BAC Information

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BAC

Clone NameB6Ng01-257A20
Chromosome1 (Build37)
Map Location 153,306,985 - 153,307,657
singlet/doubletsinglet
Overlap genenone
Upstream geneEG625534, EG545370, LOC668040, LOC676758, EG668050, LOC668055, 3110040M04Rik, LOC100043286, Ivns1abp, 1200016B10Rik, 1190005F20Rik
Downstream geneRnf2, Niban, Edem3, 1700025G04Rik, LOC668076, 5730449L18Rik, Glt25d2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257A20.bB6Ng01-257A20.g
ACCGA062849GA062850
length6751,175
definitionB6Ng01-257A20.b B6Ng01-257A20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactatgtagactaggctggcctcatgatatatcatgggttataa
ggtagggtttatgaatttgtcacagagtaactaaaccttttagtgaggta
ttaaaagggtcaccagccaaggcagcaagcataagtaaggggctccttga
gtttgtgctcattcattcaccaagtttgaaaattcccaatgctgctctca
ggtccagctcttcccccatccagctgtccccgtgagaccctacatcccac
aagacaacagtttagccaattttcttttttctttcctttttttttgtttt
ttttgtttttgtttttgtagaggtggggggtttcaagacagggtttctct
gtgtaaccctggctgtcctggaactcactctgtagaccagggtggcctcg
aactcagaaattcgcctgcctctgcctcccaagtgctgggatcaaaggcg
tgggccaccactgcacagctgccaattttcaagtttagctatgtgtttcc
aaacttggccttaaaactacaagatgatttaaaaatgtgcatctcactag
ttttagagcatgttttgagaatctgagtatctatcattaggaaataaggt
ttccaggctggagagatggttcacctaactgctgactgcttcttccagag
tttctgagttcaatttccagccacc
gaattcttgctgagctaaaatgaggacttgagtctgaatcccagcataca
agtacacacaactggatgggccgatgggcgtgtgcgcctgaaccccaggg
caggggcagggcagggtgcagagacaagaggatcactgggtcactggttg
tcagtctaactaaaacgtgttaacaggttcagagtgggaagtgatggggg
aagacgctcaatgtcccttgtgctggctaggttttacataaactagagtc
acctaagaagagaggtcctcaattgaggaagtattccatcagattgtctt
aggaccacagcacgtctgtaggatatcttcttaattgttaatagatatag
aagaactcagcccatcgtgggctgtgccatccccgggcagtggtcctgag
ttgtgtaagaaagcaatcagagcaagcaattggaaagcaacacaataaac
ggcattcttccatggtttctgcttcagcgcccacctccaggttcctgcct
tgacttcctgccctgacttcccttagtgataaactgtggttgaaatacgc
aaaccaaatatatcctctcttccccaagttgcttttactcatgatattac
aacaacaaaaagcaaaaataggacattcccatagccttactcccaaccat
gtacacacacacacatacagtacactcatacacacatttacatatacaac
taaaatttgtttaaataaaaaagcagatcatctagatctgagatataaaa
caaaaacactcagtaaatgttttaatttctactctggggtaagttacagg
aatgaatttatagaagacagtctcagcaatttaaaagaacattagctatc
acatttcttcatctgagacatttgcttgctgggtacacagtgggcactta
ataaatgtcaactttttactattgccattattcatgtctcacgtagagag
cttattccagctattcttaattaaagaatctgaacatctcagttgggttt
acacaggccttaagtcatgctccaaaatcttaatttacttaacattaaac
caggacatttccactcctgtaccaattaatcaatctctcaacacagccaa
ttcaatagtataactccagaatttaccatgcatgtgctaataaatcaatc
ataatctaaagctaagcctggtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_153306985_153307657
seq2: B6Ng01-257A20.b_47_721

seq1  GAATTCACTATGTAGACTAGGCTGGCCTCATGATATATCATGGGTTATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTAGACTAGGCTGGCCTCATGATATATCATGGGTTATAA  50

seq1  GGTAGGGTTTATGAATTTGTCACAGAGTAACTAAACCTTTTAGTGAGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGGTTTATGAATTTGTCACAGAGTAACTAAACCTTTTAGTGAGGTA  100

seq1  TTAAAAGGGTCACCAGCCAAGGCAGCAAGCATAAGTAAGGGGCTCCTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGGGTCACCAGCCAAGGCAGCAAGCATAAGTAAGGGGCTCCTTGA  150

seq1  GTTTGTGCTCATTCATTCACCAAGTTTGAAAATTCCCAATGCTGCTCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGCTCATTCATTCACCAAGTTTGAAAATTCCCAATGCTGCTCTCA  200

seq1  GGTCCAGCTCTTCCCCCATCCAGCTGTCCCCGTGAGACCCTACATCCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAGCTCTTCCCCCATCCAGCTGTCCCCGTGAGACCCTACATCCCAC  250

seq1  AAGACAACAGTTTAGCCAATTTTCTTTTTTCTTTCCTTTTTTTTTGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAACAGTTTAGCCAATTTTCTTTTTTCTTTCCTTTTTTTTTGTTTT  300

seq1  TTTTGTTTTTGTTTTTGTAGAGGTGGGGGGTTTCAAGACAGGGTTTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTGTTTTTGTAGAGGTGGGGGGTTTCAAGACAGGGTTTCTCT  350

seq1  GTGTAACCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGGTGGCCTCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAACCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGGTGGCCTCG  400

seq1  AACTCAGAAATTCGCCTGCCTCTGCCTCCCAAGTGCTGGGATCAAAGGCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGAAATTCGCCTGCCTCTGCCTCCCAAGTGCTGGGATCAAAGGCG  450

seq1  TGGGCCACCACTGCACAGCTGCCAATTTTCAAGTTTAGCTATGTGTTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCACCACTGCACAGCTGCCAATTTTCAAGTTTAGCTATGTGTTTCC  500

seq1  AAACTTGGCCTTAAAACTACAAGATGATTTAAAAATGTGCATCTCACTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGGCCTTAAAACTACAAGATGATTTAAAAATGTGCATCTCACTAG  550

seq1  TTTTAGAGCATGTTTTGAGAATCTGAGTATCTATCATTAGGAAATAAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAGCATGTTTTGAGAATCTGAGTATCTATCATTAGGAAATAAGGT  600

seq1  TTCCAGGCTGGAGAGATGGTTCAGCTAACTGCTGACTGC-TCTTCCAGAG  649
      ||||||||||||||||||||||| ||||||||||||||| ||||||||||
seq2  TTCCAGGCTGGAGAGATGGTTCACCTAACTGCTGACTGCTTCTTCCAGAG  650

seq1  -TCCTGAGTTCAATTTCCAGCCACC  673
       | ||||||||||||||||||||||
seq2  TTTCTGAGTTCAATTTCCAGCCACC  675