link
xref	UniSTS:234233
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128884
definition	standard_name : D1Mit513

name	(CDS detail)
type	STS
link
xref	UniSTS:165109
definition	standard_name : AV212693

name	(CDS detail)
type	STS
link
xref	UniSTS:122828
definition	standard_name : 05.MMHAP66FLB2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:478939
definition	standard_name : D1Dcr3

name	(CDS detail)
type	STS
link
xref	UniSTS:162235
definition	standard_name : RH125413

name	(CDS detail)
type	STS
link
xref	UniSTS:178478
definition	standard_name : AI427652

name	(CDS detail)
type	STS
link
xref	UniSTS:207228
definition	standard_name : RH126880

name	(CDS detail)
type	STS
link
xref	UniSTS:162998
definition	standard_name : RH126290

name	(CDS detail)
type	STS
link
xref	UniSTS:128871
definition	standard_name : D1Mit501

name	(CDS detail)
type	STS
link
xref	UniSTS:239278
definition	standard_name : D15Mit4

name	(CDS detail)
type	STS
link
xref	UniSTS:142256
definition	standard_name : D1Mit521

name	(CDS detail)
type	STS
link
xref	UniSTS:271393
definition	standard_name : PMC156340P1

name	(CDS detail)
type	STS
link
xref	UniSTS:180601
definition	standard_name : AB002664

name	(CDS detail)
type	STS
link
xref	UniSTS:234234
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128872
definition	standard_name : D1Mit502

name	LOC668076 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234305 GeneID:668076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 9 Proteins product : similar to Rpl7a protein pseudo : _no_value transcript_id : XR_034002.1

name	EG639787 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149234338 GeneID:639787 MGI:3645261
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 112 ESTs, 8 Proteins product : predicted gene, EG639787 pseudo : _no_value transcript_id : XR_002131.2

clone name	MSMg01-438F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059B12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-436I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091P24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-255C12.b	B6Ng01-255C12.g
ACC	GA061433	GA061434
length	499	1,108
definition	B6Ng01-255C12.b	B6Ng01-255C12.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(153,760,835 - 153,761,338)	(153,598,834 - 153,599,947)
sequence	cacagctttgtctcatcagtctccacattgcttttctgtctgtgtacaga tttacatgacagaaaagtacaaagttgatctatgtaggaattaagcaata acttaacctcaaataccagtggaaccaggcaacactgtcaacttacaaat ctgacataacttatgaacactattctaaagaggaatttaaaacgtattgt gctataattaaagtatcacagggcagtctttgagtttcattttttattat tttaccgtgcgtgtgtgtctgtgtgtatgtgtctgtgtgtgtctgtgtgt atgtgtctctgtgtgtgtgtctgtgtgtgtctgtgtgtgtctgtgtgtat gtgtctgtgtctgtgtgtgtgagtctgtgtgtgtgagtctgtgtgtgtgt gtgtgtgtgtgtgtgtgtgtgggcaagtgtatgagtttgtgcatgtgcac atgcattgtgtctttattttagatcattccttagaatctcttcgccttg	gaattcctcattcctttctggagtttggatgagacagtcagccactccag gagacaacccataatatttactcagtacttttcctaaaatataccttctg gaaccttaaagtcccagaatgtaaatgcagaataaacgttgccttgattt aatacacagacttgagttcacaagaagaaaagtgtcctgtaaattccaca ttatcaactgatgggaatattgaaaggagaaggatgggaagtcatttgag gaatgctacaatagccacttccaaatcctattttaggaatacgagacccg tagaattaaagactataggggcaactgctgttctgtgatcagcctcgttc agctgctctcagtctcccgggactctccttgagtcctaagagaactgatg tggagcctctccctggtgtccatatgttttctacccacaatccttcgtag cctctgacacatccaggcaggaaagggaacatatatatttgcgtaagata caaggctgtgtaaacaaactcttagccagttaaagggcaccactttataa actgcccttattaattttaatgggctctacacatctaaaaaactgtttta cattctttaaaaagcccgtctctcttattccccttgggtgctttccacta atattggtttttttttttttctgtacaactccaagctctccaaattaact tccatatcatttaaaaagattactcatgtataagtttgaaaactaacaaa tgaaaaatttcccaggagtccataaattggcaattagctaataattccta ttcccattaatgggttaaaatgggatctactttgaaatgtacttttgtga atgtgtttccatactgaatatgaatctccagcttaggaatgttaactccc aattcctttgaggtcacaccagattttcctatttcggattttgcagaggt tagtgaaacatggactcaactattggctagaagttgaatcacagtggggg aggaaagacgcttattatttcagaagtcacaagaaggtgtctgctactta ttgacagctttaacttcagtgtagctgggaagaccaggcaaaatgcagaa ggataaac
quality values	Open. Hide. 31 18 42 41 62 62 62 62 62 62 62 62 62 41 31 62 47 38 54 62 62 62 62 44 39 43 39 32 32 32 32 45 56 62 62 62 59 59 62 62 62 59 62 62 62 62 62 59 62 59 62 62 62 62 62 59 62 62 59 62 59 59 62 62 62 62 62 62 62 62 59 62 62 42 54 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 42 54 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 56 56 34 48 28 13 13 13 12 13 18 19 13 19 12 10 17 30 16 22 27 13 24 30 13 18 13 11 7 26 10 34 18 23 18 13 18 10 17 18 18 18 19 12 16 16 8 13 11 13 13 17 13 14 27 9 10 11 12 8 10 13 13 10 19 13 11 5 5 13 38 18 13 11 18 16 10 12 12 13 13 10 21 20	Open. Hide. 62 59 51 59 62 62 62 62 59 59 62 56 59 56 48 56 59 48 50 56 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 59 62 62 59 59 62 62 59 62 59 62 62 59 59 62 62 54 54 59 62 62 62 62 59 59 46 54 43 48 62 62 62 62 62 62 62 62 62 59 56 42 62 54 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 62 62 62 62 62 62 62 62 62 62 62 54 54 54 54 54 58 58 58 58 58 58 54 54 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 54 58 58 52 58 58 58 58 54 58 54 58 58 58 58 58 58 58 58 54 58 49 58 46 58 58 42 58 58 58 58 58 54 51 58 58 58 58 58 54 50 58 49 58 58 58 58 58 42 47 58 58 58 51 50 45 58 58 58 49 54 58 58 48 58 58 50 50 41 49 52 58 58 58 58 49 58 58 58 50 58 51 54 58 41 47 50 50 51 58 54 49 53 53 39 51 58 41 34 58 58 58 58 58 58 58 58 58 58 58 50 52 52 51 50 50 49 49 49 49 50 51 39 26 50 50 51 40 50 52 53 51 32 54 45 45 31 33 51 44 51 54 49 32 31 51 34 44 44 42 53 54 45 37 54 42 46 50 32 26 13 24 33 52 53 53 38 42 54 40 39 42 37 47 35 37 54 47 45 40 54 54 51 47 37 33 33 42 42 54 37 35 41 34 53 52 53 36 52 46 33 32 46 32 31 30 53 39 29 32 36 47 27 32 32 53 32 47 32 45 40 33 33 35 36 36 45 30 33 16 9 46 42 33 31 29 30 32 51 21 32 35 45 34 51 19 16 30 37 31 26 31 45 51 32 19 26 31 51 46 28 21 38 46 18 27 31 34 32 29 31 29 48 43 27 27 46 37 29 31 22 26 32 31 48 48 31 42 24 28 42 28 29 39 18 24 8 48 31 37 30 21 31 22 36 22 28 27 31 32 33 32 32 44 23 21 20 15 30 33 19 32 37 30 12 16 6 5 25 28 7 31 20 12 24 17 32 21 20 44 21 22 23 31 37 30 21 31 33 9 4 9 22 33 13 17 13 18 21 31 32 33 19 37 33 47 47 29 18 28 21 27 20 48 19 17 19 8 32 31 48 39 34 23 32 27 14 33 11 24 15 20 33 31 23 16 13 48 15 9 14 34 15 25 8 16 18 32 14 32 32 32 22 14 30 8 25 13 21 21 15 8 23 9 12 15 12 17 11 24 27 20 27 13 6 13 28 38 34 34 11 8 5 15 8 32 30 11 9 13 10 11 20 11 25 17 22 14 9 33 13 16 4 5 3 4 5 11 14 30 14 10 6 11 3 10 21 17 16 24 24 22 6 7 24 10 13 9 16 8 12 8 8 8 14 6 4 8 17 8 29 13 15 18 17 11 11 15 6 4 4 4 3 8 13 20 13 15 26 9 9 6 4 10 6 5 14 9 5 16 11 9 12 5 10 8 7 5 6 17 22 5 7 16 11 18 4 3 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_153760835_153761338
seq2: B6Ng01-255C12.b_48_552 (reverse)

seq1  CAAGGCAGAGAGATTCTGAGGAATGATC-CAGATGGAGACACAATGCATG  49
      ||||||  ||||||||| ||||||||||  | ||  ||||||||||||||
seq2  CAAGGCGAAGAGATTCTAAGGAATGATCTAAAATAAAGACACAATGCATG  50

seq1  TGCACCTGAACAAACTCATGCACTTGTCCACACACACACACACACACACA  99
      ||||| || |||||||||| |||||| |||||||||||||||||||||||
seq2  TGCACATGCACAAACTCATACACTTGCCCACACACACACACACACACACA  100

seq1  CACACACACAGACTCACACACACAGACTCACACACACAGACACAGACACA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACAGACTCACACACACAGACTCACACACACAGACACAGACACA  150

seq1  TACACACAGACACACACAGACACACACAGACACACACACAGAGACACATA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACAGACACACACAGACACACACAGACACACACACAGAGACACATA  200

seq1  CACACAGACACACACAGACACATACACACAGACACACACGCACGGTAAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGACACACACAGACACATACACACAGACACACACGCACGGTAAAA  250

seq1  TAATAAAAAATGAAACTCAAAGACTGCCCTGTGATACTTTAATTATAGCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAAAATGAAACTCAAAGACTGCCCTGTGATACTTTAATTATAGCA  300

seq1  CAATACGTTTTAAATTCCTCTTTAGAATAGTGTTCATAAGTTATGTCAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACGTTTTAAATTCCTCTTTAGAATAGTGTTCATAAGTTATGTCAGA  350

seq1  TTTGTAAGTTGACAGTGTTGCCTGGTTCCACTGGTATTTGAGGTTAAGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAGTTGACAGTGTTGCCTGGTTCCACTGGTATTTGAGGTTAAGTT  400

seq1  ATTGCTTAATTCCTACATAGATCAACTTTGTACTTTTCTGTCATGTAAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTAATTCCTACATAGATCAACTTTGTACTTTTCTGTCATGTAAAT  450

seq1  CTGTACACAGACAGAAAAGCAATGTGGAGACTGATGAGACAAAGCTGTGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACACAGACAGAAAAGCAATGTGGAGACTGATGAGACAAAGCTGTGG  500

seq1  AATTC  504
      |||||
seq2  AATTC  505

seq1: chr1_153598834_153599947
seq2: B6Ng01-255C12.g_65_1172

seq1  GAATTCCTCATTCCTTTCTGGAGTTTGGATGAGACAGTCAGCCACTCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCATTCCTTTCTGGAGTTTGGATGAGACAGTCAGCCACTCCAG  50

seq1  GAGACAACCCATAATATTTACTCAGTACTTTTCCTAAAATATACCTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAACCCATAATATTTACTCAGTACTTTTCCTAAAATATACCTTCTG  100

seq1  GAACCTTAAAGTCCCAGAATGTAAATGCAGAATAAACGTTGCCTTGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTAAAGTCCCAGAATGTAAATGCAGAATAAACGTTGCCTTGATTT  150

seq1  AATACACAGACTTGAGTTCACAAGAAGAAAAGTGTCCTGTAAATTCCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACAGACTTGAGTTCACAAGAAGAAAAGTGTCCTGTAAATTCCACA  200

seq1  TTATCAACTGATGGGAATATTGAAAGGAGAAGGATGGGAAGTCATTTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAACTGATGGGAATATTGAAAGGAGAAGGATGGGAAGTCATTTGAG  250

seq1  GAATGCTACAATAGCCACTTCCAAATCCTATTTTAGGAATACGAGACCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTACAATAGCCACTTCCAAATCCTATTTTAGGAATACGAGACCCG  300

seq1  TAGAATTAAAGACTATAGGGGCAACTGCTGTTCTGTGATCAGCCTCGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTAAAGACTATAGGGGCAACTGCTGTTCTGTGATCAGCCTCGTTC  350

seq1  AGCTGCTCTCAGTCTCCCGGGACTCTCCTTGAGTCCTAAGAGAACTGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTCTCAGTCTCCCGGGACTCTCCTTGAGTCCTAAGAGAACTGATG  400

seq1  TGGAGCCTCTCCCTGGTGTCCATATGTTTTCTACCCACAATCCTTCGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCCTCTCCCTGGTGTCCATATGTTTTCTACCCACAATCCTTCGTAG  450

seq1  CCTCTGACACATCCAGGCAGGAAAGGGAACATATATATTTGCGTAAGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGACACATCCAGGCAGGAAAGGGAACATATATATTTGCGTAAGATA  500

seq1  CAAGGCTGTGTAAACAAACTCTTAGCCAGTTAAAGGGCACCACTTTATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTGTGTAAACAAACTCTTAGCCAGTTAAAGGGCACCACTTTATAA  550

seq1  ACTGCCCTTATTAATTTTAATGGGCTCTACACATCTAAAAAACTGTTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCTTATTAATTTTAATGGGCTCTACACATCTAAAAAACTGTTTTA  600

seq1  CATTCTTTAAAAAGCCCGTCTCTCTTATTCCCCTTGGGTGCTTTCCACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTTAAAAAGCCCGTCTCTCTTATTCCCCTTGGGTGCTTTCCACTA  650

seq1  ATATTGGTTTTTTTTTTTTTCTGTACAACTCCAAGCTCTCCAAATTAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGTTTTTTTTTTTTTCTGTACAACTCCAAGCTCTCCAAATTAACT  700

seq1  TCCATATCATTTAAAAAGATTACTCATGTATAAGTTTGAAAACTAACAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATCATTTAAAAAGATTACTCATGTATAAGTTTGAAAACTAACAAA  750

seq1  TGAAAAATTTCCCAGGAGTCCATAAATTGGCAATTAGCTAATAATTCCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATTTCCCAGGAGTCCATAAATTGGCAATTAGCTAATAATTCCTA  800

seq1  TTCCCATTAATGGGTTAAAATGGGATCTACTTTGAAATGTACTTTTGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATTAATGGGTTAAAATGGGATCTACTTTGAAATGTACTTTTGTGA  850

seq1  ATGTGTTTCCATACTGAATATGAATCTCCAGCTTAGAAATGTTAACTCCC  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATGTGTTTCCATACTGAATATGAATCTCCAGCTTAGGAATGTTAACTCCC  900

seq1  AATTCCTTTTAGGTCACACCAGATTTTCCTATTTCGGATTTTGCAGAGGT  950
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTTTGAGGTCACACCAGATTTTCCTATTTCGGATTTTGCAGAGGT  950

seq1  TAGTGAAACATGGACTCAACTATTGGCTAGAAGTTGAATCACAGTGGGGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TAGTGAAACATGGACTCAACTATTGGCTAGAAGTTGAATCACAGTGGGGG  1000

seq1  GGAAAAGACGCTTATTATTCAGGGAGTCAACAAGGAAGGTGTCCTGCCTA  1050
       | ||||||||||||||||   | |||| |||| |||||||| ||| |||
seq2  AGGAAAGACGCTTATTATTTCAGAAGTC-ACAA-GAAGGTGT-CTG-CTA  1046

seq1  CTTA-TGACAGCCTTTAAAACTTCAGTGTTAGCTGGG-AGACAAGCAAAA  1098
      |||| ||||||| ||   |||||||||| |||||||| |||| ||  |||
seq2  CTTATTGACAGCTTT---AACTTCAGTG-TAGCTGGGAAGACCAGGCAAA  1092

seq1  ATGCAGAAAGATAAAC  1114
      |||||||| |||||||
seq2  ATGCAGAAGGATAAAC  1108

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information