BAC Information

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BAC

Clone NameB6Ng01-255N16
Chromosome1 (Build37)
Map Location 102,807,340 - 102,808,365
singlet/doubletsinglet
Overlap genenone
Upstream geneC230078M14Rik, EG666200
Downstream geneLOC100041909, LOC100040993, LOC383650
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255N16.bB6Ng01-255N16.g
ACCGA061960GA061961
length1,0281,033
definitionB6Ng01-255N16.b B6Ng01-255N16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagaaaatctatccttccttgcaggttaagagggagtatttagg
cacacttgtagaatcacaccatcatggaacacggtctatcaacagacaga
acaggccagatatcactgtggcttaacccagaataaaggtcagtgtgata
tgtgggctagagatggtcaccaaggcaggtataacataaacaggctggac
taacaggctataggggagagacattctcccaaatcagaagtattggagta
tgaagcccaaggacaaagtgaaggaacaaatcccttgaatcaacgatgct
tcaaagcggtgaccagacccatacctgatgactttgatgatacctccttg
aacaaatcagatcctagtctcttgcagcatcagtcccagtggtaaggcac
tttgatgagactactcctggggacacattagcaacatatatattgcaaat
caaataggacaccaatggcaaaccacagtccaactcagtgaaatgattag
tttattgaacttagttatgaagtatggacatggggttatttataggaaca
tggacaactcaaagatagctgtaccaacagaaagcccaccccagatggat
gacacaaaacgattggagctatctttcctagttacaggcaacttgaatgt
taagaaattctcctcctgagcaattgttgctgctcataaaatcttgaaac
taggattgtgaagagtataaatttcatggacttgttaatacttgtgattt
gcttgcctcctgagcctttaagcatcttttatttcctgaatcttgacaag
ccttgctgctactatacaacaggcactgactggaaaagcacagattgatg
aaatctgcagccatggaatctagaaaatactaatgatctcctaaacaagg
tctgcacaattacaatgccagctgccataacaaaatggggtggaggaaat
ctcactaagatccaccaatgagtgaaaagatgttagtaaatatgctacag
agagaagatcagtcttctttacgatagc

gaattctttgggtttttttttggtgattaacttcttgagttccttattta
ttttggatattagccctctattgaatgtgtagttagtgcagggttttgtt
ttgttttgtttccccaatctgtaggttgctgatcttagagcatgagccac
tggaattctgtttaggaaatttccccctgtgccaatgagttcaagcctct
tttccactttctcttctattagattctgtatatctggttgtatgttgagt
tccttgatccacttggacattagcttcgtaaaaggtgacacatatgggtc
taatttcattcttctacacacagatagccagttagacatccaccatttat
tgaagatgctttcttttttccattgtatatttttggcgcctttgtcaaaa
atcaagtgacgttaagtgtgtggttttatttctgggtcttcaattctatt
ccattgatcaacatgtctgtctctgtaccaattccatagtttttattact
attgctctgtagtaaagcttgagttcagggatgaatcatctgggtgattc
cccccagatgttctcttattgttaaaaattgtttttgctattctaggttt
tttgcctttccagatgaatttgggagttgctctttctgggtgtttgagga
attgtgttgggattttgatggggattgcattgaatctatagatttgcctc
tggtaggatggccatttttactatgctaactctttccaatccatgagcat
ggaaaatatctccattttctgagatattcttcaatttctttcttgagaga
tttgaagttttgtcatataggtctttctcttgtttggttagagtttcccc
aagatattttatgctgtttgtggcgacggtgaaggggaatagtttcccta
atttctttctcagcctgtttatcctttgtgtaaaggaagaatactgattt
atttgagttaattatatctagccactttgctgaagttgattaccagctgg
agaagtctctggtagaacttatgggttgcctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_102807340_102808365
seq2: B6Ng01-255N16.b_47_1067 (reverse)

seq1  TAAAGAAGACTGATTCTTTCTCTTCCTGTAGCAATTATTTACTAACATCT  50
      ||||||||||||||   ||||||  ||||||||  |||||||||||||||
seq2  TAAAGAAGACTGAT--CTTCTCT--CTGTAGCA--TATTTACTAACATCT  44

seq1  TTTCACTCATTGGTGGATCTTAGTGAGATTTCCTCCA-CCCATTTTGTTA  99
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTCACTCATTGGTGGATCTTAGTGAGATTTCCTCCACCCCATTTTGTTA  94

seq1  TGGCAGCTGGCATTGTAATTGTGCAGACCTTGTTTAGGAGATCATTAGTA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCTGGCATTGTAATTGTGCAGACCTTGTTTAGGAGATCATTAGTA  144

seq1  TTTTCTAGATTCCATGGCTGCAGATTTCATCAATCTGTGCTTTTCCAGTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAGATTCCATGGCTGCAGATTTCATCAATCTGTGCTTTTCCAGTC  194

seq1  AGTGCCTGTTGTATAGTAGCAGCAAGGCTTGTCAAGATTCAGGAAATAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTGTTGTATAGTAGCAGCAAGGCTTGTCAAGATTCAGGAAATAAA  244

seq1  AGATGCTTAAAGGCTCAGGAGGCAAGCAAATCACAAGTATTAACAAGTCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTTAAAGGCTCAGGAGGCAAGCAAATCACAAGTATTAACAAGTCC  294

seq1  ATGAAATTTATACTCTTCACAATCCTAGTTTCAAGATTTTATGAGCAGCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTTATACTCTTCACAATCCTAGTTTCAAGATTTTATGAGCAGCA  344

seq1  ACAATTGCTCAGGAGGAGAATTTCTTAACATTCAAGTTGCCTGTAACTAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTGCTCAGGAGGAGAATTTCTTAACATTCAAGTTGCCTGTAACTAG  394

seq1  GAAAGATAGCTCCAATCGTTTTGTGTCATCCATCTGGGGTGGGCTTTCTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATAGCTCCAATCGTTTTGTGTCATCCATCTGGGGTGGGCTTTCTG  444

seq1  TTGGTACAGCTATCTTTGAGTTGTCCATGTTCCTATAAATAACCCCATGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTACAGCTATCTTTGAGTTGTCCATGTTCCTATAAATAACCCCATGT  494

seq1  CCATACTTCATAACTAAGTTCAATAAACTAATCATTTCACTGAGTTGGAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACTTCATAACTAAGTTCAATAAACTAATCATTTCACTGAGTTGGAC  544

seq1  TGTGGTTTGCCATTGGTGTCCTATTTGATTTGCAATATATATGTTGCTAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTGCCATTGGTGTCCTATTTGATTTGCAATATATATGTTGCTAA  594

seq1  TGTGTCCCCAGGAGTAGTCTCATCAAAGTGCCTTACCACTGGGACTGATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCCCAGGAGTAGTCTCATCAAAGTGCCTTACCACTGGGACTGATG  644

seq1  CTGCAAGAGACTAGGATCTGATTTGTTCAAGGAGGTATCATCAAAGTCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAGAGACTAGGATCTGATTTGTTCAAGGAGGTATCATCAAAGTCAT  694

seq1  CAGGTATGGGTCTGGTCACCGCTTTGAAGCATCGTTGATTCAAGGGATTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTATGGGTCTGGTCACCGCTTTGAAGCATCGTTGATTCAAGGGATTT  744

seq1  GTTCCTTCACTTTGTCCTTGGGCTTCATACTCCAATACTTCTGATTTGGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTCACTTTGTCCTTGGGCTTCATACTCCAATACTTCTGATTTGGG  794

seq1  AGAATGTCTCTCCCCTATAGCCTGTTAGTCCAGCCTGTTTATGTTATACC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTCTCTCCCCTATAGCCTGTTAGTCCAGCCTGTTTATGTTATACC  844

seq1  TGCCTTGGTGACCATCTCTAGCCCACATATCACACTGACCTTTATTCTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGGTGACCATCTCTAGCCCACATATCACACTGACCTTTATTCTGG  894

seq1  GTTAAGCCACAGTGATATCTGGCCTGTTCTGTCTGTTGATAGACCGTGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGCCACAGTGATATCTGGCCTGTTCTGTCTGTTGATAGACCGTGTT  944

seq1  CCATGATGGTGTGATTCTACAAGTGTGCCTAAATACTCCCTCTTAACCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATGGTGTGATTCTACAAGTGTGCCTAAATACTCCCTCTTAACCTG  994

seq1  CAAGGAAGGATAGATTTTCTGGAATTC  1026
      |||||||||||||||||||||||||||
seq2  CAAGGAAGGATAGATTTTCTGGAATTC  1021


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