BAC Information

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BAC

Clone NameB6Ng01-255K09
ChromosomeX (Build37)1 (Build37)
Map Location 134,172,144 - 134,172,31430,319,330 - 30,319,916
singlet/doubletsingletsinglet
Overlap geneIl1rapl2
Upstream geneTceal3, Tceal1, Morf4l2, BC065397, Glra4, LOC100041122, Plp1, Rab9b, 1700014N06Rik, LOC621984, LOC100034363, 4930488E11Rik, LOC666244, 2810402A17Rik, Zcchc18, BC031748, LOC666277, LOC436231, LOC666288, LOC100041260, LOC100041272, LOC669737, Esx1, EG666303
Downstream gene1700025D03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255K09.bB6Ng01-255K09.g
ACCGA061806GA061807
length985614
definitionB6Ng01-255K09.b B6Ng01-255K09.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(134,172,144 - 134,172,314)(30,319,330 - 30,319,916)
sequence
gaattctgagtttgaggccagcctggtctacagagtgagttccaggacag
ccagggctatacagaaaaaccctgtctcaaaaaaccaaccaaccaaccaa
ccaaccaaccaaccaacaaaacaaaacaaaacaaaacaaaacaaaacaaa
acaaaacaaaacaaaacaaaacaaaacaaaaaactaaaaacaacaacaac
aacaaaaaaaagcccttggtgtgactctaactaaggaagtgaaagatctg
tttaataagaacttcaagtttctgaagaaagaaatcgaagaagatctcag
aagatggaaagatctcccatgctcatggattggcaggattaatatagtaa
aaatggccatcatgctgaaagcaatctacagattcaatgcaatttcgttc
aaaattccaattcaattcttcacagagttagaaagggtaatttacaagtt
catctggaataacaaaatgcctaggataccaaaaactattctcaagaaca
aaagaacccctggtggaatcaccatgcctgacttcaagctgtactacaga
gcaattgtgataaaaactgcatggtactggtacagcaacagagaagtaga
tcaatggaatacaattgaagacccagaaatgaacccacacacctatcatc
acttgatctttgacaaaggaactaaaaccgtctattgaaaaagagatagc
atttttcaacaaatggtgctggctcaactggcggttatcatgtagaagaa
tagaaattgttccatttttatctctgtgtacaaagcttaagtctaagtga
ttcaatgaactacacataaaaccagagacactgaaacttatagagaagaa
agtggggaaaagcctcgaagataagagcatagaggaaaaattcctgaaag
aacaccaatggcttgtgcattaagatcgagaatcaacaaatgggaactca
taaaattgcaagcttctttaaggcagagacactgt
gaattcatgatggaagagatgagctgaggtttgagacagttggcagcaga
cccacggagacttctgttctgagaggggaaggagctagtgttggcagttc
ctgtgtggctctgctccacagttacctggcaacagccaggtgtgctctgc
ccacagttacctggcaaaagcctgactcactataaaagggcctgcttgcc
ctctcctcattctcttgctcttgttctctcctcctgttcttgccattccc
ctccctgccctgtctccctctttctctccctttctctccatgtgctcatg
gccctcctctcttctccctccctccctccctcccttcctccctccctctc
tccctccttctctcccactcccttctctcctcctctcttctctcccctcc
cctcccctcttctccctctttcccttcctcttccttcccctccctcccct
ccctcttctctctgtctctctgtctgtctctctgtctgtctccctctctg
tctctctctgtctctctgtctctgtctctctctctctctctgtctctgtc
tgtctctctctctctctctctctctctctagctttctctcaactcccctc
cccatgccctgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_134172144_134172314
seq2: B6Ng01-255K09.b_54_218

seq1  TGAGTTTGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGG  50

seq1  CTACACAGAGAAACCCTGTCTCAAAAAACCAACTAACCAACCAACCAACC  100
      ||| ||||| ||||||||||||||||||||||| ||||||||||||||||
seq2  CTATACAGAAAAACCCTGTCTCAAAAAACCAACCAACCAACCAACCAACC  100

seq1  AACCAACAAAC-AAACAAA--CAAACAAACTTTCCCCTCCAAAACAAAAA  147
      ||||||| ||| |||||||   |||||||          |||||||||| 
seq2  AACCAACCAACAAAACAAAACAAAACAAA---------ACAAAACAAAAC  141

seq1  AAAAAAAAAAAAAACAAAACAAAA  171
      |||| |||| ||||||||||||||
seq2  AAAACAAAACAAAACAAAACAAAA  165

seq1: chr1_30319330_30319916
seq2: B6Ng01-255K09.g_70_656

seq1  GAATTCATGATGGAAGAGATGAGCTGAGGTTTGAGACAGTTGGCAGCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGATGGAAGAGATGAGCTGAGGTTTGAGACAGTTGGCAGCAGA  50

seq1  CCCACGGAGACTTCTGTTCTGAGAGGGGAAGGAGCTAGTGTTGGCAGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACGGAGACTTCTGTTCTGAGAGGGGAAGGAGCTAGTGTTGGCAGTTC  100

seq1  CTGTGTGGCTCTGCTCCACAGTTACCTGGCAACAGCCAGGTGTGCTCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGGCTCTGCTCCACAGTTACCTGGCAACAGCCAGGTGTGCTCTGC  150

seq1  CCACAGTTACCTGGCAAAAGCCTGACTCACTATAAAAGGGCCTGCTTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTTACCTGGCAAAAGCCTGACTCACTATAAAAGGGCCTGCTTGCC  200

seq1  CTCTCCTCATTCTCTTGCTCTTGTTCTCTCCTCCTGTTCTTGCCATTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTCATTCTCTTGCTCTTGTTCTCTCCTCCTGTTCTTGCCATTCCC  250

seq1  CTCCCTGCCCTGTCTCCCTCTTTCTCTCCCTTTCTCTCCATGTGCTCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGCCCTGTCTCCCTCTTTCTCTCCCTTTCTCTCCATGTGCTCATG  300

seq1  GCCCTCCTCTCTTCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCCTCTCTTCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCTC  350

seq1  TCCCTCCTTCTCTCCCACTCCCTTCTCTCCTCCTCTCTTCTCTCCCCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCTTCTCTCCCACTCCCTTCTCTCCTCCTCTCTTCTCTCCCCTCC  400

seq1  CCTCCCCTCTTCTCCCTCTTTCCCTTCCTCTTCCTTCCCCTCCCTCCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCTCTTCTCCCTCTTTCCCTTCCTCTTCCTTCCCCTCCCTCCCCT  450

seq1  CCCTCTTCTCTCTGTCTCTCTGTCTGTCTCTCTGTCTGTCTCCCTCTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTCTCTCTGTCTCTCTGTCTGTCTCTCTGTCTGTCTCCCTCTCTG  500

seq1  TCTCTCTCTGTCTCTCTGTCTCTGTCTCTCTCTCTCTCTCTGTCTCTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTGTCTCTCTGTCTCTGTCTCTCTCTCTCTCTCTGTCTCTGTC  550

seq1  TGTCTCTCTCTCTCTCTCTCTCTCTCTCTAGCTTTCT  587
      |||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTCTCTCTCTCTCTCTCTCTCTCTAGCTTTCT  587