MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-257L11
Chromosome	1 (Build37)
Map Location	3,696,117 - 3,697,312
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Xkr4, LOC100038975, LOC664792
Downstream gene	LOC619785, Rp1h, Sox17, LOC664830, LOC664838, LOC664853, LOC619596, EG619980
Link	Open Mouse BAC browser

Click to get alignment info.

name	Xkr4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:497097 MGI:3528744
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100038975 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038975
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC664792 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	LOC619785 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619785
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Rp1h (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19888 MGI:1341105
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sox17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20671 MGI:107543
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC664830 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664830
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins pseudo : _no_value

name	LOC664838 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664838
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC664853 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664853
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC619596 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619596
definition	note : glioma tumor suppressor candidate region gene 2 pseudogene pseudo : _no_value

name	EG619980 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619980 MGI:3644547
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	Xkr4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:59858538 GeneID:497097 MGI:3528744
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : X Kell blood group precursor related family member 4 transcript_id : NM_001011874.1

name	LOC100038975 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233582 GeneID:100038975
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100038975 transcript_id : XM_001472020.1

name	Rp1h (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33468922 GeneID:19888 MGI:1341105
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinitis pigmentosa 1 homolog (human) transcript_id : NM_011283.1

name	Sox17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802575 GeneID:20671 MGI:107543
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SRY-box containing gene 17 transcript_id : NM_011441.3

name	Xkr4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:59858539 CCDS:CCDS14803.1 GeneID:497097 MGI:3528744
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : XK-related protein 4 protein_id : NP_001011874.1

name	LOC100038975 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233583 GeneID:100038975
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472070.1

name	Rp1h (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468923 CCDS:CCDS14804.1 GeneID:19888 MGI:1341105
definition	GO_component : GO:0005929 - cilium [Evidence IDA]; GO:0005625 - soluble fraction [Evidence IDA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 note : oxygen-regulated protein 1 product : retinitis pigmentosa 1 homolog protein_id : NP_035413.1

name	Sox17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755604 CCDS:CCDS14805.1 GeneID:20671 MGI:107543
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : SRY-box 17 protein_id : NP_035571.1

name	LOC619785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619785
definition	number : 5 pseudo : _no_value

name	LOC619785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619785
definition	number : 4 pseudo : _no_value

name	LOC619785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619785
definition	number : 3 pseudo : _no_value

name	LOC619785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619785
definition	number : 2 pseudo : _no_value

name	LOC619785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619785
definition	number : 1 pseudo : _no_value

name	LOC664838 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664838
definition	number : 2 pseudo : _no_value

name	LOC664838 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664838
definition	number : 1 pseudo : _no_value

name	LOC664853 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664853
definition	number : 1 pseudo : _no_value

name	LOC664853 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664853
definition	number : 2 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128840
definition	standard_name : D1Mit475

name	(CDS detail)
type	STS
link
xref	UniSTS:125374
definition	standard_name : MHAa84a2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128586
definition	standard_name : D1Mit242.1

name	(CDS detail)
type	STS
link
xref	UniSTS:128585
definition	standard_name : D1Mit242

name	(CDS detail)
type	STS
link
xref	UniSTS:158773
definition	standard_name : 36.MMHAP82FRD12.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:270413
definition	standard_name : PMC122834P1

name	(CDS detail)
type	STS
link
xref	UniSTS:471102
definition	standard_name : Sox17

name	(CDS detail)
type	STS
link
xref	UniSTS:162931
definition	standard_name : RH126223

name	(CDS detail)
type	STS
link
xref	UniSTS:128794
definition	standard_name : D1Mit427

name	LOC664792 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233581 GeneID:664792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to Solute carrier family 35, member E3 pseudo : _no_value transcript_id : XR_030515.1

name	LOC664830 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233584 GeneID:664830
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : hypothetical LOC664830 pseudo : _no_value transcript_id : XR_030593.1

name	EG619980 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149233585 GeneID:619980 MGI:3644547
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : predicted gene, EG619980 pseudo : _no_value transcript_id : XR_030641.1

clone name	MSMg01-147H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105M15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-300N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488G14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-128C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002A15
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-257L11.b	B6Ng01-257L11.g
ACC	GA063343	GA063344
length	1,193	1,202
definition	B6Ng01-257L11.b	B6Ng01-257L11.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcaaccgagtaattctcaccccttgtagcaagagaagtattaca gaggagttacaaggataccattccacacacaaaactttctacccaatatt tatcctgtctacaagaaatgcagggatggaggatggaagagagactaagg gaatgtccaaccaataacttaagatccatcacatgggtaagcaccaatcc ctgacactatttatgatactctgttatgcttgcagacaggagtctagcat agctgtcctctgagaagttccacccaccagctggctcagaagaatgcagg gacacacagccaaacagtgcatggagcttggggacccttatggaagaatt gggggaggattgtgggccccaaaatggataggaactccacaggaagatga gcagagtcaagtaacctagacccttggggctctcagtgtctgaaccatta accaaaaaacatacgtcggatggacttagggccccctggaaatatgtaga tgtatgtcttggtcttcatgtggatactgaacaactagaacaggtcccat cctaatacctgttacttgtctgtggaatatgttctagctggcctgccttg tctggcctcagtgggaggaaatgtgcctagtactgcagagacttgatgtg ccagggtgtggaggggataaccagggggctctaccctttcacaggaaaag aggagaggggagcaggaagggttgtgggagggcgtggccaggaagggggt cagtaagaaggttgtaaagtgaacaaataaaaataaataaaataaaacat gcaaaccaaatccaagaacacatcaaaaagattatctaccatgatcaatt aggtttcatcccagataggcagggatagttcaatatatgtaaatcaataa acataatcataaaccatataaacagaatgaaagacaaaaaccacatggct atctcattagatgtataaagggcctctgacaaaattcaacacattttcat gaaaagttattagtgagatctgaagaatacaaggggcatatctggaacat atagccaaacttagagcaggaccatagccagcattcactcaatggaagaa tacctcattttctcccttaaattagggaaatagaacagggtggacacttt cttcatgtcctaatcaagaactgtacttgaagtctaagctctg	gaattcattagcaatctgcctattcaaaactacgcttgtgttgaatgcat gattggcatttgctcacttactccaaagatgtgagactccttagggaggc ttcactgtgtaggaagtccacatgccatccattatgtatctacagcctgc ttagttgaaccaaactctcatctatctccactcctgtaagtgattttacc agagaccacaattctctttgttcttgatcctgtgtgaagcaattacattt aaatttcatgaatttagaaatcaaaatccaaattttaatagagaaattac tttgctagtctttttatgcttttcaatttaattgtgtacattaattttat gtacatttcttatatatttatgcagtttcttaaggtatttccagcattgc aaataatatctgtatattttggtaagttcttgactagctattatttgttt attatcaccttaaatattgtcaaatctaatttaattcaataaaattcaaa ttcttctaggaatatcacatttttaattcttcatgacaagtcaacacgtc ctttattatatattcagactttatcggcaacacactagtgtagttttgaa ttgataggagtattaaaacttgaaatacctgttgtatttttgtctggatg ctgttgaatgcttttgtttctgtcgcatgtttttaatatttttctggttt tttaaagtataatatgattaaatgtaagagagaaaatgattatccctata tttcaatttttttgaatcctacctgaaacagatagtgagtttattttcaa aagtttaaacttcatggcaaatttatttataagcctaaaatacacagact tttgtaacataataaaaaataaaggaatacaaatacattttatatgatgg catgttaggttctctgtaagattcgtcttatagcattcatatgttataaa ggtagattagtagtatatgcaatacacatatatgagtgtgcacgtttccc ctgaaatgtaacattctcctgttttttttctagctgaatatatccatgca aagtacagttgagttccagtgggatccttgatatatttattatataaaaa gaccttcccgaaatatggtaaacctggtataattaagagagttccataag aatacacagtataacctacactctaaatatataaggtaaccttagagaaa ac
quality values	Open. Hide. 58 33 33 38 62 62 62 41 42 47 62 62 62 62 62 47 56 56 47 62 62 62 44 51 62 62 62 62 62 62 62 59 51 45 59 45 27 43 38 34 54 59 62 62 62 59 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 59 59 62 62 62 59 59 62 62 62 62 62 59 62 62 54 62 62 62 62 62 59 62 62 62 59 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 59 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 49 58 58 54 52 54 58 54 58 58 58 54 58 58 58 58 58 43 58 58 58 54 58 58 49 58 54 58 58 58 58 49 58 54 54 46 52 54 58 58 58 58 36 58 58 58 54 47 58 47 58 58 58 54 54 54 47 54 51 54 58 54 51 46 58 42 42 51 52 58 51 49 47 58 51 58 48 45 34 41 58 58 47 58 53 51 58 51 50 58 58 49 42 24 50 41 32 58 50 48 49 58 58 54 50 54 51 51 50 48 58 44 49 54 58 47 39 53 53 40 46 58 58 58 53 50 58 29 58 58 32 46 26 58 58 51 51 31 51 49 21 58 39 43 30 58 40 39 53 53 53 53 58 50 49 25 58 43 32 41 41 49 35 41 50 37 50 36 54 49 11 49 54 39 41 34 37 40 37 40 40 49 32 44 49 16 46 22 53 53 32 39 49 33 42 42 53 52 30 35 39 54 47 53 32 54 54 54 37 29 18 54 54 51 51 54 54 33 25 46 54 54 44 40 40 53 53 53 38 54 38 42 47 38 51 46 37 37 51 18 28 37 38 32 29 15 35 29 32 26 33 52 51 51 35 16 53 32 26 35 28 42 33 23 10 18 24 31 32 36 35 34 30 32 32 30 18 14 31 26 46 45 31 26 18 11 46 32 31 31 42 33 24 31 51 25 28 22 46 28 14 28 32 28 35 43 36 34 36 43 21 34 32 32 31 31 33 46 22 31 32 23 27 25 18 46 7 22 13 12 19 25 43 41 18 42 23 46 30 32 33 10 11 14 31 21 41 22 18 6 23 22 17 27 27 32 37 26 30 27 21 26 46 44 46 27 31 34 25 31 19 33 26 31 12 30 35 32 32 33 36 14 7 29 20 17 31 13 26 25 33 10 24 41 9 19 44 20 8 5 21 21 21 31 31 10 7 36 31 31 18 27 27 19 25 31 8 14 9 29 40 27 19 21 21 32 32 18 36 32 29 7 5 8 17 11 27 8 9 18 30 20 19 22 31 13 32 10 12 7 5 13 5 6 7 15 8 7 13 29 39 32 22 12 15 6 5 4 3 3 9 29 18 25 5 7 12 8 9 6 9 8 9 27 11 12 17 16 6 7 23 27 26 10 16 7 16 9 24 9 6 5 13 24 24 7 27 8 7 15 14 16 7 25 30 6 7 14 18 27 28 15 7 9 21 5 4 2 2 6 18 10 18 17 28 14 3 6 15 10 18 22 7 6 17 26 24 7 4 24 9 23 8 16 22 16 5 18 5 14 4 4 11 15 30 5 21 9 8 21 5 4 8 17 28 9 10 11 17 7 4 7 25 8 7 7 7 7 9 8 22 4 6 5 7 14 5 6 16 4 3 4 8 9 5 13 6 2 2 3 6 7 6 6 15 10 8 5 15	Open. Hide. 62 59 59 59 62 59 59 62 59 59 62 59 56 56 49 62 59 62 43 54 59 59 62 62 59 39 62 62 62 62 59 59 62 62 54 54 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 54 49 42 62 62 59 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 52 58 58 58 58 58 58 58 58 58 54 58 58 58 58 54 58 58 58 58 58 58 54 54 54 54 54 54 58 58 58 58 58 46 54 58 52 58 58 58 54 58 58 58 58 58 50 58 58 53 58 58 58 58 54 58 54 58 58 58 53 58 58 58 58 58 58 54 49 58 58 51 53 54 58 58 58 52 58 49 42 53 53 58 58 58 54 54 58 58 58 58 41 46 51 46 58 58 58 58 58 58 51 52 47 58 58 58 58 58 53 52 51 58 58 51 41 58 50 51 58 49 49 49 58 58 50 58 41 58 58 58 58 58 42 58 49 50 52 51 34 53 53 53 53 51 58 53 58 58 58 31 49 49 50 52 52 58 54 54 51 52 41 54 54 32 54 49 54 54 51 31 54 51 49 49 32 53 51 51 51 39 49 51 53 42 52 37 54 44 47 53 31 32 50 40 54 37 53 40 54 54 54 42 42 53 41 26 51 44 45 33 54 54 39 45 41 42 42 54 53 37 31 42 45 54 54 54 54 54 39 31 29 45 34 51 40 32 31 32 47 32 53 53 53 32 34 29 32 53 31 33 32 32 42 31 32 42 49 28 32 32 51 51 31 31 23 52 51 35 34 38 51 31 31 51 30 30 30 42 32 29 26 29 44 30 51 51 26 30 51 38 39 37 51 36 35 43 28 46 31 31 40 30 31 51 46 30 25 28 31 31 30 31 31 38 32 38 48 48 31 31 23 33 29 31 29 31 27 27 31 31 48 48 46 46 30 30 13 46 8 28 21 41 32 30 31 36 31 48 27 30 25 27 21 27 46 46 26 36 31 35 31 23 31 29 37 32 31 34 32 41 16 31 31 24 16 23 31 31 32 31 31 38 31 37 33 24 29 16 24 24 20 27 33 34 32 27 15 22 22 31 23 34 20 33 19 33 31 32 37 22 21 33 31 14 41 7 34 32 22 36 16 32 20 31 31 26 33 32 27 32 31 15 19 32 34 34 17 22 25 21 31 22 18 22 34 26 19 22 23 31 32 13 19 21 9 20 27 21 33 21 32 43 31 22 34 29 17 14 22 22 43 30 28 34 21 34 9 7 11 3 5 6 12 7 18 12 17 7 30 38 34 38 38 34 10 24 20 24 24 28 16 16 24 6 3 3 7 6 16 3 8 16 16 9 6 3 27 18 16 13 20 6 4 5 3 6 15 20 10 12 12 26 26 9 25 5 11 34 11 3 8 9 15 5 7 5 3 3 5 11 5 3 15 13 6 16 7 12 6 5 11 6 9 28 21 19 8 11 8 6 17 16 8 21 2 2 3 7 7 8 5 6 8 12 2 9 17 20 6 6 7 7 7 6 5 6 7 13 7 13 5 9 5 11 6 6 4 6 7 6 5 1 3 4 10 4 7 6 11 4 6 3 3 4 5 1 5 6 6 12 5 5 17 7 5 8 5 6 4 11 10 17 7 7 4 7 19 6 5 8 5 6 4 5 5 25 6 4 7 5 8 19 5 7 30 16 18 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_3696117_3697312
seq2: B6Ng01-257L11.g_63_1264 (reverse)

seq1  GTTTTCT---AGGTTACTTATTATATTTAGA-TGTAGTTTATACTGTGTA  46
      |||||||   ||||||| |  |||||||||| ||||| ||||||||||||
seq2  GTTTTCTCTAAGGTTACCTTATATATTTAGAGTGTAGGTTATACTGTGTA  50

seq1  TCTTTATGGAACTCT-TAAATTATA-CAGTTTTACCATATTTTGGGAA-G  93
      |  |||||||||||| | ||||||| ||| |||||||||||| ||||| |
seq2  TTCTTATGGAACTCTCTTAATTATACCAGGTTTACCATATTTCGGGAAGG  100

seq1  TC-TTTTATATAATAAATTAATAATCCAGGATCCCACTGG-ACTCACCTT  141
      || |||||||||||||||  || ||| ||||||||||||| ||||| | |
seq2  TCTTTTTATATAATAAAT--AT-ATCAAGGATCCCACTGGAACTCAAC-T  146

seq1  GTACTTTGGCATGGAATATA-TCAGCTAG-AAAAAAACAGGAGAATTGTT  189
      ||||||| |||||| ||||| |||||||| ||||||||||||||| ||||
seq2  GTACTTT-GCATGG-ATATATTCAGCTAGAAAAAAAACAGGAGAA-TGTT  193

seq1  ACATTTCAGGGGAAACGTGCACACTCATATATGTGTATTGCATATACTAC  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCAGGGGAAACGTGCACACTCATATATGTGTATTGCATATACTAC  243

seq1  TAATCTACC-TTATAACATATGAATGCTATAAGACGAATCTTACAGAGAA  288
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTACCTTTATAACATATGAATGCTATAAGACGAATCTTACAGAGAA  293

seq1  CCTAACATGCCATCATATAAAATGTATTTGTATTCC-TTATTTTTTATTA  337
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCTAACATGCCATCATATAAAATGTATTTGTATTCCTTTATTTTTTATTA  343

seq1  TGTTACAAAAGTCTGTGTATTTTAGGCTTATAAATAAATTTGCCATGAAG  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACAAAAGTCTGTGTATTTTAGGCTTATAAATAAATTTGCCATGAAG  393

seq1  TTTAAACTTTTGAAAATAAACTCACTATCTGTTTCAGGTAGGATTCAAAA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACTTTTGAAAATAAACTCACTATCTGTTTCAGGTAGGATTCAAAA  443

seq1  AAATTGAAATATAGGGATAATCATTTTCTCTCTTACATTTAATCATATTA  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAAATATAGGGATAATCATTTTCTCTCTTACATTTAATCATATTA  493

seq1  TACTTTAAAAAACCAGAAAAATATTAAAAACATGCGACAGAAACAAAAGC  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAAAAAACCAGAAAAATATTAAAAACATGCGACAGAAACAAAAGC  543

seq1  ATTCAACAGCATCCAGACAAAAATACAACAGGTATTTCAAGTTTTAATAC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACAGCATCCAGACAAAAATACAACAGGTATTTCAAGTTTTAATAC  593

seq1  TCCTATCAATTCAAAACTACACTAGTGTGTTGCCGATAAAGTCTGAATAT  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATCAATTCAAAACTACACTAGTGTGTTGCCGATAAAGTCTGAATAT  643

seq1  ATAATAAAGGACGTGTTGACTTGTCATGAAGAATTAAAAATGTGATATTC  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAAGGACGTGTTGACTTGTCATGAAGAATTAAAAATGTGATATTC  693

seq1  CTAGAAGAATTTGAATTTTATTGAATTAAATTAGATTTGACAATATTTAA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAGAATTTGAATTTTATTGAATTAAATTAGATTTGACAATATTTAA  743

seq1  GGTGATAATAAACAAATAATAGCTAGTCAAGAACTTACCAAAATATACAG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATAATAAACAAATAATAGCTAGTCAAGAACTTACCAAAATATACAG  793

seq1  ATATTATTTGCAATGCTGGAAATACCTTAAGAAACTGCATAAATATATAA  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATTTGCAATGCTGGAAATACCTTAAGAAACTGCATAAATATATAA  843

seq1  GAAATGTACATAAAATTAATGTACACAATTAAATTGAAAAGCATAAAAAG  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTACATAAAATTAATGTACACAATTAAATTGAAAAGCATAAAAAG  893

seq1  ACTAGCAAAGTAATTTCTCTATTAAAATTTGGATTTTGATTTCTAAATTC  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCAAAGTAATTTCTCTATTAAAATTTGGATTTTGATTTCTAAATTC  943

seq1  ATGAAATTTAAATGTAATTGCTTCACACAGGATCAAGAACAAAGAGAATT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTTAAATGTAATTGCTTCACACAGGATCAAGAACAAAGAGAATT  993

seq1  GTGGTCTCTGGTAAAATCACTTACAGGAGTGGAGATAGATGAGAGTTTGG  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTCTGGTAAAATCACTTACAGGAGTGGAGATAGATGAGAGTTTGG  1043

seq1  TTCAACTAAGCAGGCTGTAGATACATAATGGATGGCATGTGGACTTCCTA  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTAAGCAGGCTGTAGATACATAATGGATGGCATGTGGACTTCCTA  1093

seq1  CACAGTGAAGCCTCCCTAAGGAGTCTCACATCTTTGGAGTAAGTGAGCAA  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGAAGCCTCCCTAAGGAGTCTCACATCTTTGGAGTAAGTGAGCAA  1143

seq1  ATGCCAATCATGCATTCAACACAAGCGTAGTTTTGAATAGGCAGATTGCT  1187
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAATCATGCATTCAACACAAGCGTAGTTTTGAATAGGCAGATTGCT  1193

seq1  AATGAATTC  1196
      |||||||||
seq2  AATGAATTC  1202

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information