BAC Information

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BAC

Clone NameB6Ng01-257F24
Chromosome1 (Build37)
Map Location 27,740,300 - 27,741,465
singlet/doubletsinglet
Overlap genenone
Upstream gene4931408C20Rik, LOC677427
Downstream geneLOC100040952, EG433281, EG665903
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257F24.bB6Ng01-257F24.g
ACCGA063092GA063093
length1,2161,148
definitionB6Ng01-257F24.b B6Ng01-257F24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaactgctttccaaatacaaagtccccaaatctacattcctccaa
acaaagacatggtcacagcaatacccaaatccttagtaccaactgttgtc
ttaaggtttcattgctgagaagagataccatgaacaaggcaactctaata
aagggaaacaactaactatagctagcttagagcttcagaaatttagttca
ttataatcattggtgggaagcatggcaccatgcagacagacatgttgctg
aaggaacaaagagctctacatcttggttaggcaaccagaagtactttact
ttctgcaggcacgcaggaggagagtctcttgtacattgagagaagcttga
gaataggagctctccaaacctgcctacacagtgacacacttccttcaaca
aagctacacctgctaatagtgccacttcccagaggctaagcaaactcaaa
ccaccacaatcataaaacagtctttagcttatggaatctaacaggcaatt
gtattgacttgaatggcaaatgtttgtcaggtgctcatgtattgaaagac
tttgtatctagtactatttcaggaaatgcctagaccctttaccaagagca
acatcgagagcagaagtgcattactagggcagggtttgaacttttatagc
tcatcttcacttaattgtctttgtttatttcctgtgtaaaagtgatcatc
tcccttcctagtcttgcagtagctcttttcctgcctatttatggccttcc
aagccatgaagaattatatgcatctagaaacatagtaatatagttcaaat
taaacctatcctctaagctacttttggtcatggtaacataacaaatacat
catttacaaacttaagagaacttaattaatttctatgtttaatatcttta
aaaagcaattatataattacacatgtaaacatcactacaaagagcatgat
ttttataaattgatttttataaataatattttaaattaaaatgaaatcta
taaattatattatgtttactctcatattctcattgattcttatttcatct
tgagaaaataataacgttacatcaactgtttactattgtgttattttctt
agtgatgggtcaaaggaaaataactaatatttcctttgcctacggtaaat
cctatcacttctttgtggcattcatccatacaatcagggccggttatatt
tttagaagatatattg

gaattctcatttcatgacaccagggaattttaataaggtaaggaaataac
tggcatgtttacattttaatctaaaagtcatctggcagtaatagaggttt
cttgtagtatattaaaatgcactgagaagcaggcctgcagagaccacacc
atatagagaatgagctgaaccatctcattacattcaattaggaaaagtta
gaaaggtaagcatagcaaatgagcctgtggaatatgcaaacagctccagg
ggaaagacaatgaatgaaaggatttctaaatgacaagcaagcactggtgc
tttggtaaaagacttgaatggcagttctcctagtctttaaatcataacta
attatattacttaaaaaaaaagtattaaaaagagggtaaaaaggatctaa
atttctcaaaacaagatgaatggttgttttcactctgggtatatgaagaa
tcatgccatttcagttaataaattttctatgcatttcccagtaaatcagc
cacatctagttttattaattttaataaagatgatgtagtagtttagcata
ggagaaaatataaataatagactctgtctcttaaaatagttcacctgatt
atgcattgtgttcaatctgactaatggatattgatgtctctgtattaatt
gtttaccacaactagttttctgaagtatggacattctagcattttctggg
atgttctgtttgcttatgtcccccaaaattccaaaacatcatgtctttgc
ctctctctgttgcagttggaaaatattctaaaatgtggacttagcagaga
aagttagactttatttatttctgcaaattatttgacttttagaatcacaa
ctattattttgttgcattatttcaaaaccgcataagacacatgtagcttg
ccatcctttacttactaccaaatacccagtttttattccattgtagttgt
ttcacaatatgtctctgcattgaaaaatggcccttgcttaatacatagtt
actccatagtcatgcattgtttctagatttctagctttttgatactttaa
ttgaatagtagatcttctctgttgttgactcatggttcacaggttaaaaa
tatcttcgaatttagtcttactctgtttcctggagaagccacgaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_27740300_27741465
seq2: B6Ng01-257F24.g_67_1214

seq1  GAATTCTCATTTCATGACACCAGGGAATTTTAATAAGGTAAGGAAATAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTTCATGACACCAGGGAATTTTAATAAGGTAAGGAAATAAC  50

seq1  TGGCATGTTTACATTTTAATCTAAAAGTCATCTGGCAGTAATAGAGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGTTTACATTTTAATCTAAAAGTCATCTGGCAGTAATAGAGGTTT  100

seq1  CTTGTAGTATATTAAAATGCACTGAGAAGCAGGCCTGCAGAGACCACACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAGTATATTAAAATGCACTGAGAAGCAGGCCTGCAGAGACCACACC  150

seq1  ATATAGAGAATGAGCTGAACCATCTCATTACATTCAATTAGGAAAAGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAGAATGAGCTGAACCATCTCATTACATTCAATTAGGAAAAGTTA  200

seq1  GAAAGGTAAGCATAGCAAATGAGCCTGTGGAATATGCAAACAGCTCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTAAGCATAGCAAATGAGCCTGTGGAATATGCAAACAGCTCCAGG  250

seq1  GGAAAGACAATGAATGAAAGGATTTCTAAATGACAAGCAAGCACTGGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGACAATGAATGAAAGGATTTCTAAATGACAAGCAAGCACTGGTGC  300

seq1  TTTGGTAAAAGACTTGAATGGCAGTTCTCCTAGTCTTTAAATCATAACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTAAAAGACTTGAATGGCAGTTCTCCTAGTCTTTAAATCATAACTA  350

seq1  ATTATATTACTTAAAAAAAAAGTATTAAAAAGAGGGTAAAAAGGATCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTACTTAAAAAAAAAGTATTAAAAAGAGGGTAAAAAGGATCTAA  400

seq1  ATTTCTCAAAACAAGATGAATGGTTGTTTTCACTCTGGGTATATGAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCAAAACAAGATGAATGGTTGTTTTCACTCTGGGTATATGAAGAA  450

seq1  TCATGCCATTTCAGTTAATAAATTTTCTATGCATTTCCCAGTAAATCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCCATTTCAGTTAATAAATTTTCTATGCATTTCCCAGTAAATCAGC  500

seq1  CACATCTAGTTTTATTAATTTTAATAAAGATGATGTAGTAGTTTAGCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTAGTTTTATTAATTTTAATAAAGATGATGTAGTAGTTTAGCATA  550

seq1  GGAGAAAATATAAATAATAGACTCTGTCTCTTAAAATAGTTCACCTGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAATATAAATAATAGACTCTGTCTCTTAAAATAGTTCACCTGATT  600

seq1  ATGCATTGTGTTCAATCTGACTAATGGATATTGATGTCTCTGTATTAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTGTGTTCAATCTGACTAATGGATATTGATGTCTCTGTATTAATT  650

seq1  GTTTACCACAACTAGTTTTCTGAAGTATGGACATTCTAGCATTTTCTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACCACAACTAGTTTTCTGAAGTATGGACATTCTAGCATTTTCTGGG  700

seq1  ATGTTCTGTTTGCTTATGTCCCCCAAAATTCCAAAACATCATGTCTTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTGTTTGCTTATGTCCCCCAAAATTCCAAAACATCATGTCTTTGC  750

seq1  CTCTCTCTGTTGCAGTTGGAAAATATTCTAAAATGTGGACTTAGCAGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTGTTGCAGTTGGAAAATATTCTAAAATGTGGACTTAGCAGAGA  800

seq1  AAGTTAGACTTTATTTATTTCTGCAAATTATTTGACTTTTAGAATCACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGACTTTATTTATTTCTGCAAATTATTTGACTTTTAGAATCACAA  850

seq1  CTATTATTTTGTTGCATTATTTCAAAACCGCATAAGACACATGTAGCTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATTTTGTTGCATTATTTCAAAACCGCATAAGACACATGTAGCTTG  900

seq1  CCATCCTTTACTTACTACCAAATACCCAG-TTTTATTCCATTGTAGTTGT  949
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCATCCTTTACTTACTACCAAATACCCAGTTTTTATTCCATTGTAGTTGT  950

seq1  TTCACAATATGTCTCCTGCATTGAAAAATGGCCCTTGCTTAATACATAGT  999
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTCACAATATGTCT-CTGCATTGAAAAATGGCCCTTGCTTAATACATAGT  999

seq1  TACTCCCATAGTTCATGCATTGTTTCTAGAATTTCTAGCTTTTTGATAAC  1049
      |||| |||||| ||||||||||||||||| ||||||||||||||||||  
seq2  TACT-CCATAG-TCATGCATTGTTTCTAG-ATTTCTAGCTTTTTGATA--  1044

seq1  TTTTAATTGAATTAGTTAGATCCTTTCTTCCTGTTTGTTTGACTTCAATT  1099
       |||||||||| ||| ||||||  ||||  |||||   ||||| |||  |
seq2  CTTTAATTGAA-TAG-TAGATC--TTCT--CTGTT--GTTGAC-TCA--T  1083

seq1  GTTTCACAGTTTTAAAAATATCTTTCCAATATAATTCTTTACTCT-TTTT  1148
      | |||||||  ||||||||||| ||| ||| || |   ||||||| ||| 
seq2  GGTTCACAG-GTTAAAAATATC-TTCGAATTTAGT--CTTACTCTGTTTC  1129

seq1  CTTGAG-AGCCACGAAGAA  1166
      || ||| ||||||||||||
seq2  CTGGAGAAGCCACGAAGAA  1148


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