BAC Information

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BAC

Clone NameB6Ng01-256B19
Chromosome1 (Build37)
Map Location 101,992,597 - 101,993,713
singlet/doubletsinglet
Overlap geneC230078M14Rik
Upstream geneLOC633295
Downstream geneEG666200
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256B19.bB6Ng01-256B19.g
ACCGA062154GA062155
length1,0131,114
definitionB6Ng01-256B19.b B6Ng01-256B19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtatagatttgtggtccatttttaatggggttatttgattt
tctggagtccaccttcatgagttctttatagatattggatattagtcccc
tatctgatttaggattggtaaagatcctttcctagtctgttggtggcctt
tttgtcttattgacagtgtcttttgccttacaggagctttacaattctcg
atcttgcagcacaagccattgctgttctattcagaattttttccctgtgc
ccatatctttgaggcttttccccacattctcctctataagtttcactgtc
tctgtttttttttaatattttttattattacgtattttcctcaattacat
ttagaatgctatccccaaatcccccataccctctcccccacttccctacc
caccaattcctgttttttggccctggcattcccctgtactggggcatata
aagtttgcatgtctaatgggcctctctttcaagtgatggccaactaggcc
atcttttgaaacatatgcagctagaatcaagagctctggggtactggtta
gttcataatgttgttgcacctacagggttgcagatctctttgctccttag
atactttctctagctcctccattgggggccctgtcctctatccaatagct
gactgtgagcatccacttatgtgtttgctaggccccagcatagtctcaca
agagacagctatatcagggtcctttcagccaacccttgctagtgtataca
atggtcttatcgtttggaggctaattatgggatggatccctggatatggc
attctctagacggtccatccttttgtctcagctccaaactttgtctctgt
tactccttccatgggtgattgtttccaattctaagaaggggcaagtgtcc
acatttgttcttcgttcttcttcaatttcatgtgttttgcaaattgtatc
ttatatctcgggtatactaagtttctgggctaatatcacttatcagtgag
tacatattgttgc

gaattcagtgatgaagaagttgtgtacagaagggccagtagatgttcagt
ggataaaagcattagacataatggctccacaacccaagtttcattccttg
ttgttgaaaacaaaacaaaaaacaaacaaacaataaaaacaaaacaagaa
aacagaaaaccagcaacaatacaaaactaagggtaatgaggtaaggtaca
tctgtggtcggtactactacaaacagatgttaggccaggccaggagaaac
atccacaaactcagcagccagctagtctggagttgtaatgtaatagctaa
cttgaaagagacctgtctccagctgaaaagtaaactactaaaagttgtct
tctgacctccaaaggcacgatatggcatgtccacacatgtgtgcatacac
atacacacacacacacacacacacacacacacacacacacacacacacac
acgcacacacgcacacacacatacacaaagattaagaacagaacaacatc
ctaatggtagatgaatggtattattacaagacgttagttttctttactct
ctatactgtcagaaaagtaacagaaagaatttatgatggatatagaaaag
aacaaagtatctgttgggaatattgacactgctgtgcaagacaagaggat
agtacctattctttcatttgcctcaccctcattaaggagtaaccaggttt
gtttgtttgtttgtttgtttgtttgttttttcattgcttcaaaatgccat
attacctaggactcttttcgcttgtatcactctcctgttggttttctccg
gcttctctcttcctttctcatttcttgtctctctcctctttcctctctgt
ccactctcttctctctcctctgtcttctctcccttctctcctctctctct
tctttttcctctctctcttctgtctcctccctcctcatctccattttctc
tcttctttccctgtatcctgtatgtattgccaatctgttgctctccccta
ctctctctgatgtaaatgttatagagaacaccttctccaacaacagcatc
ttctcttccattattaggtcaggactgaacacttttgtcctttgcctttg
tcgaatccttttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_101992597_101993713
seq2: B6Ng01-256B19.g_64_1177 (reverse)

seq1  GCAAAAGATCTGGACAAA-GCAAAG--CAAAAGTTGTTCATGTCTGA-CT  46
      |||||||   | |||||| ||||||  |||||| ||||||   |||| ||
seq2  GCAAAAGGATTCGACAAAGGCAAAGGACAAAAG-TGTTCAGTCCTGACCT  49

seq1  AATAATGGGAGAGAGGATGCTGTTGTTGGGAGAAGGTGTTCTCCTATAAC  96
      |||||||| ||||| |||||||||||| |||||||||||||| |||||||
seq2  AATAATGGAAGAGAAGATGCTGTTGTT-GGAGAAGGTGTTCT-CTATAAC  97

seq1  ATTTTACATTCAAGAGAGAGTAGGGGAGAGCAACAGATTGGCAATACATA  146
      | |||||||   ||||||||||||||||||||||||||||||||||||||
seq2  A-TTTACAT--CAGAGAGAGTAGGGGAGAGCAACAGATTGGCAATACATA  144

seq1  CAGGATACAGGGAAAAGAAGAGAGAAAATGGAGATGAGGAGGGAGGAGAC  196
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CAGGATACAGGG-AAAGAAGAGAGAAAATGGAGATGAGGAGGGAGGAGAC  193

seq1  AGAAGAGAGAGAGGAAAAAGAAGAGAGAGAGGAGAGAAGGGAGAGAAGAC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGAGAGAGGAAAAAGAAGAGAGAGAGGAGAGAAGGGAGAGAAGAC  243

seq1  AGAGGAGAGAGAAGAGAGTGGACAGAGAGGAAAGAGGAGAGAGACAAGAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGAGAGAAGAGAGTGGACAGAGAGGAAAGAGGAGAGAGACAAGAA  293

seq1  ATGAGAAAGGAAGAGAGAAGCCGGAGAAAACCAACAGGAGAGTGATACAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAAGGAAGAGAGAAGCCGGAGAAAACCAACAGGAGAGTGATACAA  343

seq1  GCGAAAAGAGTCCTAGGTAATATGGCATTTTGAAGCAATGAAAAAACAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAAAAGAGTCCTAGGTAATATGGCATTTTGAAGCAATGAAAAAACAAA  393

seq1  CAAACAAACAAACAAACAAACAAACCTGGTTACTCCTTAATGAGGGTGAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACAAACAAACAAACAAACCTGGTTACTCCTTAATGAGGGTGAG  443

seq1  GCAAATGAAAGAATAGGTACTATCCTCTTGTCTTGCACAGCAGTGTCAAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGAAAGAATAGGTACTATCCTCTTGTCTTGCACAGCAGTGTCAAT  493

seq1  ATTCCCAACAGATACTTTGTTCTTTTCTATATCCATCATAAATTCTTTCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAACAGATACTTTGTTCTTTTCTATATCCATCATAAATTCTTTCT  543

seq1  GTTACTTTTCTGACAGTATAGAGAGTAAAGAAAACTAACGTCTTGTAATA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTTTTCTGACAGTATAGAGAGTAAAGAAAACTAACGTCTTGTAATA  593

seq1  ATACCATTCATCTACCATTAGGATGTTGTTCTGTTCTTAATCTTTGTGTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATTCATCTACCATTAGGATGTTGTTCTGTTCTTAATCTTTGTGTA  643

seq1  TGTGTGTGTGCGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGCGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  693

seq1  TGTGTGTGTGTGTGTGTGTATGTGTATGCACACATGTGTGGACATGCCAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTATGTGTATGCACACATGTGTGGACATGCCAT  743

seq1  ATCGTGCCTTTGGAGGTCAGAAGACAACTTTTAGTAGTTTACTTTTCAGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTGCCTTTGGAGGTCAGAAGACAACTTTTAGTAGTTTACTTTTCAGC  793

seq1  TGGAGACAGGTCTCTTTCAAGTTAGCTATTACATTACAACTCCAGACTAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACAGGTCTCTTTCAAGTTAGCTATTACATTACAACTCCAGACTAG  843

seq1  CTGGCTGCTGAGTTTGTGGATGTTTCTCCTGGCCTGGCCTAACATCTGTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGCTGAGTTTGTGGATGTTTCTCCTGGCCTGGCCTAACATCTGTT  893

seq1  TGTAGTAGTACCGACCACAGATGTACCTTACCTCATTACCCTTAGTTTTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTAGTACCGACCACAGATGTACCTTACCTCATTACCCTTAGTTTTG  943

seq1  TATTGTTGCTGGTTTTCTGTTTTCTTGTTTTGTTTTTATTGTTTGTTTGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTGCTGGTTTTCTGTTTTCTTGTTTTGTTTTTATTGTTTGTTTGT  993

seq1  TTTTTGTTTTGTTTTCAACAACAAGGAATGAAACTTGGGTTGTGGAGCCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTGTTTTCAACAACAAGGAATGAAACTTGGGTTGTGGAGCCA  1043

seq1  TTATGTCTAATGCTTTTATCCACTGAACATCTACTGGCCCTTCTGTACAC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCTAATGCTTTTATCCACTGAACATCTACTGGCCCTTCTGTACAC  1093

seq1  AACTTCTTCATCACTGAATTC  1117
      |||||||||||||||||||||
seq2  AACTTCTTCATCACTGAATTC  1114


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