BAC Information

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BAC

Clone NameB6Ng01-255K02
Chromosome1 (Build37)
Map Location 10,975,494 - 11,093,557
singlet/doubletdoublet
Overlap genenone
Upstream gene4930418G15Rik, Cops5, Cspp1, Arfgef1, Cpa6, LOC433271
Downstream geneC030045D06Rik, A830018L16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255K02.bB6Ng01-255K02.g
ACCGA061792GA061793
length1,106219
definitionB6Ng01-255K02.b B6Ng01-255K02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,092,436 - 11,093,557)(10,975,494 - 10,975,712)
sequence
gaattctaaacagaaattatcataattatttactggggggctagagttca
gttgtagagcttttccctaacaagtggaagacctgggcttgtgagaataa
ttgagttatattttatgtgtcagctgaaggctaagtaactttccaccaga
ataaaatatttctcctgctagttttgaacaaaatactgcaatcaagtgtc
taatggagtttctgctttttccaggaagcattttttctacacctacagta
tataacaatactaaatatttctgtaattcaagtagaataaaaatttccca
tctagctttccatcataaattctagatatcctcaactcattcaattttga
tcaagataaagcatagctgctgagttggtttggataatcgaaaataagtt
ggatatccagataagcagataagataaacagatatgttccattccttatc
ttaccagcatcctgacagagagagtactaggcagtggacatagtcagtca
ggcccagatcttccagaatcctaggttttcatttaaaaatctgagctcat
tgagaagtaatgaaggttccatgatgggaatgaccagggaagtaagaaag
ggaaaaagctgatgaaccacccaaacagcttgttgaacaggcagcagccc
agttcagtccctgcacactgatgtttcgagccatgtcagcttcccaggca
tggacaccagagcctcctaactgaggattggcccctgctctataccaaac
aacagaatgctccacaatgactttgttctgggatctgggcttgtgtctta
tcttctgaaatattgatggaatttattgcttgtcttcaagatcttgttca
tccttaaaaactctacatttgagttcctaagcaagaggagagggtaggga
cctccacggcttcccatgcactttccttataggaagtgaaaggcatccat
ttgtagcttgaagtactttttttctttcttttatttttttactatcatta
aacataagatcagctttgtctctttgtaaacaattcaagcaatcttttct
tttatgtagtattttattatttaagattcacatcatgcacaatcactgtc
atctca

attcatccaggggccttgggaaaacaataccaggataatcatatctatta
gattctgaagccatcagtccttgattaggatttgaagcagaaggttccat
aaaggcttataaatttaatagaagcaatacaaaaaaaatctagcctaggt
gatgagaactcattaagaaaagttatgtttctcctttccatttaggatcc
atgggggtgggggggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_11092436_11093557
seq2: B6Ng01-255K02.b_46_1151 (reverse)

seq1  TGAGAATGACAGTGATTGGGTGCATGATGTGAAATTCCTAAATAATAAAA  50
      |||| ||||||||||||  ||||||||||||||  || |||||||| |||
seq2  TGAG-ATGACAGTGATT--GTGCATGATGTGAA--TCTTAAATAAT-AAA  44

seq1  ATACTACATTAAAAAAGAAAAGATTTGCCTTTGAAATTTGTTTACAAAGA  100
      |||||||||   ||||||||||| ||||  |||||  |||||||||||||
seq2  ATACTACAT---AAAAGAAAAGA-TTGC--TTGAA--TTGTTTACAAAGA  86

seq1  GACAAAGCTGATCTTATTGTTTTAATGATAGTAAAAAAAATAAAAGAAAG  150
      |||||||||||||||||   |||||||||||| |||||||||||||||||
seq2  GACAAAGCTGATCTTAT--GTTTAATGATAGT-AAAAAAATAAAAGAAAG  133

seq1  AAAAAAAGTACTTCAAGCTACAAATGGATGCCTTTCACTTCCTATAAGG-  199
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAAAAAAGTACTTCAAGCTACAAATGGATGCCTTTCACTTCCTATAAGGA  183

seq1  AAGTGCATGGGAAGCCGTGGAGGTCCCTACCCTCTCCTCTTGCTTAGGAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCATGGGAAGCCGTGGAGGTCCCTACCCTCTCCTCTTGCTTAGGAA  233

seq1  CTCAAATGTAGAGTTTTTAAGGATGAACAAGATCTTGAAGACAAGCAATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATGTAGAGTTTTTAAGGATGAACAAGATCTTGAAGACAAGCAATA  283

seq1  AATTCCATCAATATTTCAGAAGATAAGACACAAGCCCAGATCCCAGAACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCATCAATATTTCAGAAGATAAGACACAAGCCCAGATCCCAGAACA  333

seq1  AAGTCATTGTGGAGCATTCTGTTGTTTGGTATAGAGCAGGGGCCAATCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATTGTGGAGCATTCTGTTGTTTGGTATAGAGCAGGGGCCAATCCT  383

seq1  CAGTTAGGAGGCTCTGGTGTCCATGCCTGGGAAGCTGACATGGCTCGAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAGGAGGCTCTGGTGTCCATGCCTGGGAAGCTGACATGGCTCGAAA  433

seq1  CATCAGTGTGCAGGGACTGAACTGGGCTGCTGCCTGTTCAACAAGCTGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTGTGCAGGGACTGAACTGGGCTGCTGCCTGTTCAACAAGCTGTT  483

seq1  TGGGTGGTTCATCAGCTTTTTCCCTTTCTTACTTCCCTGGTCATTCCCAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGTTCATCAGCTTTTTCCCTTTCTTACTTCCCTGGTCATTCCCAT  533

seq1  CATGGAACCTTCATTACTTCTCAATGAGCTCAGATTTTTAAATGAAAACC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAACCTTCATTACTTCTCAATGAGCTCAGATTTTTAAATGAAAACC  583

seq1  TAGGATTCTGGAAGATCTGGGCCTGACTGACTATGTCCACTGCCTAGTAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATTCTGGAAGATCTGGGCCTGACTGACTATGTCCACTGCCTAGTAC  633

seq1  TCTCTCTGTCAGGATGCTGGTAAGATAAGGAATGGAACATATCTGTTTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGTCAGGATGCTGGTAAGATAAGGAATGGAACATATCTGTTTAT  683

seq1  CTTATCTGCTTATCTGGATATCCAACTTATTTTCGATTATCCAAACCAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTGCTTATCTGGATATCCAACTTATTTTCGATTATCCAAACCAAC  733

seq1  TCAGCAGCTATGCTTTATCTTGATCAAAATTGAATGAGTTGAGGATATCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGCTATGCTTTATCTTGATCAAAATTGAATGAGTTGAGGATATCT  783

seq1  AGAATTTATGATGGAAAGCTAGATGGGAAATTTTTATTCTACTTGAATTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTATGATGGAAAGCTAGATGGGAAATTTTTATTCTACTTGAATTA  833

seq1  CAGAAATATTTAGTATTGTTATATACTGTAGGTGTAGAAAAAATGCTTCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATATTTAGTATTGTTATATACTGTAGGTGTAGAAAAAATGCTTCC  883

seq1  TGGAAAAAGCAGAAACTCCATTAGACACTTGATTGCAGTATTTTGTTCAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAAGCAGAAACTCCATTAGACACTTGATTGCAGTATTTTGTTCAA  933

seq1  AACTAGCAGGAGAAATATTTTATTCTGGTGGAAAGTTACTTAGCCTTCAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGCAGGAGAAATATTTTATTCTGGTGGAAAGTTACTTAGCCTTCAG  983

seq1  CTGACACATAAAATATAACTCAATTATTCTCACAAGCCCAGGTCTTCCAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACATAAAATATAACTCAATTATTCTCACAAGCCCAGGTCTTCCAC  1033

seq1  TTGTTAGGGAAAAGCTCTACAACTGAACTCTAGCCCCCCAGTAAATAATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGGGAAAAGCTCTACAACTGAACTCTAGCCCCCCAGTAAATAATT  1083

seq1  ATGATAATTTCTGTTTAGAATTC  1122
      |||||||||||||||||||||||
seq2  ATGATAATTTCTGTTTAGAATTC  1106


seq1: chr1_10975494_10975712
seq2: B6Ng01-255K02.g_72_290

seq1  ATTCATCCAGGGGCCTTGGGAAAACAATACCAGGATAATCATATCTATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCCAGGGGCCTTGGGAAAACAATACCAGGATAATCATATCTATTA  50

seq1  GATTCTGAAGCCATCAGTCCTTGATTAGGATTTGAAGCAGAAGGTTCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGAAGCCATCAGTCCTTGATTAGGATTTGAAGCAGAAGGTTCCAT  100

seq1  AAAGGCTTATAAATTTAATAGAAGCAATACAAAAAAAATCTAGCCTAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTTATAAATTTAATAGAAGCAATACAAAAAAAATCTAGCCTAGGT  150

seq1  GATGAGAACTCATTAAGAAAAGTTATGTTTCTCCTTTCCATTTAGGATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGAACTCATTAAGAAAAGTTATGTTTCTCCTTTCCATTTAGGATCC  200

seq1  ATGGGGGTGGGGGGGTGGG  219
      |||||||||||||||||||
seq2  ATGGGGGTGGGGGGGTGGG  219


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