BAC Information

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BAC

Clone NameB6Ng01-257L16
Chromosome1 (Build37)
Map Location 36,921,947 - 37,060,476
singlet/doubletdoublet
Overlap geneTmem131, EG241053
Upstream geneLOC666283, LOC100041091, EG666290, Hs6st1, Ugcgl1, LOC100041123, Lincr, Arid5a, 4632411B12Rik, 4930533C12Rik, Lman2l, Cnnm4, Cnnm3, Ankrd23, Ankrd39, Sema4c, 1700024G10Rik, BC050210, EG623414, Cox5b, Actr1b, 4933424G06Rik, Zap70
Downstream geneA230074B11Rik, 4921511C04Rik, Cnga3, Inpp4a, 6330578E17Rik, Unc50, Mgat4a, 2010300C02Rik, Tsga10, EG623661, Mitd1, Mrpl30, Gm776, 2300002O18Rik, Txndc9, EG666434, Eif5b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257L16.bB6Ng01-257L16.g
ACCGA063351GA063352
length1,041636
definitionB6Ng01-257L16.b B6Ng01-257L16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,921,947 - 36,922,986)(37,059,944 - 37,060,476)
sequence
gaattcccttacatgtgtcctcatacccctagctagtctgggtcatatct
ctctgtaaactgaccctaaatgagaatggaaatgttatatccaacttaaa
cagaatttgctcctgtgccagggacatgctcactttgcccacaggttgaa
caactgaaaagaaagcttaacacttattaacaaaaacaaacaaacatggg
cggggttgctagaggtaggcaggtgtcctcaggcaacaggcaggtagcct
acagcagctcttctacagtggtgctctgacctcatgcttcctacttagta
cccacttaagaaatgcaggagtgtttggaggcagaaagaaaatagatcaa
tgcgggaaaaattctgattaactaacaatgtctatgtttctatgagtgga
ggaaaaaccctaactcaaagaggacatgaacaagtatagtaactgtctac
ttcctgaagccacttaggaataactttttcctctctcttttattttaata
atctttttattaaaatatataataaaaatatatttttttcttttctctct
ttatctttttaatcatattcaacacaatatattttataccaatcttaaaa
atgatggacatgttattaaatgaacataaaatgataaggccttttttttg
tttggttttagtagagcttaaaatcttggctcttaatgtggtacaaaaca
aaaatgagaacaatttttagacattggagttcattttattacaatgtact
tcaatgtccctcacatcacgaaaggattctacctccattgtagctaagct
aagagttgacagttctgctgcgccaaggaatgaattgtaggtatgatttt
tggatacagatttcctgctatggtcgaagctatttgacttgagtgactgt
tgtccttcacagcttgcagggaacaggttacattcattttaagaaatggt
gtgtgtattgagatggtctatccatgaagtcattcatcaactgttcaatg
aacaatggctctgcctggaggtggcacagacttcaggtgga
gaattcttgtctacatcatacgctttgtcctctgtcccctagcctgtagt
tattagagtgagattatgtgacatcaaatgccgctgcattggtggctggg
cccagcagacagcttccagatgattccagaatgtcctccattgcttctgt
tgggtgatcactgaaataaaagcacaagagtttaatattttctcctaagt
gccaggcggtggtagcacacctttagtcccagcactcaggagacagaagc
attcagatttctgagttcaaggccagcctggtctacagaatcttgtcaga
gttgtctctctcctttcattaggtgatagatcagttcaatctaggcatat
agcttatgaatataactgggttatgtattttttatacaggcttattggga
taagaaattacctgggctggagagatggctcagcggttaagagcactgac
tgctcttccagaagtccagagttcaattcccagcaaacacatggtggctc
acgaccatctgtaatgggatccgatgccctcctctggtgtgtctgaagac
agctacagtgtactcatataaataagatgtataaatgtttaaaaaaaaaa
gggggaaggaaggaagggacggagggagggatggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_36921947_36922986
seq2: B6Ng01-257L16.b_46_1084

seq1  GAATTCCCTTACATGTGTCCTCATACCCCTAGCTAGTCTGGGTCATATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTACATGTGTCCTCATACCCCTAGCTAGTCTGGGTCATATCT  50

seq1  CTCTGTAAACTGACCCTAAATGAGAATGGAAATGTTATATCCAACTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTAAACTGACCCTAAATGAGAATGGAAATGTTATATCCAACTTAAA  100

seq1  CAGAATTTGCTCCTGTGCCAGGGACATGCTCACTTTGCCCACAGGTTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTTGCTCCTGTGCCAGGGACATGCTCACTTTGCCCACAGGTTGAA  150

seq1  CAACTGAAAAGAAAGCTTAACACTTATTAACAAAAACAAACAAACATGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGAAAAGAAAGCTTAACACTTATTAACAAAAACAAACAAACATGGG  200

seq1  CGGGGTTGCTAGAGGTAGGCAGGTGTCCTCAGGCAACAGGCAGGTAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGTTGCTAGAGGTAGGCAGGTGTCCTCAGGCAACAGGCAGGTAGCCT  250

seq1  ACAGCAGCTCTTCTACAGTGGTGCTCTGACCTCATGCTTCCTACTTAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGCTCTTCTACAGTGGTGCTCTGACCTCATGCTTCCTACTTAGTA  300

seq1  CCCACTTAAGAAATGCAGGAGTGTTTGGAGGCAGAAAGAAAATAGATCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTAAGAAATGCAGGAGTGTTTGGAGGCAGAAAGAAAATAGATCAA  350

seq1  TGCGGGAAAAATTCTGATTAACTAACAATGTCTATGTTTCTATGAGTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGGAAAAATTCTGATTAACTAACAATGTCTATGTTTCTATGAGTGGA  400

seq1  GGAAAAACCCTAACTCAAAGAGGACATGAACAAGTATAGTAACTGTCTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAACCCTAACTCAAAGAGGACATGAACAAGTATAGTAACTGTCTAC  450

seq1  TTCCTGAAGCCACTTAGGAATAACTTTTTCCTCTCTCTTTTATTTTAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAAGCCACTTAGGAATAACTTTTTCCTCTCTCTTTTATTTTAATA  500

seq1  ATCTTTTTATTAAAATATATAATAAAAATATATTTTTTTCTTTTCTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTATTAAAATATATAATAAAAATATATTTTTTTCTTTTCTCTCT  550

seq1  TTATCTTTTTAATCATATTCAACACAATATATTTTATACCAATCTTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTTTAATCATATTCAACACAATATATTTTATACCAATCTTAAAA  600

seq1  ATGATGGACATGTTATTAAATGAACATAAAATGATAAGGCCTTTTTTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGACATGTTATTAAATGAACATAAAATGATAAGGCCTTTTTTTTG  650

seq1  TTTGGTTTTAGTAGAGCTTAAAATCTTGGCTCTTAATGTGGTACAAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTTAGTAGAGCTTAAAATCTTGGCTCTTAATGTGGTACAAAACA  700

seq1  AAAATGAGAACAATTTTTAGACATTGGAGTTCATTTTATTACAATGTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAGAACAATTTTTAGACATTGGAGTTCATTTTATTACAATGTACT  750

seq1  TCAATGTCCCTCACATCACGAAAGGATTCTACCTCCATTGTAGCTAAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTCCCTCACATCACGAAAGGATTCTACCTCCATTGTAGCTAAGCT  800

seq1  AAGAGTTGACAGTTCTGCTGCGCCAAGGAATGAATTGTAGGTATGATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTGACAGTTCTGCTGCGCCAAGGAATGAATTGTAGGTATGATTTT  850

seq1  TGGATACAGATTTCCTGCTATGGTCGAAGCTATTTGACTTGAGTGACTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACAGATTTCCTGCTATGGTCGAAGCTATTTGACTTGAGTGACTGT  900

seq1  TGTCCTTCACAGCTTGCAGGGAACAGGTTACATTCA-TTTAAGAAATGGT  949
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGTCCTTCACAGCTTGCAGGGAACAGGTTACATTCATTTTAAGAAATGGT  950

seq1  GTGTGTATTGAGATGGTCTATCCATGAAGTCATTCATCAACTGTTTCAAT  999
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTGTGTATTGAGATGGTCTATCCATGAAGTCATTCATCAACTG-TTCAAT  999

seq1  GAACAATGGCTCTGCTTGGAGGGTGGCACAGACTTCAGGTG  1040
      ||||||||||||||| |||| ||||||||||||||||||||
seq2  GAACAATGGCTCTGCCTGGA-GGTGGCACAGACTTCAGGTG  1039

seq1: chr1_37059944_37060476
seq2: B6Ng01-257L16.g_173_705 (reverse)

seq1  CTCCATCCCTCCCTCCGTCCCTTCCTTCCTTCCCCCTTTTTTTTTTAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCCCTCCCTCCGTCCCTTCCTTCCTTCCCCCTTTTTTTTTTAAAC  50

seq1  ATTTATACATCTTATTTATATGAGTACACTGTAGCTGTCTTCAGACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATACATCTTATTTATATGAGTACACTGTAGCTGTCTTCAGACACAC  100

seq1  CAGAGGAGGGCATCGGATCCCATTACAGATGGTCGTGAGCCACCATGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAGGGCATCGGATCCCATTACAGATGGTCGTGAGCCACCATGTGT  150

seq1  TTGCTGGGAATTGAACTCTGGACTTCTGGAAGAGCAGTCAGTGCTCTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGGAATTGAACTCTGGACTTCTGGAAGAGCAGTCAGTGCTCTTAA  200

seq1  CCGCTGAGCCATCTCTCCAGCCCAGGTAATTTCTTATCCCAATAAGCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTGAGCCATCTCTCCAGCCCAGGTAATTTCTTATCCCAATAAGCCTG  250

seq1  TATAAAAAATACATAACCCAGTTATATTCATAAGCTATATGCCTAGATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAAATACATAACCCAGTTATATTCATAAGCTATATGCCTAGATTG  300

seq1  AACTGATCTATCACCTAATGAAAGGAGAGAGACAACTCTGACAAGATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATCTATCACCTAATGAAAGGAGAGAGACAACTCTGACAAGATTCT  350

seq1  GTAGACCAGGCTGGCCTTGAACTCAGAAATCTGAATGCTTCTGTCTCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACCAGGCTGGCCTTGAACTCAGAAATCTGAATGCTTCTGTCTCCTG  400

seq1  AGTGCTGGGACTAAAGGTGTGCTACCACCGCCTGGCACTTAGGAGAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGGGACTAAAGGTGTGCTACCACCGCCTGGCACTTAGGAGAAAAT  450

seq1  ATTAAACTCTTGTGCTTTTATTTCAGTGATCACCCAACAGAAGCAATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACTCTTGTGCTTTTATTTCAGTGATCACCCAACAGAAGCAATGGA  500

seq1  GGACATTCTGGAATCATCTGGAAGCTGTCTGCT  533
      |||||||||||||||||||||||||||||||||
seq2  GGACATTCTGGAATCATCTGGAAGCTGTCTGCT  533