BAC Information

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BAC

Clone NameB6Ng01-257F17
Chromosome1 (Build37)
Map Location 12,081,152 - 12,082,288
singlet/doubletsinglet
Overlap genenone
Upstream geneC030045D06Rik, A830018L16Rik
Downstream geneLOC665262, LOC100039709, LOC621353, LOC100039733, Sulf1, Slco5a1, LOC383490
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257F17.bB6Ng01-257F17.g
ACCGA063078GA063079
length1,1321,180
definitionB6Ng01-257F17.b B6Ng01-257F17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattctctaactatgagggaatagccatgcaaagaaatactgcaa
tggtccctgtgtaggaagtcaggaagggcctacactactactgaaattac
aaaatcaccctcattagtgatccccaacccactctgggggacttagttca
caaaaatagaattattcattgaatttctgtcaaccagacattttataaaa
ggaagccagaatatatttttaaaggacagtatcaattatggttgttgact
gaaggtttttgtttgctagatgttaaaggaaattaaaagctgtcctataa
caatttatgaaaaatgccttttcaagtgtttgaaacctaaaaaggctcct
ttatcacacatattcctgacccataacagaggaatagcactaggatttct
actgaacctcagtcctagtatggaactaatggaataaaaaaacccatagg
atttactgcaatcaattcatgatctcattacaaaagcctagaagttcaat
gaaaaaaaattcagtgttatgtccatgtatgtatttaattcaaacatagt
ctgttcatagtcttctttgagtaaacatagaatataaaatgtaaaaaaaa
agtcttttactctacatgaacataatcattgcatgttatacataatgctt
caaggttaaatatttatgaatcaatactacaaactaagtgaaattttaat
attttcatctaatttagaaacttttgtttatatgtgtctgtaatccatac
actccacatggattatgcaatatattctttttccctttcttggtaatttc
ctataacgtagatagattattcttattttatatttcattataaaatgata
ctttgtttaaaatatagccataaacttgagcattgaaaccagataggcat
gactgtgagtgagcaagtaaaggttccctcaaaatacagtatagttaaat
aattatacttctgtcaaattatatattaataataatttgaacaatatgtt
taactcttttattttcaaactggcatcgtgaatacctttatgcttttatt
gagctccccatctatcagatatcggaaaccatcaggagtttggatggaaa
aaaaaaaaaactgcatggttcaaaaagtatgc
gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg
ctcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcatatcagtcagaatggctaagatcaaaaattcaggtgacagc
aaatgctggcaaggatgtggagaaagaggaacactccttcactgctggtg
ggattgcaagcttgtacaaccaaccactctggaaatcagtctggcggttc
ctcagaaaattggagatagtactaccggaggatcccgcaatacatctcct
gggcatatatccagaagatgccccaaccggtaagaaggacacaatggagt
actactcagctattaaaaagaatcaatttatgaaattcctaggcaaatgg
ttggacctggagggcatcatcctgctcacagtcagctgtgagtcagctca
cagggcccccaatggaggagctagagaaagcaaccaaggagctaaagaga
tctgcaaccctgtaggtggaaaatgaagccacaatatacccaaatatttg
ggacacaatgaaagcatttctaagaggaaaactcatagctctgagtgcct
ccaaaaagaaactatacagagcacacattagcagcttgacaacacaccta
aaagctctagaacaaaaggaagcaaattcacccaagaggagtagatggca
ggaaataatcaaactcaggggtgaaatcaaccaagtgaaaacaagaaaaa
ctattcaaagaatcaaccaaacgaggagctggttctttaagaaaatcaac
aagatagataaacccttagccagactcactagagggcacagggacagcat
cctaattaacaaaatcagaaatgaaaagggagacataacaacagatcatg
aagaaatccaaaacaccatcagatccttctacaaaaggctatactcaaca
aaactggagaacctggatgaaatggacaagtttctagacagaataccagt
accaaagttaaatcaggatcagataatgatctaaacagtcctatatcccc
taaagaaatagaagcagtcatatagtctccaacgaaaagccagaccagat
gtagtgcaaagtctatcagacttcaagaagattaatcagctctgccaacc
tattcccgatagaaagttaaagggaacctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_12081152_12082288
seq2: B6Ng01-257F17.b_50_1181 (reverse)

seq1  GCATACTTTTTTTGACCCATGCAGTTTTTTTTTTTTTTCATTCAAACTCC  50
      ||||||  ||||||| ||||||||||||||||||||| ||| |||||| |
seq2  GCATAC--TTTTTGAACCATGCAGTTTTTTTTTTTTTCCATCCAAACT-C  47

seq1  CTGATGGTTTCCCGATATCTGATAGATGGGGAGCCTCAATAAAAGGCATA  100
      |||||||||| |||||||||||||||||||||| |||||||||| |||||
seq2  CTGATGGTTT-CCGATATCTGATAGATGGGGAG-CTCAATAAAA-GCATA  94

seq1  AAGGTATTTCACGATGCCAGTTTGAAAAT-AAAGAGTTAAACATATTGTT  149
      |||||| |||||||||||||||||||||| ||||||||||||||||||||
seq2  AAGGTA-TTCACGATGCCAGTTTGAAAATAAAAGAGTTAAACATATTGTT  143

seq1  CAAATTATTATTAATATATAATTTGACAGAAGTATAATTATTTAACTATA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTATTATTAATATATAATTTGACAGAAGTATAATTATTTAACTATA  193

seq1  CTGTATTTTGAGGGAACC-TTACTTGCTCACTCACAGTCATGCCTATCTG  248
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTGTATTTTGAGGGAACCTTTACTTGCTCACTCACAGTCATGCCTATCTG  243

seq1  GTTTCAATGCTCAAGTTTATGGCTATATTTTAAACAAAGTATCATTTTAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAATGCTCAAGTTTATGGCTATATTTTAAACAAAGTATCATTTTAT  293

seq1  AATGAAATATAAAATAAGAATAATCTATCTACGTTATAGGAAATTACCAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATATAAAATAAGAATAATCTATCTACGTTATAGGAAATTACCAA  343

seq1  GAAAGGGAAAAAGAATATATTGCATAATCCATGTGGAGTGTATGGATTAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGAAAAAGAATATATTGCATAATCCATGTGGAGTGTATGGATTAC  393

seq1  AGACACATATAAACAAAAGTTTCTAAATTAGATGAAAATATTAAAATTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACATATAAACAAAAGTTTCTAAATTAGATGAAAATATTAAAATTTC  443

seq1  ACTTAGTTTGTAGTATTGATTCATAAATATTTAACCTTGAAGCATTATGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTTTGTAGTATTGATTCATAAATATTTAACCTTGAAGCATTATGT  493

seq1  ATAACATGCAATGATTATGTTCATGTAGAGTAAAAGACTTTTTTTTTACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATGCAATGATTATGTTCATGTAGAGTAAAAGACTTTTTTTTTACA  543

seq1  TTTTATATTCTATGTTTACTCAAAGAAGACTATGAACAGACTATGTTTGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATTCTATGTTTACTCAAAGAAGACTATGAACAGACTATGTTTGA  593

seq1  ATTAAATACATACATGGACATAACACTGAATTTTTTTTCATTGAACTTCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATACATACATGGACATAACACTGAATTTTTTTTCATTGAACTTCT  643

seq1  AGGCTTTTGTAATGAGATCATGAATTGATTGCAGTAAATCCTATGGGTTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTTGTAATGAGATCATGAATTGATTGCAGTAAATCCTATGGGTTT  693

seq1  TTTTATTCCATTAGTTCCATACTAGGACTGAGGTTCAGTAGAAATCCTAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTCCATTAGTTCCATACTAGGACTGAGGTTCAGTAGAAATCCTAG  743

seq1  TGCTATTCCTCTGTTATGGGTCAGGAATATGTGTGATAAAGGAGCCTTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTCCTCTGTTATGGGTCAGGAATATGTGTGATAAAGGAGCCTTTT  793

seq1  TAGGTTTCAAACACTTGAAAAGGCATTTTTCATAAATTGTTATAGGACAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTCAAACACTTGAAAAGGCATTTTTCATAAATTGTTATAGGACAG  843

seq1  CTTTTAATTTCCTTTAACATCTAGCAAACAAAAACCTTCAGTCAACAACC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATTTCCTTTAACATCTAGCAAACAAAAACCTTCAGTCAACAACC  893

seq1  ATAATTGATACTGTCCTTTAAAAATATATTCTGGCTTCCTTTTATAAAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGATACTGTCCTTTAAAAATATATTCTGGCTTCCTTTTATAAAAT  943

seq1  GTCTGGTTGACAGAAATTCAATGAATAATTCTATTTTTGTGAACTAAGTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGTTGACAGAAATTCAATGAATAATTCTATTTTTGTGAACTAAGTC  993

seq1  CCCCAGAGTGGGTTGGGGATCACTAATGAGGGTGATTTTGTAATTTCAGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGAGTGGGTTGGGGATCACTAATGAGGGTGATTTTGTAATTTCAGT  1043

seq1  AGTAGTGTAGGCCCTTCCTGACTTCCTACACAGGGACCATTGCAGTATTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTGTAGGCCCTTCCTGACTTCCTACACAGGGACCATTGCAGTATTT  1093

seq1  CTTTGCATGGCTATTCCCTCATAGTTAGAGAATGAATTC  1137
      |||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCATGGCTATTCCCTCATAGTTAGAGAATGAATTC  1132