BAC Information

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BAC

Clone NameB6Ng01-255F08
Chromosome1 (Build37)
Map Location 148,855,523 - 149,032,023
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383571, B830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255F08.bB6Ng01-255F08.g
ACCGA061564GA061565
length1,141754
definitionB6Ng01-255F08.b B6Ng01-255F08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,030,878 - 149,032,023)(148,855,523 - 148,856,276)
sequence
gaattcaaaacaatacaaacatttacaaagttacctgatgagttctgccc
acacacctatctcattttactgaacaaaaactgaatcaatgttctttaaa
ttcttgtgtttgaaagaaagaagaccattctataaaagaattgtgtactc
cttaattaaattataaatttccatgttcattctttctatgactcattggc
ctttatctccctgcttctctcatttaaattgaattcacgtaagctttcct
aaaaactcatactggtaattcatttgtaagaacatgcttcataaaagggt
tttgtgaatgtcttcatatcacctgaaacataaagtaatgcaaggattta
aaaaaaaaattagaagaagtgtcagtttcaataacgactttttattcgtg
gactagagtgaaaacttatttttatttcagggatgttatagagttggcac
tttgttaaaacttttaaggactattgaattgtctgtgctaaaattttgaa
taaagaaggataggccagaaggatcacgatgctctcaagtgtggattaga
aaactccagggcatgatgccactgaaatttcactgtggctttatttttga
ctagaatttttactccaggaatttgttactaagtctacaaggtaagataa
tatatttattattttcttgaattgattcatggttttaagtcagctagata
ataatttatgtgcctgagtattagcgttgcctcacggaagaacagaattt
tcctaatgagtaattagaggcatggctttggaagaaatgaatagaaaaga
ttttgtgttctggagcagtacgtgaaaaggaacagggttcaggagataca
ggtagagcttcatgctggaatctgagggatgacagggccaggtcttctct
ctgaatgaagctttatacatttcaccaatttgatctaaaaagcagcacgt
ccagtagtgagaaaaaatgtctcagatacgatcatatctgagttgtgaag
ttccatgggggatgaaaacttcagctcagcacttctttatgagttggtat
tgtaatatatttttggggagaatgtcctaccttttaattactggtaacct
atttcagccagtctttatatgatcctaacttagatcctaac

gaattccttgatccacttagacttgagctttatacaaggagataagaatg
gatcaattcacattcttctacatgctatccatcagttgaaccagcaccat
ttgttgaatagctgttttgctggtggtgcatgcctttaatcccatcactt
gggaggcagaggcaagcgaatttctcagtttgaggccagcctgctctaca
gagtgagttccaggacagccaaggctatacagagaaacccagtcttgaaa
aaccaaaaaaaaaaaaagctgtttttccaatggatggtttctcctataaa
ttctgtggcttaatatagtctaaggagtttgttttcttcctgagtggatc
aaatgttttttattaggcaaaaagtcatatattcacacagtggtggtatt
gaattttaagtgaagtagctgattccacttttgtctctttaataaatatg
atcaataatatctcttgcagaatagcgaacttatttataatttcagtgtt
aggattgccattataagccttaaaaatgacctacaaaatgtaactttagt
gtatattcataaatgtcttctgtggtttgagtcaggttctttcctgttta
gctgttctgttgcatgttctaggctaattcctgtctgcacctgtcatctt
gctgtaggtgtaggagtgttgggattacaaatgcattgcccacatctgga
acatatatatatatatatatatatatatatatatatatatatatatatat
atat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149030878_149032023
seq2: B6Ng01-255F08.b_48_1188 (reverse)

seq1  GTTAGGATCTTAATGTAGGGAATCATATAAAGACT-GCTGAAAATAGTTA  49
      ||||||||| |||  ||||  |||||||||||||| |||||||   ||||
seq2  GTTAGGATC-TAAGTTAGG--ATCATATAAAGACTGGCTGAAATAGGTTA  47

seq1  CCAGTAA-TAAAAAGTAGGAACATTCTCCCCAAAAATATA-TACAATACC  97
      ||||||| ||||| ||||| |||||||||||||||||||| |||||||||
seq2  CCAGTAATTAAAAGGTAGG-ACATTCTCCCCAAAAATATATTACAATACC  96

seq1  AACTCATAAAGAAGTGCTGAGCTGAAAGTTTTCATCCCCCATGGAACTTC  147
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AACTCATAAAGAAGTGCTGAGCTG-AAGTTTTCATCCCCCATGGAACTTC  145

seq1  ACAACTCAGATATGATCGTTATCTGAGACA-TTTTTCTCACCTACTGGAC  196
      |||||||||||||||||| ||||||||||| ||||||||| |||||||||
seq2  ACAACTCAGATATGATCG-TATCTGAGACATTTTTTCTCA-CTACTGGAC  193

seq1  GTGCTGCTTTTTTAGATCAAATTGGTGAAATGTATAAAGCTTCATTCAGA  246
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGC-TTTTTAGATCAAATTGGTGAAATGTATAAAGCTTCATTCAGA  242

seq1  GAGAAGACCTGGCCCTGTCATCCCTCAGATTCCAGCATGAAGCTCTACCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGACCTGGCCCTGTCATCCCTCAGATTCCAGCATGAAGCTCTACCT  292

seq1  GTATCTCCTGAACCCTGTTCCTTTTCACGTACCTGCTCCAGAACACAAAA  346
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTATCTCCTGAACCCTGTTCCTTTTCACGTA-CTGCTCCAGAACACAAAA  341

seq1  TCTTTTCTATTCATTTCTTCCAAAGCCATGCCTCTAATTACTCATTAGGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTATTCATTTCTTCCAAAGCCATGCCTCTAATTACTCATTAGGA  391

seq1  AAATTCTGTTCTTCCGTGAGGCAACGCTAATACTCAGGCACATAAATTAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTGTTCTTCCGTGAGGCAACGCTAATACTCAGGCACATAAATTAT  441

seq1  TATCTAGCTGACTTAAAACCATGAATCAATTCAAGAAAATAATAAATATA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAGCTGACTTAAAACCATGAATCAATTCAAGAAAATAATAAATATA  491

seq1  TTATCTTACCTTGTAGACTTAGTAACAAATTCCTGGAGTAAAAATTCTAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTACCTTGTAGACTTAGTAACAAATTCCTGGAGTAAAAATTCTAG  541

seq1  TCAAAAATAAAGCCACAGTGAAATTTCAGTGGCATCATGCCCTGGAGTTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAATAAAGCCACAGTGAAATTTCAGTGGCATCATGCCCTGGAGTTT  591

seq1  TCTAATCCACACTTGAGAGCATCGTGATCCTTCTGGCCTATCCTTCTTTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATCCACACTTGAGAGCATCGTGATCCTTCTGGCCTATCCTTCTTTA  641

seq1  TTCAAAATTTTAGCACAGACAATTCAATAGTCCTTAAAAGTTTTAACAAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAATTTTAGCACAGACAATTCAATAGTCCTTAAAAGTTTTAACAAA  691

seq1  GTGCCAACTCTATAACATCCCTGAAATAAAAATAAGTTTTCACTCTAGTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAACTCTATAACATCCCTGAAATAAAAATAAGTTTTCACTCTAGTC  741

seq1  CACGAATAAAAAGTCGTTATTGAAACTGACACTTCTTCTAATTTTTTTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAATAAAAAGTCGTTATTGAAACTGACACTTCTTCTAATTTTTTTTT  791

seq1  TAAATCCTTGCATTACTTTATGTTTCAGGTGATATGAAGACATTCACAAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCTTGCATTACTTTATGTTTCAGGTGATATGAAGACATTCACAAA  841

seq1  ACCCTTTTATGAAGCATGTTCTTACAAATGAATTACCAGTATGAGTTTTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTTATGAAGCATGTTCTTACAAATGAATTACCAGTATGAGTTTTT  891

seq1  AGGAAAGCTTACGTGAATTCAATTTAAATGAGAGAAGCAGGGAGATAAAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGCTTACGTGAATTCAATTTAAATGAGAGAAGCAGGGAGATAAAG  941

seq1  GCCAATGAGTCATAGAAAGAATGAACATGGAAATTTATAATTTAATTAAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATGAGTCATAGAAAGAATGAACATGGAAATTTATAATTTAATTAAG  991

seq1  GAGTACACAATTCTTTTATAGAATGGTCTTCTTTCTTTCAAACACAAGAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACACAATTCTTTTATAGAATGGTCTTCTTTCTTTCAAACACAAGAA  1041

seq1  TTTAAAGAACATTGATTCAGTTTTTGTTCAGTAAAATGAGATAGGTGTGT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGAACATTGATTCAGTTTTTGTTCAGTAAAATGAGATAGGTGTGT  1091

seq1  GGGCAGAACTCATCAGGTAACTTTGTAAATGTTTGTATTGTTTTGAATTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAACTCATCAGGTAACTTTGTAAATGTTTGTATTGTTTTGAATTC  1141


seq1: chr1_148855523_148856276
seq2: B6Ng01-255F08.g_67_820

seq1  GAATTCCTTGATCCACTTAGACTTGAGCTTTATACAAGGAGATAAGAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGATCCACTTAGACTTGAGCTTTATACAAGGAGATAAGAATG  50

seq1  GATCAATTCACATTCTTCTACATGCTATCCATCAGTTGAACCAGCACCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAATTCACATTCTTCTACATGCTATCCATCAGTTGAACCAGCACCAT  100

seq1  TTGTTGAATAGCTGTTTTGCTGGTGGTGCATGCCTTTAATCCCATCACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAATAGCTGTTTTGCTGGTGGTGCATGCCTTTAATCCCATCACTT  150

seq1  GGGAGGCAGAGGCAAGCGAATTTCTCAGTTTGAGGCCAGCCTGCTCTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGAGGCAAGCGAATTTCTCAGTTTGAGGCCAGCCTGCTCTACA  200

seq1  GAGTGAGTTCCAGGACAGCCAAGGCTATACAGAGAAACCCAGTCTTGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGTTCCAGGACAGCCAAGGCTATACAGAGAAACCCAGTCTTGAAA  250

seq1  AACCAAAAAAAAAAAAAGCTGTTTTTCCAATGGATGGTTTCTCCTATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAAAAAAAAAAAGCTGTTTTTCCAATGGATGGTTTCTCCTATAAA  300

seq1  TTCTGTGGCTTAATATAGTCTAAGGAGTTTGTTTTCTTCCTGAGTGGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGGCTTAATATAGTCTAAGGAGTTTGTTTTCTTCCTGAGTGGATC  350

seq1  AAATGTTTTTTATTAGGCAAAAAGTCATATATTCACACAGTGGTGGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTTTTATTAGGCAAAAAGTCATATATTCACACAGTGGTGGTATT  400

seq1  GAATTTTAAGTGAAGTAGCTGATTCCACTTTTGTCTCTTTAATAAATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTAAGTGAAGTAGCTGATTCCACTTTTGTCTCTTTAATAAATATG  450

seq1  ATCAATAATATCTCTTGCAGAATAGCGAACTTATTTATAATTTCAGTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATAATATCTCTTGCAGAATAGCGAACTTATTTATAATTTCAGTGTT  500

seq1  AGGATTGCCATTATAAGCCTTAAAAATGACCTACAAAATGTAACTTTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGCCATTATAAGCCTTAAAAATGACCTACAAAATGTAACTTTAGT  550

seq1  GTATATTCATAAATGTCTTCTGTGGTTTGAGTCAGGTTCTTTCCTGTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTCATAAATGTCTTCTGTGGTTTGAGTCAGGTTCTTTCCTGTTTA  600

seq1  GCTGTTCTGTTGCATGTTCTAGGCTAATTCCTGTCTGCACCTGTCATCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTCTGTTGCATGTTCTAGGCTAATTCCTGTCTGCACCTGTCATCTT  650

seq1  GCTGTAGGTGTAGGAGTGTTGGGATTACAAATGCATTGCCCACATCTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGGTGTAGGAGTGTTGGGATTACAAATGCATTGCCCACATCTGGA  700

seq1  ACATATATATATATATATATATATATATATATATATATATATATATATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATATATATATATATATATATATATATATATATATATATATATAT  750

seq1  ATAT  754
      ||||
seq2  ATAT  754


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